Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H01486 Eucalyptus grandis HOM05D007546 ORTHO05D009542 1.4e-148 529.6 270 100.0
Dinv34747 Davidia involucrata HOM05D007546 ORTHO05D009542 8.2e-93 344.4 268 64.6
QL12p022024 Quercus lobata HOM05D007546 ORTHO05D009542 1.0e-90 337.4 268 61.6
CSS0011141 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.7e-90 336.7 266 64.7
Actinidia24887 Actinidia chinensis HOM05D007546 ORTHO05D009542 2.7e-88 329.3 266 60.5
Duzib138G1282 Durio zibethinus HOM05D007546 ORTHO05D009542 4.8e-85 318.5 257 61.5
TWI14G0110 Tripterygium wilfordii HOM05D007546 ORTHO05D009542 1.4e-84 317.0 266 59.4
Atru.chr5.1426 Acer truncatum HOM05D007546 ORTHO05D009542 1.8e-84 316.6 268 57.8
Gohir.D08G076500 Gossypium hirsutum HOM05D007546 ORTHO05D009542 5.3e-84 315.1 264 59.8
PGR119G0241 Punica granatum HOM05D007546 ORTHO05D009542 1.2e-83 313.9 268 57.5
GSVIVG01011126001 Vitis vinifera HOM05D007546 ORTHO05D009542 8.5e-82 307.8 268 59.3
Gohir.A08G068100 Gossypium hirsutum HOM05D007546 ORTHO05D009542 7.2e-81 304.7 264 59.1
Hma1.2p1_0257F.1_g103530 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 7.2e-81 304.7 257 59.1
Lsat_1_v5_gn_9_3860 Lactuca sativa HOM05D007546 ORTHO05D009542 2.1e-80 303.1 252 59.9
MELO3C015843.2 Cucumis melo HOM05D007546 ORTHO05D009542 3.6e-80 302.4 266 55.6
CsaV3_7G028190 Cucumis sativus L. HOM05D007546 ORTHO05D009542 3.6e-80 302.4 266 54.9
DCAR_018417 Daucus carota HOM05D007546 ORTHO05D009542 3.6e-80 302.4 266 56.0
HanXRQChr10g0282741 Helianthus annuus HOM05D007546 ORTHO05D009542 6.1e-80 301.6 265 59.6
Sed0013948 Sechium edule HOM05D007546 ORTHO05D009542 6.1e-80 301.6 261 55.9
Sabra05G0158800 Salix brachista HOM05D007546 ORTHO05D009542 6.7e-79 298.1 264 56.4
ClCG09G006970 Citrullus lanatus HOM05D007546 ORTHO05D009542 1.7e-77 293.5 291 51.5
Haze_04718 Corylus avellana HOM05D007546 ORTHO05D009542 1.7e-77 293.5 249 61.0
vmacro14926 Vaccinium macrocarpon HOM05D007546 ORTHO05D009542 2.2e-77 293.1 256 58.2
Potri.005G208700 Populus trichocarpa HOM05D007546 ORTHO05D009542 3.7e-77 292.4 264 56.1
Gorai.004G081100 Gossypium raimondii HOM05D007546 ORTHO05D009542 1.1e-76 290.8 248 59.3
COL.COLO4_09104 Corchorus olitorius HOM05D007546 ORTHO05D009542 2.4e-76 289.7 249 58.2
Aqoxy2G03310 Aquilegia oxysepala HOM05D007546 ORTHO05D009542 9.1e-76 287.7 265 53.6
Thecc.01G280300 Theobroma cacao HOM05D007546 ORTHO05D009542 1.7e-74 283.5 222 63.1
Nn2g12733 Nelumbo nucifera HOM05D007546 ORTHO05D009542 2.2e-74 283.1 269 51.3
Ciclev10023872m.g Citrus clementina HOM05D007546 ORTHO05D009542 5.0e-74 282.0 253 58.1
Cc01_g19550 Coffea canephora HOM05D007546 ORTHO05D009542 8.5e-74 281.2 271 53.9
MD11G1286600 Malus domestica HOM05D007546 ORTHO05D009542 1.6e-72 276.9 264 54.9
Peaxi162Scf01622g00012 Petunia axillaris HOM05D007546 ORTHO05D009542 1.6e-72 276.9 267 55.4
Lj2C1174G3 Lonicera japonica HOM05D007546 ORTHO05D009542 3.6e-72 275.8 246 54.9
AUR62036823 Chenopodium quinoa HOM05D007546 ORTHO05D009542 7.9e-72 274.6 270 52.2
PSO170G1280 Papaver somniferum HOM05D007546 ORTHO05D009542 1.4e-71 273.9 265 51.3
THA.LOC104801231 Tarenaya hassleriana HOM05D007546 ORTHO05D009542 1.1e-70 270.8 264 53.4
VMungo1383G0744 Vigna mungo HOM05D007546 ORTHO05D009542 1.1e-70 270.8 264 52.7
Hund05346 Selenicereus undatus HOM05D007546 ORTHO05D009542 2.0e-70 270.0 265 52.8
RcHm_v2.0_Chr6g0291141 Rosa chinensis HOM05D007546 ORTHO05D009542 5.7e-70 268.5 265 55.1
MSTRG.18229 Avicennia marina HOM05D007546 ORTHO05D009542 1.3e-69 267.3 265 52.8
CANSAT25G0166 Cannabis sativa HOM05D007546 ORTHO05D009542 3.7e-69 265.8 265 52.5
Lj1g0009003 Lotus japonicus HOM05D007546 ORTHO05D009542 3.7e-69 265.8 266 50.4
Psat3g064520 Pisum sativum HOM05D007546 ORTHO05D009542 4.8e-69 265.4 259 54.4
Medtr7g094790 Medicago truncatula HOM05D007546 ORTHO05D009542 2.4e-68 263.1 259 54.1
SalBow4G0341 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.1e-68 262.3 267 52.4
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 2.0e-67 260.0 259 50.6
FvH4_2g23671 Fragaria vesca HOM05D007546 ORTHO05D009542 4.5e-67 258.8 257 51.0
Hma1.2p1_0257F.1_g103520 Hydrangea macrophylla HOM05D007546 ORTHO05D009542 5.9e-67 258.5 205 62.4
EL10Ac7g17228 Beta vulgaris HOM05D007546 ORTHO05D009542 7.7e-67 258.1 275 50.9
Carub.0001s0232 Capsella rubella HOM05D007546 ORTHO05D009542 7.7e-67 258.1 265 51.3
AL1G12670 Arabidopsis lyrata HOM05D007546 ORTHO05D009542 1.0e-66 257.7 264 51.1
Sp1g02200 Schrenkiella parvula HOM05D007546 ORTHO05D009542 1.3e-66 257.3 263 51.0
arahy.Tifrunner.gnm1.ann1.99CH68 Arachis hypogaea HOM05D007546 ORTHO05D009542 5.0e-66 255.4 264 50.0
Lalb_Chr01g0013761 Lupinus albus HOM05D007546 ORTHO05D009542 5.0e-66 255.4 269 49.8
ECA247G1813 Erigeron canadensis HOM05D007546 ORTHO05D009542 8.5e-66 254.6 266 51.5
arahy.Tifrunner.gnm1.ann1.N7I060 Arachis hypogaea HOM05D007546 ORTHO05D009542 1.9e-65 253.4 264 49.6
Thhalv10008478m.g Eutrema salsugineum HOM05D007546 ORTHO05D009542 3.2e-65 252.7 263 49.8
Prupe.8G241900 Prunus persica HOM05D007546 ORTHO05D009542 3.2e-65 252.7 272 50.7
PGSC0003DMG402012883 Solanum tuberosum HOM05D007546 ORTHO05D009542 3.2e-65 252.7 268 51.1
SGA_v2.0_scaffold1G00465 Striga asiatica HOM05D007546 ORTHO05D009542 3.2e-65 252.7 265 51.7
Manes.01G208300 Manihot esculenta HOM05D007546 ORTHO05D009542 4.2e-65 252.3 222 58.6
arahy.Tifrunner.gnm1.ann1.P6ZKNU Arachis hypogaea HOM05D007546 ORTHO05D009542 9.4e-65 251.1 264 49.2
MBI19_g16657_MAGBIO Magnolia biondii HOM05D007546 ORTHO05D009542 1.2e-64 250.8 265 47.5
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 2.1e-64 250.0 262 49.6
Nitab4.5_0001028g0010 Nicotiana tabacum HOM05D007546 ORTHO05D009542 2.1e-64 250.0 245 53.9
Solyc09g065110.4 Solanum lycopersicum HOM05D007546 ORTHO05D009542 6.1e-64 248.4 268 50.4
Sopen09g026830 Solanum pennellii HOM05D007546 ORTHO05D009542 6.1e-64 248.4 268 49.6
AUR62038619 Chenopodium quinoa HOM05D007546 ORTHO05D009542 3.0e-63 246.1 287 47.0
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.1e-62 244.2 284 45.8
Ca_08577_v3 Cicer arietinum L. HOM05D007546 ORTHO05D009542 1.1e-62 244.2 230 54.8
Cpa.g.sc52.28 Carica papaya HOM05D007546 ORTHO05D009542 2.2e-61 240.0 183 63.4
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.8e-60 236.9 249 50.6
Aa31LG1G9350 Aethionema arabicum HOM05D007546 ORTHO05D009542 2.4e-60 236.5 258 48.8
Migut.D00289 Erythranthe guttata HOM05D007546 ORTHO05D009542 1.7e-58 230.3 266 47.7
Oeu012757.1 Olea europaea HOM05D007546 ORTHO05D009542 1.6e-56 223.8 206 55.8
CARHR002520 Cardamine hirsuta HOM05D007546 ORTHO05D009542 2.1e-56 223.4 229 51.5
Sc05g0004940 Simmondsia chinensis HOM05D007546 ORTHO05D009542 4.0e-55 219.2 215 54.4
HPP92_010632 Vanilla planifolia HOM05D007546 ORTHO05D009542 4.0e-55 219.2 261 42.9
TPR.G6147 Trifolium pratense HOM05D007546 ORTHO05D009542 4.4e-54 215.7 218 54.1
FAN24G2921 Fragaria x ananassa HOM05D005331 ORTHO05D007596 7.5e-54 214.9 226 49.6
FAN20G2110 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.8e-53 213.0 226 49.6
Ah.15g091950 Amaranthus hybridus HOM05D007546 ORTHO05D009542 7.0e-52 208.4 250 44.8
Os05g0251400 Oryza sativa ssp. japonica HOM05D007546 ORTHO05D009542 1.2e-51 207.6 259 44.0
unitig_61.g26331 Utricularia gibba HOM05D007546 ORTHO05D009542 5.9e-51 205.3 274 43.4
FAN15G1459 Fragaria x ananassa HOM05D005331 ORTHO05D007596 2.9e-50 203.0 253 44.7
Nitab4.5_0010448g0030 Nicotiana tabacum HOM05D007546 ORTHO05D009542 1.1e-49 201.1 245 46.5
ATR0626G078 Amborella trichopoda HOM05D007546 ORTHO05D009542 3.2e-49 199.5 258 44.2
Zm00001eb132020 Zea mays HOM05D007546 ORTHO05D009542 3.0e-47 193.0 255 41.2
CAN.G242.7 Capsicum annuum HOM05D007546 ORTHO05D009542 8.8e-47 191.4 206 51.5
AT1G03180 Arabidopsis thaliana HOM05D007546 ORTHO05D009542 7.0e-44 181.8 192 51.0
AUR62043164 Chenopodium quinoa HOM05D007546 ORTHO05D009542 1.7e-42 177.2 170 54.7
Glyma.03G153000 Glycine max HOM05D007546 ORTHO05D009542 1.1e-41 174.5 175 50.9
Phvul.001G150400 Phaseolus vulgaris HOM05D007546 ORTHO05D009542 1.1e-41 174.5 174 51.1
Potri.002G053801 Populus trichocarpa HOM05D007546 ORTHO05D009542 2.5e-33 146.7 135 57.0
Glyma.19G155400 Glycine max HOM05D007546 ORTHO05D009542 8.3e-21 105.1 109 49.5
Mapoly0002s0121 Marchantia polymorpha HOM05D007546 ORTHO05D009542 4.7e-16 89.4 260 31.2
CSS0034697 Camellia sinensis var. sinensis HOM05D007546 ORTHO05D009542 1.8e-15 87.4 85 52.9
SalBow4G3151 Salvia bowleyana HOM05D007546 ORTHO05D009542 4.3e-09 66.2 49 57.1
SalBow8G3203 Salvia bowleyana HOM05D007546 ORTHO05D009542 1.2e-08 64.7 49 55.1
Lsat_1_v5_gn_8_136820 Lactuca sativa HOM05D007546 ORTHO05D009542 1.2e-06 58.2 43 58.1
SalBow1G5735 Salvia bowleyana HOM05D007546 ORTHO05D009542 7.6e-06 55.5 49 51.0


User provided reference genes

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