Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 1.7e-260 902.1 456 100.0
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 6.8e-233 810.4 456 89.3
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 4.4e-232 807.7 456 88.4
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 4.9e-231 804.3 457 89.1
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 2.4e-230 802.0 457 88.6
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 2.4e-230 802.0 457 88.6
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 4.1e-230 801.2 455 85.7
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 5.4e-230 800.8 456 88.2
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 3.5e-229 798.1 456 87.5
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 1.3e-228 796.2 456 86.2
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 1.5e-227 792.7 456 86.4
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.5e-227 792.0 458 86.0
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 8.0e-226 786.9 456 85.3
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 8.0e-226 786.9 456 85.3
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 1.4e-225 786.2 456 86.0
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 3.1e-225 785.0 456 86.0
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 6.8e-225 783.9 457 86.0
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 8.9e-225 783.5 456 85.3
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 1.2e-224 783.1 456 85.5
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 5.8e-224 780.8 464 84.7
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 5.8e-224 780.8 462 85.5
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 1.7e-223 779.2 460 85.4
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.7e-223 779.2 456 85.3
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 1.1e-222 776.5 456 84.6
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.1e-222 776.5 456 84.2
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.4e-222 775.4 456 84.9
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 3.2e-222 775.0 452 85.6
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 3.2e-222 775.0 457 84.7
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 9.2e-222 773.5 458 84.5
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 9.2e-222 773.5 451 84.7
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 1.6e-221 772.7 460 82.6
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.6e-221 772.7 454 85.5
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 3.5e-221 771.5 427 89.5
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 3.5e-221 771.5 456 84.0
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 7.8e-221 770.4 458 84.1
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 6.6e-220 767.3 427 88.5
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.1e-219 766.5 456 84.0
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 1.5e-219 766.1 456 84.4
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 2.1e-218 762.3 456 83.8
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.8e-218 761.9 458 83.0
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.8e-218 761.9 456 84.2
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 2.8e-218 761.9 452 84.3
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 1.8e-217 759.2 455 83.1
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 3.1e-217 758.4 457 82.9
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 5.2e-217 757.7 462 82.5
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 6.8e-217 757.3 456 83.1
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 8.9e-217 756.9 463 81.2
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 8.9e-217 756.9 506 76.7
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.2e-216 756.5 455 82.9
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.5e-216 756.1 456 83.1
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 2.0e-216 755.7 456 81.1
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 2.0e-216 755.7 464 81.0
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 2.6e-216 755.4 457 82.7
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 9.8e-216 753.4 457 82.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 9.8e-216 753.4 437 85.8
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 1.7e-215 752.7 459 81.7
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 1.7e-215 752.7 459 81.7
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.7e-215 752.7 462 81.2
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 2.2e-215 752.3 457 82.3
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 6.4e-215 750.7 457 82.1
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 8.3e-215 750.4 456 82.5
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 8.3e-215 750.4 456 82.5
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.1e-214 750.0 462 81.0
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.1e-214 750.0 462 80.7
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 1.9e-214 749.2 456 82.2
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 1.9e-214 749.2 456 82.2
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 7.1e-214 747.3 462 80.7
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 9.2e-214 746.9 465 82.2
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 2.1e-213 745.7 425 86.4
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 2.1e-213 745.7 462 80.5
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 1.3e-212 743.0 466 80.5
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 1.3e-212 743.0 463 80.1
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 5.1e-212 741.1 443 82.6
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 2.5e-211 738.8 455 80.7
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 2.5e-211 738.8 459 80.2
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 3.3e-211 738.4 459 81.0
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 4.3e-211 738.0 429 86.5
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 4.3e-211 738.0 429 86.5
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 4.3e-211 738.0 413 87.4
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 4.3e-211 738.0 459 80.2
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 7.3e-211 737.3 462 79.7
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 9.5e-211 736.9 425 84.7
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 4.0e-209 731.5 464 79.7
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 1.2e-208 729.9 436 83.3
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 1.2e-208 729.9 441 82.5
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 3.4e-208 728.4 481 77.1
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 4.4e-208 728.0 461 80.7
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 6.4e-207 724.2 483 76.6
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 5.4e-206 721.1 435 83.0
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 1.2e-205 719.9 419 83.8
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 1.6e-205 719.5 456 78.9
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 2.7e-205 718.8 463 79.5
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 3.5e-205 718.4 410 86.1
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 6.0e-205 717.6 479 76.4
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 6.2e-202 707.6 419 82.1
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 1.2e-200 703.4 456 77.2
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.4e-198 696.4 438 79.7
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 1.9e-198 696.0 391 87.2
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 2.5e-195 685.6 481 73.2
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 5.6e-195 684.5 455 76.9
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 1.3e-194 683.3 531 67.8
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 5.8e-192 674.5 459 74.5
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 1.3e-191 673.3 397 84.9
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.4e-190 669.8 384 85.4
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 9.3e-190 667.2 460 75.2
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 1.0e-188 663.7 384 84.4
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 6.7e-188 661.0 426 77.0
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 5.3e-185 651.4 457 74.6
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 5.8e-184 647.9 460 73.0
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 9.9e-184 647.1 435 75.6
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 3.0e-180 635.6 441 73.0
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 9.6e-179 630.6 414 76.3
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 2.1e-178 629.4 420 75.7
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 6.9e-177 624.4 413 76.3
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 4.5e-176 621.7 411 74.9
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 7.1e-174 614.4 409 73.3
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 5.1e-172 608.2 415 72.5
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 1.1e-163 580.5 489 65.0
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 1.5e-163 580.1 441 70.1
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.2e-152 543.9 587 53.8
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 8.5e-151 537.7 330 83.0
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 4.8e-146 521.9 427 59.7
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 2.0e-139 500.0 330 77.6
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 3.4e-131 472.6 411 57.9
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 9.8e-123 444.5 401 59.1
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 3.8e-119 432.6 369 59.9
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.1e-113 414.5 252 82.1
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.4e-113 413.3 275 75.6
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 2.2e-106 390.2 455 47.7
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 1.2e-104 384.4 441 49.2
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 3.4e-83 313.2 173 91.3
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 6.0e-80 302.4 310 54.8
Potri.007G074101 Populus trichocarpa HOM05D004870 ORTHO05D006061 1.3e-79 301.2 189 82.0
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 2.1e-77 293.9 387 43.2
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 1.3e-58 231.5 358 40.2
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 1.3e-58 231.5 136 80.1
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.3e-45 188.3 388 35.8
SEGI_39125 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 5.9e-43 179.5 117 75.2
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 4.7e-32 143.3 143 56.6
RcHm_v2.0_Chr5g0064321 Rosa chinensis HOM05D004870 ORTHO05D006061 1.1e-28 132.1 81 86.4
vmacro15994 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 1.8e-28 131.3 72 83.3
Thecc.02G156100 Theobroma cacao HOM05D004870 ORTHO05D006061 2.0e-27 127.9 69 85.5
RcHm_v2.0_Chr5g0050031 Rosa chinensis HOM05D004870 ORTHO05D006061 9.7e-22 109.0 67 86.6
C04p22220 Brassica napus HOM05D004870 ORTHO05D006061 1.4e-20 105.1 100 58.0
BcaC02g11010 Brassica carinata HOM05D004870 ORTHO05D006061 2.4e-20 104.4 76 68.4
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 2.7e-16 90.9 296 27.7
PGR142G1834 Punica granatum HOM05D004870 ORTHO05D006061 1.4e-15 88.6 59 78.0
arahy.Tifrunner.gnm1.ann1.7S4D4S Arachis hypogaea HOM05D004870 ORTHO05D000194 2.6e-14 84.3 61 70.5
RcHm_v2.0_Chr5g0050041 Rosa chinensis HOM05D004870 ORTHO05D347201 2.9e-10 70.9 50 64.0
C02p39510 Brassica napus HOM05D000461 ORTHO05D016800 8.0e-08 62.8 70 47.1
BolC2t09964H Brassica oleracea HOM05D000461 ORTHO05D016800 8.0e-08 62.8 70 47.1
CDE05G3312 Ceratophyllum demersum HOM05D004870 ORTHO05D130477 1.8e-07 61.6 74 47.3
AUR62002710 Chenopodium quinoa HOM05D004870 ORTHO05D138226 3.0e-07 60.8 53 64.2


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