Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 2.9e-101 372.5 275 100.0
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 3.9e-50 202.6 276 71.4
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 8.7e-50 201.4 280 63.9
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 2.4e-47 193.4 277 70.0
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.2e-46 191.0 279 69.5
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.3e-45 187.6 284 68.0
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.9e-45 185.7 279 67.7
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 1.1e-44 184.5 281 64.8
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.1e-44 184.5 282 67.4
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.9e-44 183.7 279 65.6
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 2.5e-44 183.3 282 69.5
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 3.2e-44 183.0 278 65.1
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 1.2e-43 181.0 280 66.4
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.6e-43 180.6 282 66.3
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.1e-43 180.3 277 67.5
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.8e-42 177.2 281 60.9
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.3e-42 176.8 281 60.9
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 3.0e-42 176.4 283 66.4
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 3.3e-41 172.9 282 59.9
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 7.4e-41 171.8 276 61.6
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 4.8e-40 169.1 238 73.1
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 4.8e-40 169.1 278 66.5
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.1e-39 167.9 278 65.8
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 1.4e-39 167.5 278 64.4
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.8e-39 167.2 280 60.4
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 2.4e-39 166.8 275 64.7
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 3.1e-39 166.4 245 73.9
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 5.3e-39 165.6 286 65.7
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 6.9e-39 165.2 280 66.4
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 6.9e-39 165.2 278 65.5
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 9.0e-39 164.9 286 65.4
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 9.0e-39 164.9 290 62.8
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 1.5e-38 164.1 278 58.6
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 3.4e-38 162.9 286 65.4
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 4.5e-38 162.5 275 64.4
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 5.9e-38 162.2 276 64.1
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 7.6e-38 161.8 278 66.2
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 1.7e-37 160.6 276 65.2
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 3.8e-37 159.5 275 63.3
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 3.8e-37 159.5 282 64.2
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 5.0e-37 159.1 279 51.6
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 8.4e-37 158.3 265 66.8
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 1.1e-36 157.9 263 51.3
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 1.4e-36 157.5 297 58.9
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 1.9e-36 157.1 276 63.4
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 1.9e-36 157.1 286 64.3
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.7e-35 153.3 254 59.8
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 7.9e-35 151.8 278 64.7
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 1.0e-34 151.4 279 64.2
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.0e-34 151.4 280 65.4
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.3e-34 151.0 284 57.0
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 2.3e-34 150.2 283 56.9
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 3.0e-34 149.8 284 57.4
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 8.2e-32 141.7 279 63.8
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 8.2e-32 141.7 316 54.7
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 1.1e-31 141.4 276 59.8
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.4e-31 141.0 276 57.2
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.4e-31 141.0 240 62.5
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.4e-31 141.0 279 62.7
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.8e-31 140.6 273 62.6
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.4e-31 140.2 155 58.7
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.1e-31 139.8 282 55.7
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 4.1e-31 139.4 285 62.8
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 5.3e-31 139.0 275 62.5
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 2.0e-30 137.1 281 57.3
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.0e-30 137.1 308 47.4
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 2.6e-30 136.7 270 63.7
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.7e-30 135.2 149 69.1
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 1.0e-29 134.8 128 68.0
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.0e-29 134.8 278 53.6
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.7e-29 134.0 250 66.0
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 3.8e-29 132.9 302 58.9
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 1.1e-28 131.3 291 59.5
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 3.2e-28 129.8 282 56.4
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.2e-28 128.6 149 67.1
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 7.2e-28 128.6 276 36.6
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.7e-27 126.7 277 56.0
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 6.1e-27 125.6 122 66.4
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 6.1e-27 125.6 122 66.4
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 6.1e-27 125.6 151 67.5
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 6.1e-27 125.6 103 62.1
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 2.3e-26 123.6 289 56.7
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 6.7e-26 122.1 271 62.0
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 8.8e-26 121.7 277 54.9
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 7.4e-25 118.6 100 60.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 9.7e-25 118.2 273 60.8
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.7e-24 117.5 306 45.8
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 2.2e-24 117.1 273 60.4
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 2.2e-24 117.1 237 65.4
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 2.2e-24 117.1 291 51.9
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 6.3e-24 115.5 100 62.0
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 6.3e-24 115.5 100 62.0
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.0e-22 110.5 284 60.2
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 3.4e-22 109.8 284 59.9
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 1.3e-21 107.8 290 58.3
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 2.5e-20 103.6 285 58.2
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 7.2e-20 102.1 274 54.4
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 1.8e-15 87.4 100 48.0
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 3.8e-13 79.7 277 32.5
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 9.4e-12 75.1 99 46.5
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 8.0e-11 72.0 139 70.5
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 6.7e-10 68.9 112 50.0
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 7.5e-09 65.5 198 34.3
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 2.2e-08 63.9 38 65.8
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 8.2e-08 62.0 100 36.0
CSS0015725 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 7.0e-07 58.9 62 53.2
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 7.0e-07 58.9 119 34.5
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 9.1e-07 58.5 28 78.6


User provided reference genes

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