Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 2.5e-278 961.4 488 100.0
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 1.9e-172 609.8 487 65.3
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 2.3e-170 602.8 487 64.9
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 1.9e-169 599.7 490 63.5
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 3.4e-166 589.0 488 62.7
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.9e-164 583.2 462 64.9
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 3.0e-162 575.9 490 62.2
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 3.9e-162 575.5 469 64.4
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 8.8e-162 574.3 421 67.7
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 2.0e-161 573.2 492 61.8
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 3.3e-161 572.4 498 60.8
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 2.2e-160 569.7 502 59.6
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 2.4e-159 566.2 493 59.4
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 6.9e-159 564.7 493 59.0
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 2.6e-158 562.8 485 63.3
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 1.3e-157 560.5 475 61.5
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.2e-157 559.7 433 64.7
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 8.5e-157 557.8 423 66.0
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.1e-156 557.4 419 65.4
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.4e-156 557.0 433 64.7
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 1.9e-156 556.6 559 55.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 2.5e-156 556.2 442 63.1
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 4.2e-156 555.4 462 61.7
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 4.2e-156 555.4 454 62.3
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 7.2e-156 554.7 491 59.5
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 9.4e-156 554.3 433 64.2
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.7e-155 552.7 424 64.2
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 4.7e-155 552.0 462 61.9
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.0e-154 550.8 462 61.3
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.4e-154 550.4 433 63.5
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 1.4e-154 550.4 442 62.7
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 3.9e-154 548.9 416 65.4
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 2.0e-153 546.6 416 64.9
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 2.0e-153 546.6 428 63.1
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 3.3e-153 545.8 412 64.8
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 4.4e-153 545.4 422 64.5
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 1.3e-152 543.9 488 59.4
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.7e-152 543.5 462 60.6
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 2.2e-152 543.1 438 62.1
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 4.8e-152 542.0 475 59.4
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 4.8e-152 542.0 491 58.5
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 6.3e-152 541.6 448 61.4
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 2.4e-151 539.7 422 63.5
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 4.1e-151 538.9 419 63.5
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 5.3e-151 538.5 417 62.6
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 7.0e-151 538.1 415 65.1
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 9.1e-151 537.7 481 58.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 9.1e-151 537.7 413 63.7
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 1.6e-150 537.0 415 64.6
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 2.0e-150 536.6 417 64.0
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 2.6e-150 536.2 485 59.0
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.2e-149 533.1 417 61.9
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 5.0e-149 531.9 419 64.7
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 4.2e-148 528.9 421 62.7
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 4.2e-148 528.9 419 62.8
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.7e-147 526.2 457 59.5
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.6e-147 525.8 468 59.2
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.7e-147 525.4 413 61.5
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 8.0e-147 524.6 420 60.2
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.4e-146 523.9 430 60.7
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 5.2e-146 521.9 470 56.8
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 5.2e-146 521.9 421 62.0
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.1e-145 520.8 468 58.1
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.1e-145 520.8 405 64.2
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 2.0e-145 520.0 417 61.4
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.3e-145 519.2 421 59.9
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 3.3e-145 519.2 417 60.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 4.4e-145 518.8 418 59.8
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 9.7e-145 517.7 459 58.2
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 2.8e-144 516.2 416 61.8
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 1.1e-143 514.2 442 60.4
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.5e-142 509.2 426 59.2
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 5.9e-142 508.4 392 63.3
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 3.8e-141 505.8 414 62.1
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 6.5e-141 505.0 431 58.5
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 1.2e-139 500.7 431 58.5
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.6e-139 500.4 391 64.5
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 6.8e-138 495.0 515 53.2
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.5e-137 493.8 428 60.0
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 5.7e-137 491.9 369 64.5
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 4.8e-136 488.8 403 59.6
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 6.3e-136 488.4 373 64.6
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 9.1e-135 484.6 425 56.7
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 3.5e-134 482.6 426 58.0
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 7.7e-134 481.5 502 52.0
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 1.0e-133 481.1 492 52.6
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 2.9e-133 479.6 494 55.7
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 5.0e-133 478.8 422 58.5
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 3.6e-131 472.6 423 56.5
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 1.2e-129 467.6 441 55.6
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 1.3e-128 464.2 366 61.5
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 1.5e-124 450.7 364 60.7
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 2.3e-117 426.8 412 53.2
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.1e-116 424.5 420 52.4
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 2.1e-115 420.2 383 61.1
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 6.6e-101 372.1 419 48.4
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 1.2e-99 367.9 419 47.7
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 2.6e-97 360.1 282 66.0
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.3e-96 357.8 420 44.3
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 3.0e-93 346.7 435 41.6
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 1.1e-87 328.2 421 43.0
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 4.3e-84 316.2 298 53.0
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 9.6e-84 315.1 360 46.9
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 2.1e-83 313.9 408 41.9
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 8.4e-80 302.0 222 64.9
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 9.9e-73 278.5 246 61.0
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 1.0e-69 268.5 206 65.5
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 4.3e-68 263.1 254 54.3
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 1.5e-52 211.5 228 50.4
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 2.7e-46 190.7 456 31.4
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 1.1e-44 185.3 455 33.0
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.5e-41 174.9 106 75.5
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 9.1e-34 149.1 154 53.2
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 6.5e-32 142.9 101 67.3
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 3.6e-30 137.1 405 26.9
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 8.0e-30 136.0 106 62.3
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.0e-28 131.3 116 55.2
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 2.8e-27 127.5 116 54.3
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 1.9e-23 114.8 80 68.8
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 2.1e-22 111.3 137 51.8
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 4.2e-15 87.0 92 42.4
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.3e-13 81.3 69 55.1
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 9.8e-12 75.9 77 45.5
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 4.9e-11 73.6 51 78.4
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 2.4e-10 71.2 51 64.7
Os09g0514100 Oryza sativa ssp. japonica HOM05D006204 ORTHO05D007851 5.0e-08 63.5 119 40.3


User provided reference genes

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