Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H03270 Eucalyptus grandis HOM05D005421 ORTHO05D007601 2.5e-168 595.9 437 100.0
Actinidia35540 Actinidia chinensis HOM05D005421 ORTHO05D007601 6.7e-113 411.8 388 82.5
CSS0007056 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 7.4e-112 408.3 391 82.1
CSS0046729 Camellia sinensis var. sinensis HOM05D005421 ORTHO05D007601 7.4e-112 408.3 391 81.8
TAR636G1951 Trochodendron aralioides HOM05D005421 ORTHO05D007601 2.2e-111 406.8 391 81.6
Glyma.20G238500 Glycine max HOM05D005421 ORTHO05D007601 2.8e-111 406.4 391 80.8
QL03p018920 Quercus lobata HOM05D005421 ORTHO05D007601 4.8e-111 405.6 399 81.2
FvH4_6g07010 Fragaria vesca HOM05D005421 ORTHO05D007601 6.3e-111 405.2 391 81.8
Glyma.10G149900 Glycine max HOM05D005421 ORTHO05D007601 6.3e-111 405.2 391 79.3
Lj5g0011296 Lotus japonicus HOM05D005421 ORTHO05D007601 6.3e-111 405.2 390 82.3
Lalb_Chr02g0148011 Lupinus albus HOM05D005421 ORTHO05D007601 2.4e-110 403.3 391 81.6
Ca_10154_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.0e-109 400.2 396 81.1
Ca_29832_v3 Cicer arietinum L. HOM05D005421 ORTHO05D007601 2.0e-109 400.2 396 81.1
FAN14G1909 Fragaria x ananassa HOM05D005421 ORTHO05D007601 2.6e-109 399.8 391 80.6
Psat6g151720 Pisum sativum HOM05D005421 ORTHO05D007601 3.5e-109 399.4 397 81.1
MBI18_g04564_MAGBIO Magnolia biondii HOM05D005421 ORTHO05D007601 5.9e-109 398.7 390 80.0
Prupe.1G236900 Prunus persica HOM05D005421 ORTHO05D007601 7.7e-109 398.3 392 77.8
Duzib150G0691 Durio zibethinus HOM05D005421 ORTHO05D007601 1.0e-108 397.9 391 83.6
RcHm_v2.0_Chr3g0456541 Rosa chinensis HOM05D005421 ORTHO05D007601 1.0e-108 397.9 391 81.6
Phvul.007G199400 Phaseolus vulgaris HOM05D005421 ORTHO05D007601 2.2e-108 396.7 394 77.9
PGR031G1007 Punica granatum HOM05D005421 ORTHO05D007601 2.2e-108 396.7 404 83.9
CiPaw.07G025400 Carya illinoinensis HOM05D005421 ORTHO05D007601 5.0e-108 395.6 403 78.4
PSO170G1114 Papaver somniferum HOM05D005421 ORTHO05D007601 5.0e-108 395.6 389 80.7
FAN02G3486 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.2e-106 391.0 406 77.3
Gohir.D10G110800 Gossypium hirsutum HOM05D005421 ORTHO05D007601 4.7e-106 389.0 393 75.6
Gorai.011G122100 Gossypium raimondii HOM05D005421 ORTHO05D007601 4.7e-106 389.0 393 75.6
Thecc.06G040900 Theobroma cacao HOM05D005421 ORTHO05D007601 6.1e-106 388.7 398 78.1
Lalb_Chr21g0310441 Lupinus albus HOM05D005421 ORTHO05D007601 1.8e-105 387.1 392 81.4
Gohir.A10G155100 Gossypium hirsutum HOM05D005421 ORTHO05D007601 6.8e-105 385.2 396 74.2
Solyc01g100060.4 Solanum lycopersicum HOM05D005421 ORTHO05D007601 6.8e-105 385.2 392 79.8
FAN05G0688 Fragaria x ananassa HOM05D005421 ORTHO05D007601 1.2e-104 384.4 423 71.2
CANSAT54G2596 Cannabis sativa HOM05D005421 ORTHO05D007601 2.0e-104 383.6 396 82.8
Manes.13G000084 Manihot esculenta HOM05D005421 ORTHO05D007601 2.0e-104 383.6 387 81.1
MELO3C004206.2 Cucumis melo HOM05D005421 ORTHO05D007601 4.4e-104 382.5 397 77.6
Sopen01g043590 Solanum pennellii HOM05D005421 ORTHO05D007601 4.4e-104 382.5 406 78.3
Nitab4.5_0001971g0070 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.7e-103 380.6 394 79.2
Nitab4.5_0002612g0040 Nicotiana tabacum HOM05D005421 ORTHO05D007601 1.1e-102 377.9 394 79.4
GSVIVG01031188001 Vitis vinifera HOM05D005421 ORTHO05D007601 1.1e-102 377.9 221 84.2
Rhsim11G0092200 Rhododendron simsii HOM05D005421 ORTHO05D007601 1.4e-102 377.5 437 75.3
CsaV3_2G006840 Cucumis sativus L. HOM05D005421 ORTHO05D007601 1.8e-102 377.1 407 75.4
SGA_v2.0_scaffold4G01947 Striga asiatica HOM05D005421 ORTHO05D007601 1.8e-102 377.1 387 70.0
Atru.chr2.115 Acer truncatum HOM05D005421 ORTHO05D007601 4.1e-102 375.9 394 82.5
VMungo0720G1843 Vigna mungo HOM05D005421 ORTHO05D007601 4.1e-102 375.9 394 80.5
MD12G1209800 Malus domestica HOM05D005421 ORTHO05D007601 7.0e-102 375.2 388 79.6
ClCG02G015170 Citrullus lanatus HOM05D005421 ORTHO05D007601 9.1e-102 374.8 403 76.4
MD04G1196900 Malus domestica HOM05D005421 ORTHO05D007601 9.1e-102 374.8 388 77.1
Medtr1g083720 Medicago truncatula HOM05D005421 ORTHO05D007601 1.2e-101 374.4 397 79.8
Aqoxy2G02863 Aquilegia oxysepala HOM05D005421 ORTHO05D007601 1.6e-101 374.0 221 84.6
Ciclev10001489m.g Citrus clementina HOM05D005421 ORTHO05D007601 1.6e-101 374.0 389 83.0
PSO407G0035 Papaver somniferum HOM05D005421 ORTHO05D007601 4.5e-101 372.5 221 81.4
CAN.G1273.26 Capsicum annuum HOM05D005421 ORTHO05D007601 5.9e-101 372.1 397 78.8
Cpa.g.sc48.125 Carica papaya HOM05D005421 ORTHO05D007601 1.0e-100 371.3 411 78.1
Potri.013G012000 Populus trichocarpa HOM05D005421 ORTHO05D007601 1.7e-100 370.5 389 77.1
Sabra13G0010600 Salix brachista HOM05D005421 ORTHO05D007601 2.2e-100 370.2 389 77.6
Sed0018701 Sechium edule HOM05D005421 ORTHO05D007601 2.9e-100 369.8 405 72.3
Dinv30846 Davidia involucrata HOM05D005421 ORTHO05D007601 8.5e-100 368.2 221 83.3
Cfa006671 Carpinus fangiana HOM05D005421 ORTHO05D007601 2.5e-99 366.7 221 80.1
CDE02G0330 Ceratophyllum demersum HOM05D005421 ORTHO05D007601 2.5e-99 366.7 221 81.9
Cc02_g34540 Coffea canephora HOM05D005421 ORTHO05D007601 3.2e-99 366.3 221 84.2
Peaxi162Scf00037g01816 Petunia axillaris HOM05D005421 ORTHO05D007601 7.2e-99 365.2 390 77.2
SalBow1G5723 Salvia bowleyana HOM05D005421 ORTHO05D007601 1.2e-98 364.4 389 77.4
DCAR_004503 Daucus carota HOM05D005421 ORTHO05D007601 2.7e-98 363.2 397 78.8
TWI12G1149 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 2.3e-97 360.1 221 76.9
Lsat_1_v5_gn_7_73220 Lactuca sativa HOM05D005421 ORTHO05D007601 8.8e-97 358.2 221 80.5
HanXRQChr01g0011821 Helianthus annuus HOM05D005421 ORTHO05D007601 1.2e-96 357.8 391 79.5
THA.LOC104805907 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 1.5e-96 357.5 393 74.8
Haze_04100 Corylus avellana HOM05D005421 ORTHO05D007601 2.0e-96 357.1 494 58.1
THA.LOC104820733 Tarenaya hassleriana HOM05D005421 ORTHO05D007601 2.0e-96 357.1 189 87.3
BcaB01g03524 Brassica carinata HOM05D005421 ORTHO05D007601 2.6e-96 356.7 189 86.8
BcaC01g05387 Brassica carinata HOM05D005421 ORTHO05D007601 2.6e-96 356.7 221 81.0
C03p27110 Brassica napus HOM05D005421 ORTHO05D007601 2.6e-96 356.7 221 81.0
BolC3t15092H Brassica oleracea HOM05D005421 ORTHO05D007601 2.6e-96 356.7 221 81.0
Migut.B01005 Erythranthe guttata HOM05D005421 ORTHO05D007601 2.6e-96 356.7 223 79.8
Sp4g22980 Schrenkiella parvula HOM05D005421 ORTHO05D007601 3.4e-96 356.3 189 86.8
CARHR135760 Cardamine hirsuta HOM05D005421 ORTHO05D007601 4.4e-96 355.9 189 86.8
PGSC0003DMG400024728 Solanum tuberosum HOM05D005421 ORTHO05D007601 9.8e-96 354.8 392 75.5
AT2G40650 Arabidopsis thaliana HOM05D005421 ORTHO05D007601 1.7e-95 354.0 189 86.2
BraA03t11510Z Brassica rapa HOM05D005421 ORTHO05D007601 1.7e-95 354.0 189 86.2
AL4G38520 Arabidopsis lyrata HOM05D005421 ORTHO05D007601 2.2e-95 353.6 189 86.2
AUR62005243 Chenopodium quinoa HOM05D005421 ORTHO05D007601 2.2e-95 353.6 189 87.3
Sc16g0008670 Simmondsia chinensis HOM05D005421 ORTHO05D007601 2.2e-95 353.6 189 88.4
EL10Ac4g09870 Beta vulgaris HOM05D005421 ORTHO05D007601 2.8e-95 353.2 392 78.6
Carub.0004s2294 Capsella rubella HOM05D005421 ORTHO05D007601 2.8e-95 353.2 189 86.2
Dinv24409 Davidia involucrata HOM05D005421 ORTHO05D007601 2.8e-95 353.2 358 85.5
TWI56G0052 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 3.7e-95 352.8 239 73.2
HPP92_020212 Vanilla planifolia HOM05D005421 ORTHO05D007601 3.7e-95 352.8 216 83.8
HPP92_020232 Vanilla planifolia HOM05D005421 ORTHO05D007601 3.7e-95 352.8 216 83.8
Ah.04g161240 Amaranthus hybridus HOM05D005421 ORTHO05D007601 1.4e-94 350.9 189 87.3
Oeu045895.1 Olea europaea HOM05D005421 ORTHO05D007601 1.8e-94 350.5 412 62.4
COL.COLO4_26689 Corchorus olitorius HOM05D005421 ORTHO05D007601 2.4e-94 350.1 398 55.3
Hund07118 Selenicereus undatus HOM05D005421 ORTHO05D007601 2.4e-94 350.1 391 80.6
Aa31LG3G1470 Aethionema arabicum HOM05D005421 ORTHO05D007601 3.1e-94 349.7 389 73.8
ECA236G4663 Erigeron canadensis HOM05D005421 ORTHO05D007601 3.1e-94 349.7 221 79.2
vmacro01533 Vaccinium macrocarpon HOM05D005421 ORTHO05D007601 5.4e-94 349.0 441 72.1
BcaC02g07328 Brassica carinata HOM05D005421 ORTHO05D007601 2.7e-93 346.7 189 86.2
Zm00001eb095730 Zea mays HOM05D005421 ORTHO05D007601 4.5e-93 345.9 189 85.7
A04p31080 Brassica napus HOM05D005421 ORTHO05D007601 1.3e-92 344.4 189 85.7
Os09g0103600 Oryza sativa ssp. japonica HOM05D005421 ORTHO05D007601 1.1e-91 341.3 189 84.1
A03p22860 Brassica napus HOM05D005421 ORTHO05D007601 1.5e-91 340.9 212 76.9
C04p68470 Brassica napus HOM05D005421 ORTHO05D007601 3.3e-91 339.7 196 83.2
arahy.Tifrunner.gnm1.ann1.1MC3I0 Arachis hypogaea HOM05D005421 ORTHO05D007601 2.1e-90 337.0 491 62.5
BcaB06g29166 Brassica carinata HOM05D005421 ORTHO05D007601 3.6e-90 336.3 189 84.1
Mapoly0138s0022 Marchantia polymorpha HOM05D005421 ORTHO05D007601 2.3e-89 333.6 189 81.0
BolC4t28347H Brassica oleracea HOM05D005421 ORTHO05D007601 4.0e-89 332.8 218 75.2
BraA04t18563Z Brassica rapa HOM05D005421 ORTHO05D007601 6.8e-89 332.0 210 77.1
Pp3c1_35390 Physcomitrium patens HOM05D005421 ORTHO05D007601 4.4e-88 329.3 221 74.7
AagrBONN_evm.TU.Sc2ySwM_117.208 Anthoceros agrestis HOM05D005421 ORTHO05D007601 1.7e-87 327.4 189 79.4
CBR_g27792 Chara braunii HOM05D005421 ORTHO05D007601 6.3e-87 325.5 189 79.9
COL.COLO4_07356 Corchorus olitorius HOM05D005421 ORTHO05D007601 1.4e-86 324.3 393 54.2
Nitab4.5_0003248g0020 Nicotiana tabacum HOM05D005421 ORTHO05D007601 3.2e-86 323.2 189 80.4
arahy.Tifrunner.gnm1.ann1.MB2RBZ Arachis hypogaea HOM05D005421 ORTHO05D007601 1.3e-84 317.8 533 57.2
AUR62000721 Chenopodium quinoa HOM05D005421 ORTHO05D007601 1.3e-84 317.8 167 88.6
TWI38G1969 Tripterygium wilfordii HOM05D005421 ORTHO05D007601 1.1e-83 314.7 391 50.6
SMO361G0640 Selaginella moellendorffii HOM05D005421 ORTHO05D007601 1.0e-81 308.1 189 75.7
FAN09G4258 Fragaria x ananassa HOM05D000389 ORTHO05D000287 1.4e-81 307.8 387 66.1
Nn4g25707 Nelumbo nucifera HOM05D005421 ORTHO05D007601 5.2e-81 305.8 221 74.2
Cre12.g503400 Chlamydomonas reinhardtii HOM05D005421 ORTHO05D007601 4.9e-71 272.7 189 64.0
Peaxi162Scf00404g00814 Petunia axillaris HOM05D005421 ORTHO05D007601 1.2e-69 268.1 385 46.0
MCO01G394 Micromonas commoda HOM05D005421 ORTHO05D007601 2.4e-57 227.3 177 58.8
Haze_27467 Corylus avellana HOM05D005421 ORTHO05D007601 2.9e-55 220.3 184 57.6
Potri.005G021600 Populus trichocarpa HOM05D005421 ORTHO05D007601 4.6e-53 213.0 334 65.3
PRCOL_00004539 Prasinoderma coloniale HOM05D005421 ORTHO05D007601 5.1e-52 209.5 192 54.2
Lj9C202T10 Lonicera japonica HOM05D005421 ORTHO05D007601 3.2e-46 190.3 97 88.7
Prupe.6G317400 Prunus persica HOM05D005421 ORTHO05D007601 8.7e-44 182.2 297 65.7
SEGI_13779 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 1.4e-41 174.9 94 84.0
Lj9A202T65 Lonicera japonica HOM05D005421 ORTHO05D007601 1.8e-41 174.5 125 71.2
SEGI_07889 Sequoiadendron giganteum HOM05D005421 ORTHO05D007601 2.9e-23 114.0 90 61.1
TAR362G1077 Trochodendron aralioides HOM05D005421 ORTHO05D026565 1.4e-22 111.7 83 73.5
ATR0469G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 9.3e-22 109.0 70 70.0
ATR1164G001 Amborella trichopoda HOM05D005421 ORTHO05D007601 9.3e-22 109.0 70 70.0
Lj3g0025046 Lotus japonicus HOM05D005421 ORTHO05D026565 1.0e-15 89.0 60 70.0
RcHm_v2.0_Chr7g0209371 Rosa chinensis HOM05D005421 ORTHO05D007601 7.2e-14 82.8 53 66.0
BcaB06g27834 Brassica carinata HOM05D005421 ORTHO05D031867 6.7e-12 76.3 69 59.4
Dinv05263 Davidia involucrata HOM05D002902 ORTHO05D008934 1.8e-09 68.2 42 71.4
ATR0693G223 Amborella trichopoda HOM05D005421 ORTHO05D031077 1.4e-06 58.5 28 96.4
RcHm_v2.0_Chr7g0209411 Rosa chinensis HOM05D005421 ORTHO05D347087 4.2e-06 57.0 39 64.1
BcaB06g29163 Brassica carinata HOM05D005421 ORTHO05D031077 7.2e-06 56.2 26 96.2
BcaB06g29165 Brassica carinata HOM05D011401 ORTHO05D018605 7.2e-06 56.2 117 34.2


User provided reference genes

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