Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 6.5e-221 770.4 381 100.0
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 1.9e-183 646.0 356 87.1
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 1.6e-182 642.9 356 86.2
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 6.0e-182 641.0 374 85.8
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.0e-181 640.2 356 86.2
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 5.0e-181 637.9 352 86.9
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 6.6e-181 637.5 356 86.5
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 8.6e-181 637.1 356 86.0
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.1e-180 636.7 350 87.1
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 1.5e-180 636.3 356 86.8
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 1.5e-180 636.3 358 86.0
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 5.6e-180 634.4 356 86.0
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 7.3e-180 634.0 356 85.7
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 7.3e-180 634.0 356 86.8
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 2.1e-179 632.5 356 86.0
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 4.7e-179 631.3 356 85.7
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 4.7e-179 631.3 356 85.7
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 6.2e-179 630.9 356 84.6
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 1.4e-178 629.8 356 85.7
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.8e-178 629.4 356 86.5
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.1e-178 628.6 356 85.4
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.0e-178 628.2 357 85.2
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.0e-178 628.2 357 85.2
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 6.8e-178 627.5 356 85.4
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 8.9e-178 627.1 353 85.6
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 1.5e-177 626.3 356 84.8
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 1.5e-177 626.3 356 85.4
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 2.6e-177 625.5 356 83.4
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 4.4e-177 624.8 356 84.8
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 4.4e-177 624.8 357 84.3
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 9.8e-177 623.6 357 85.2
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 1.3e-176 623.2 357 85.2
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 2.9e-176 622.1 356 84.6
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 3.7e-176 621.7 356 85.7
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 4.9e-176 621.3 356 84.0
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 6.4e-176 620.9 356 85.1
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 1.4e-175 619.8 356 84.3
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.9e-175 619.4 357 84.3
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.2e-175 618.6 350 85.7
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 5.4e-175 617.8 357 84.0
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 1.2e-174 616.7 357 83.8
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.7e-174 615.5 395 77.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 3.5e-174 615.1 357 83.5
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 4.6e-174 614.8 356 82.6
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 6.0e-174 614.4 356 83.1
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 7.8e-174 614.0 356 82.6
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 7.8e-174 614.0 356 82.6
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 1.7e-173 612.8 357 82.9
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 1.7e-173 612.8 356 83.1
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 2.3e-173 612.5 357 84.6
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 3.9e-173 611.7 352 84.1
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 5.1e-173 611.3 357 84.3
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 5.1e-173 611.3 356 82.9
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 6.6e-173 610.9 358 84.1
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 8.6e-173 610.5 357 84.3
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 1.1e-172 610.1 348 85.3
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 1.9e-172 609.4 357 83.2
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 3.3e-172 608.6 357 82.6
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 4.3e-172 608.2 355 83.9
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 5.6e-172 607.8 359 81.9
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 9.5e-172 607.1 357 82.9
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 1.2e-171 606.7 357 83.2
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 1.2e-171 606.7 357 82.6
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.8e-171 605.5 352 83.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 2.8e-171 605.5 359 81.6
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 3.6e-171 605.1 350 82.6
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 4.7e-171 604.7 358 82.4
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 6.2e-171 604.4 350 83.1
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 6.2e-171 604.4 356 83.1
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 6.2e-171 604.4 356 81.7
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.1e-170 603.6 359 81.3
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 1.4e-170 603.2 350 84.0
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.3e-170 602.4 356 81.7
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.3e-170 602.4 357 82.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 3.1e-170 602.1 356 81.2
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 3.1e-170 602.1 356 81.5
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 5.2e-170 601.3 356 82.3
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 8.9e-170 600.5 356 81.2
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 1.2e-169 600.1 350 82.0
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 1.5e-169 599.7 356 82.0
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.0e-169 599.4 356 82.0
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 2.0e-169 599.4 357 80.1
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 4.4e-169 598.2 353 81.9
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 4.4e-169 598.2 359 81.9
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 5.8e-169 597.8 357 81.0
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 7.5e-169 597.4 350 82.9
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 1.3e-168 596.7 356 79.5
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 1.7e-168 596.3 356 80.9
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 2.2e-168 595.9 357 81.0
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 2.2e-168 595.9 356 79.8
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 2.9e-168 595.5 348 83.0
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 4.9e-168 594.7 352 80.7
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.4e-168 594.3 370 80.0
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 8.3e-168 594.0 359 81.6
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.2e-167 592.0 359 81.6
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 4.1e-167 591.7 348 82.5
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 4.1e-167 591.7 348 82.5
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 4.1e-167 591.7 348 82.5
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 4.1e-167 591.7 348 82.5
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 4.1e-167 591.7 348 82.5
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 6.0e-166 587.8 373 78.6
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 7.8e-166 587.4 356 80.3
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 1.3e-165 586.6 360 79.2
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 6.6e-165 584.3 373 78.3
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 6.6e-165 584.3 357 79.0
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 2.5e-164 582.4 356 76.7
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 9.5e-164 580.5 358 81.0
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.6e-163 578.6 357 80.4
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 1.8e-162 576.2 351 80.9
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 5.2e-162 574.7 356 77.2
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 8.9e-162 573.9 356 78.4
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 8.4e-160 567.4 356 77.2
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 4.2e-159 565.1 356 77.2
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 7.1e-159 564.3 357 77.6
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 7.1e-159 564.3 346 80.6
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 4.6e-158 561.6 357 77.9
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 6.6e-157 557.8 356 74.7
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 8.7e-157 557.4 356 74.7
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.3e-156 555.4 356 76.1
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 9.6e-156 553.9 356 78.4
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.4e-154 550.1 347 76.4
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 1.4e-154 550.1 354 77.1
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 2.4e-154 549.3 348 77.6
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 4.0e-154 548.5 419 67.5
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 5.3e-154 548.1 356 76.1
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 9.9e-153 543.9 373 73.5
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.7e-152 543.1 357 75.1
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 2.9e-152 542.3 353 73.7
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 2.9e-152 542.3 349 77.7
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 2.4e-151 539.3 357 74.8
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 5.4e-151 538.1 357 74.8
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 8.7e-149 530.8 350 73.4
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 1.5e-148 530.0 350 73.1
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.3e-147 526.9 357 73.4
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 3.4e-145 518.8 350 70.9
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.3e-144 516.9 350 71.7
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 9.3e-143 510.8 356 67.4
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 1.3e-141 506.9 356 68.8
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 2.3e-141 506.1 356 67.7
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 1.8e-138 496.5 357 66.9
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.8e-138 496.5 355 67.3
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 2.4e-138 496.1 383 68.7
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 4.5e-137 491.9 355 65.9
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 7.9e-134 481.1 280 83.6
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 2.3e-133 479.6 279 82.4
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 6.7e-133 478.0 281 83.3
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 5.6e-132 474.9 348 66.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 3.7e-131 472.2 357 64.1
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 6.2e-131 471.5 358 66.5
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 1.4e-130 470.3 280 81.4
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 6.5e-128 461.5 278 82.0
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 6.5e-128 461.5 334 72.2
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 1.1e-127 460.7 356 62.6
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 1.6e-126 456.8 274 81.0
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 2.7e-126 456.1 269 80.7
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 2.8e-123 446.0 263 84.0
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 8.2e-123 444.5 344 64.2
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 3.2e-119 432.6 313 69.3
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 7.9e-118 427.9 240 86.7
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.7e-115 420.2 285 70.2
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.1e-114 417.5 373 56.0
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 3.1e-114 416.0 355 56.1
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 3.2e-111 406.0 273 70.7
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 5.1e-109 398.7 261 76.6
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.7e-107 393.7 388 52.3
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 3.0e-101 372.9 357 52.7
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 8.0e-94 348.2 198 83.8
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 6.5e-88 328.6 197 79.7
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 6.8e-85 318.5 258 64.7
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 2.7e-81 306.6 208 73.6
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 1.2e-76 291.2 165 85.5
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 7.8e-73 278.5 171 80.7
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 1.1e-50 204.9 212 58.0
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 4.7e-46 189.5 356 32.3
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 1.8e-45 187.6 113 84.1
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 9.3e-42 175.3 119 70.6
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 3.5e-41 173.3 147 62.6
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 2.3e-40 170.6 119 68.9
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 5.1e-40 169.5 421 27.8
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 1.3e-35 154.8 394 26.4
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 2.9e-35 153.7 115 64.3
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 4.3e-31 139.8 84 76.2
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 1.8e-29 134.4 295 29.8
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 1.2e-09 68.6 49 75.5
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 1.0e-08 65.5 68 51.5


User provided reference genes

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