Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 6.5e-276 953.4 454 100.0
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 1.6e-202 709.5 346 99.4
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 2.2e-191 672.5 462 70.3
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 9.6e-187 657.1 456 69.7
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.6e-184 649.0 451 69.8
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 7.6e-184 647.5 451 69.0
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 1.7e-183 646.4 455 69.0
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 2.2e-183 646.0 451 68.7
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 2.9e-183 645.6 452 69.7
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 2.9e-183 645.6 457 69.6
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 3.8e-183 645.2 456 68.2
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 2.4e-182 642.5 457 68.1
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 2.4e-182 642.5 456 69.3
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 4.2e-182 641.7 463 68.0
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 9.3e-182 640.6 466 68.2
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 7.8e-181 637.5 456 68.0
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 4.3e-179 631.7 454 66.1
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 7.3e-179 630.9 454 68.7
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 2.1e-178 629.4 476 67.4
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.5e-176 623.2 466 66.3
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 3.4e-176 622.1 457 67.8
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 5.8e-176 621.3 451 66.7
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.4e-174 615.9 472 64.6
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 3.2e-174 615.5 454 65.4
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 7.1e-174 614.4 456 66.2
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 9.3e-174 614.0 472 65.3
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 1.2e-173 613.6 464 63.4
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 2.1e-173 612.8 470 65.5
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 1.8e-172 609.8 456 65.1
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 2.3e-172 609.4 471 64.3
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 6.7e-172 607.8 467 66.0
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 1.1e-171 607.1 474 64.6
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 2.1e-170 602.8 458 65.5
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 3.7e-170 602.1 451 64.7
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.5e-168 596.7 457 65.6
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 2.0e-168 596.3 475 63.6
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 2.0e-168 596.3 517 59.2
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 2.6e-168 595.9 480 62.7
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 5.8e-168 594.7 454 66.5
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 9.9e-168 594.0 465 62.6
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 2.9e-167 592.4 453 64.7
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 4.9e-167 591.7 486 61.5
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 8.4e-167 590.9 450 64.0
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.4e-166 590.1 459 63.8
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 1.4e-166 590.1 451 65.6
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.4e-166 590.1 452 65.0
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.2e-166 589.0 456 63.2
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 7.1e-166 587.8 465 62.2
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 2.1e-165 586.3 459 63.0
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 3.0e-164 582.4 481 62.4
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.0e-164 582.4 456 62.5
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 1.9e-163 579.7 464 61.4
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.5e-163 579.3 456 60.5
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.5e-163 579.3 456 60.5
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 2.1e-162 576.2 460 62.2
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 4.8e-162 575.1 451 63.4
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 8.2e-162 574.3 454 61.9
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 1.1e-161 573.9 464 61.6
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 1.1e-161 573.9 467 60.6
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 3.1e-161 572.4 450 61.3
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 6.9e-161 571.2 491 58.9
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 3.4e-160 568.9 455 60.9
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 7.6e-160 567.8 451 60.5
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 2.9e-159 565.8 452 61.3
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 6.5e-159 564.7 447 60.4
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 1.4e-158 563.5 452 60.0
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 3.2e-158 562.4 452 60.6
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 3.2e-158 562.4 452 60.6
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 4.2e-158 562.0 488 59.0
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 5.5e-158 561.6 413 68.0
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 9.3e-158 560.8 453 61.4
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 5.1e-156 555.1 452 60.0
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 5.1e-156 555.1 456 61.6
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 6.7e-156 554.7 453 60.0
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.1e-155 553.9 472 61.4
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.1e-155 553.9 472 61.2
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 1.5e-155 553.5 451 59.6
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 1.8e-153 546.6 465 59.6
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.2e-152 543.9 459 60.3
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 8.5e-151 537.7 466 58.2
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 2.5e-150 536.2 480 56.7
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 7.2e-150 534.6 451 60.1
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 1.2e-149 533.9 418 64.4
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 9.7e-147 524.2 467 57.0
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 4.5e-144 515.4 418 59.8
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 1.0e-143 514.2 440 56.4
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 2.2e-143 513.1 468 57.9
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 1.0e-140 504.2 489 52.8
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 3.7e-138 495.7 480 55.2
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.0e-136 490.0 349 67.3
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 4.2e-134 482.3 386 62.7
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 1.6e-133 480.3 449 53.5
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 2.7e-133 479.6 385 62.6
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.0e-128 463.4 377 64.2
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.6e-123 446.4 450 52.9
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 1.3e-122 444.1 333 66.4
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 1.8e-116 423.7 366 57.7
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 1.8e-108 397.1 513 41.5
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.6e-104 384.0 467 44.1
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 8.6e-103 378.3 491 42.2
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 1.9e-102 377.1 458 43.2
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 7.3e-102 375.2 348 56.9
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 2.9e-98 363.2 296 61.8
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 3.6e-93 346.3 460 38.9
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 2.3e-87 327.0 432 43.3
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 4.3e-78 296.2 453 38.2
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 2.6e-67 260.4 248 54.4
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 8.1e-61 238.8 472 32.0
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 2.4e-44 184.1 278 38.8
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 4.0e-44 183.3 236 46.2
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 9.0e-44 182.2 486 29.0
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.6e-43 180.6 155 60.0
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.0e-42 178.7 155 59.4
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.3e-42 178.3 243 39.1
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 2.7e-24 117.5 810 20.0
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 3.3e-22 110.5 107 52.3
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 1.3e-21 108.6 91 53.8
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.6e-19 100.9 225 32.9
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 3.2e-17 94.0 78 64.1
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 2.1e-16 91.3 116 43.1
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 6.1e-16 89.7 68 61.8
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 5.2e-15 86.7 79 57.0
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 8.0e-08 62.8 64 53.1
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.0e-07 62.4 48 58.3


User provided reference genes

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