Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00246 Eucalyptus grandis HOM05D006787 ORTHO05D008366 0.0e+00 1234.9 652 100.0
Dinv33252 Davidia involucrata HOM05D006787 ORTHO05D008366 5.0e-221 771.5 672 64.6
Thecc.05G000800 Theobroma cacao HOM05D006787 ORTHO05D008366 3.0e-218 762.3 660 62.6
Manes.01G009700 Manihot esculenta HOM05D006787 ORTHO05D008366 7.7e-214 747.7 670 62.2
Potri.017G001600 Populus trichocarpa HOM05D006787 ORTHO05D008366 2.9e-213 745.7 661 62.2
TAR636G3644 Trochodendron aralioides HOM05D006787 ORTHO05D008366 2.5e-212 742.7 663 63.2
CiPaw.02G125400 Carya illinoinensis HOM05D006787 ORTHO05D008366 7.2e-212 741.1 670 62.2
TWI63G1373 Tripterygium wilfordii HOM05D006787 ORTHO05D008366 9.4e-212 740.7 667 62.4
Lju124A5G21 Lonicera japonica HOM05D006787 ORTHO05D008366 2.3e-210 736.1 588 66.5
Nn7g37422 Nelumbo nucifera HOM05D006787 ORTHO05D008366 4.0e-210 735.3 661 62.9
Actinidia18386 Actinidia chinensis HOM05D006787 ORTHO05D003440 2.0e-209 733.0 692 60.4
Hma1.2p1_0000F.1_g000320 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 2.0e-209 733.0 604 64.7
QL10p064688 Quercus lobata HOM05D006787 ORTHO05D008366 2.6e-209 732.6 673 61.8
QL10p065815 Quercus lobata HOM05D006787 ORTHO05D008366 1.1e-207 727.2 673 61.7
MBI10_g27212_MAGBIO Magnolia biondii HOM05D006787 ORTHO05D008366 2.4e-207 726.1 614 64.7
Prupe.6G118500 Prunus persica HOM05D006787 ORTHO05D008366 3.1e-207 725.7 663 60.5
Haze_11111 Corylus avellana HOM05D006787 ORTHO05D008366 1.2e-206 723.8 660 62.6
Sabra17G0005700 Salix brachista HOM05D006787 ORTHO05D008366 3.8e-205 718.8 665 60.2
Duzib168G0144 Durio zibethinus HOM05D006787 ORTHO05D008366 6.6e-205 718.0 660 60.0
PGR142G3161 Punica granatum HOM05D006787 ORTHO05D008366 6.6e-205 718.0 690 60.9
Cpa.g.sc9.243 Carica papaya HOM05D006787 ORTHO05D008366 9.5e-204 714.1 584 66.1
AL4G27180 Arabidopsis lyrata HOM05D006787 ORTHO05D008366 2.1e-203 713.0 622 63.2
Aa31LG5G5150 Aethionema arabicum HOM05D006787 ORTHO05D008366 8.0e-203 711.1 603 64.5
FAN26G1372 Fragaria x ananassa HOM05D006787 ORTHO05D008366 6.8e-202 708.0 622 62.1
Cfa008529 Carpinus fangiana HOM05D006787 ORTHO05D008366 1.7e-200 703.4 549 69.0
ClCG06G009900 Citrullus lanatus HOM05D006787 ORTHO05D008366 1.7e-200 703.4 601 63.4
Carub.0004s1319 Capsella rubella HOM05D006787 ORTHO05D008366 3.7e-200 702.2 607 62.9
CARHR125600 Cardamine hirsuta HOM05D006787 ORTHO05D008366 4.9e-200 701.8 596 64.3
BraA03t11058Z Brassica rapa HOM05D000200 ORTHO05D000262 1.8e-199 699.9 637 61.7
BolC3t14481H Brassica oleracea HOM05D006787 ORTHO05D008366 2.4e-199 699.5 613 62.6
Gohir.D06G185000 Gossypium hirsutum HOM05D006787 ORTHO05D008366 4.1e-199 698.7 658 57.9
Sp4g14240 Schrenkiella parvula HOM05D006787 ORTHO05D008366 1.6e-198 696.8 634 61.5
Hund22687 Selenicereus undatus HOM05D006787 ORTHO05D008366 1.6e-198 696.8 584 63.5
Atru.chr3.1966 Acer truncatum HOM05D006787 ORTHO05D008366 2.7e-198 696.0 671 58.9
Thhalv10016356m.g Eutrema salsugineum HOM05D006787 ORTHO05D008366 3.5e-198 695.7 622 62.1
Gohir.A06G175100 Gossypium hirsutum HOM05D006787 ORTHO05D008366 6.6e-197 691.4 650 58.2
COL.COLO4_07294 Corchorus olitorius HOM05D006787 ORTHO05D008366 1.9e-196 689.9 640 59.2
MSTRG.11562 Avicennia marina HOM05D006787 ORTHO05D008366 9.5e-196 687.6 595 62.4
AT2G31890 Arabidopsis thaliana HOM05D006787 ORTHO05D008366 2.1e-195 686.4 619 62.4
THA.LOC104800940 Tarenaya hassleriana HOM05D006787 ORTHO05D008366 2.1e-195 686.4 609 62.4
CSS0000740 Camellia sinensis var. sinensis HOM05D006787 ORTHO05D008366 1.8e-194 683.3 611 62.4
Ciclev10019183m.g Citrus clementina HOM05D006787 ORTHO05D008366 5.2e-194 681.8 665 57.6
Gorai.010G216300 Gossypium raimondii HOM05D006787 ORTHO05D008366 5.2e-194 681.8 595 60.5
VMungo0331G0945 Vigna mungo HOM05D006787 ORTHO05D008366 1.5e-193 680.2 668 58.5
FvH4_1g00100 Fragaria vesca HOM05D006787 ORTHO05D008366 9.8e-193 677.6 625 60.0
RcHm_v2.0_Chr2g0084391 Rosa chinensis HOM05D006787 ORTHO05D008366 2.2e-192 676.4 621 59.7
Lalb_Chr10g0097341 Lupinus albus HOM05D006787 ORTHO05D008366 2.9e-192 676.0 600 62.2
EL10Ac3g06180 Beta vulgaris HOM05D006787 ORTHO05D008366 1.9e-191 673.3 634 57.4
Glyma.07G076000 Glycine max HOM05D006787 ORTHO05D008366 2.4e-191 672.9 666 58.1
Glyma.03G015700 Glycine max HOM05D006787 ORTHO05D008366 7.0e-191 671.4 673 57.4
FAN23G2311 Fragaria x ananassa HOM05D006787 ORTHO05D008366 1.2e-190 670.6 632 59.0
FAN28G0724 Fragaria x ananassa HOM05D006787 ORTHO05D008366 3.5e-190 669.1 635 58.9
AUR62023690 Chenopodium quinoa HOM05D006787 ORTHO05D008366 4.6e-190 668.7 571 61.8
Lj3g0015930 Lotus japonicus HOM05D006787 ORTHO05D008366 4.3e-188 662.1 669 57.0
Ca_25786_v3 Cicer arietinum L. HOM05D006787 ORTHO05D008366 7.3e-188 661.4 674 57.0
CANSAT56G3581 Cannabis sativa HOM05D006787 ORTHO05D008366 2.1e-187 659.8 599 61.6
Lsat_1_v5_gn_6_92560 Lactuca sativa HOM05D006787 ORTHO05D008366 2.1e-187 659.8 667 56.2
TPR.G1526 Trifolium pratense HOM05D006787 ORTHO05D008366 3.6e-187 659.1 594 60.8
Phvul.010G093100 Phaseolus vulgaris HOM05D006787 ORTHO05D008366 4.7e-187 658.7 680 55.4
Medtr8g432340 Medicago truncatula HOM05D006787 ORTHO05D008366 1.5e-185 653.7 667 56.1
MD11G1156300 Malus domestica HOM05D006787 ORTHO05D008366 3.4e-185 652.5 663 56.4
Nitab4.5_0006083g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 3.2e-183 646.0 640 56.6
Migut.O00275 Erythranthe guttata HOM05D006787 ORTHO05D008366 4.1e-183 645.6 618 57.6
PSO357G0106 Papaver somniferum HOM05D006787 ORTHO05D008366 7.8e-182 641.3 616 58.4
arahy.Tifrunner.gnm1.ann1.M1INQM Arachis hypogaea HOM05D006787 ORTHO05D008366 9.5e-180 634.4 625 56.6
CAN.G207.7 Capsicum annuum HOM05D006787 ORTHO05D008366 2.1e-179 633.3 591 57.5
Aqoxy4G00084 Aquilegia oxysepala HOM05D006787 ORTHO05D008366 2.8e-179 632.9 582 57.0
Cc03_g16180 Coffea canephora HOM05D006787 ORTHO05D008366 2.8e-179 632.9 589 59.3
arahy.Tifrunner.gnm1.ann1.RN5NMY Arachis hypogaea HOM05D006787 ORTHO05D008366 4.7e-179 632.1 617 57.4
GSVIVG01038263001 Vitis vinifera HOM05D006787 ORTHO05D008366 6.2e-179 631.7 445 75.1
Sopen12g008290 Solanum pennellii HOM05D006787 ORTHO05D008366 1.4e-178 630.6 583 58.1
Hma1.2p1_0000F.1_g000310 Hydrangea macrophylla HOM05D006787 ORTHO05D008366 5.2e-178 628.6 578 60.2
Peaxi162Scf00057g01911 Petunia axillaris HOM05D006787 ORTHO05D008366 5.2e-178 628.6 608 56.4
MELO3C008513.2 Cucumis melo HOM05D006787 ORTHO05D008366 8.9e-178 627.9 643 57.1
CsaV3_2G011300 Cucumis sativus L. HOM05D006787 ORTHO05D008366 3.4e-177 625.9 596 59.6
Solyc12g017510.2 Solanum lycopersicum HOM05D006787 ORTHO05D008366 3.4e-177 625.9 583 57.5
AUR62002496 Chenopodium quinoa HOM05D006787 ORTHO05D008366 1.3e-176 624.0 613 56.8
C03p21010 Brassica napus HOM05D006787 ORTHO05D008366 1.7e-176 623.6 570 61.6
A03p17910 Brassica napus HOM05D006787 ORTHO05D008366 4.9e-176 622.1 534 64.2
Nitab4.5_0005148g0010 Nicotiana tabacum HOM05D006787 ORTHO05D008366 2.4e-175 619.8 650 56.3
SGA_v2.0_scaffold25G10734 Striga asiatica HOM05D006787 ORTHO05D008366 2.4e-175 619.8 622 56.1
ATR0743G046 Amborella trichopoda HOM05D006787 ORTHO05D008366 7.8e-174 614.8 612 56.5
vmacro00728 Vaccinium macrocarpon HOM05D006787 ORTHO05D008366 7.8e-174 614.8 446 72.0
ECA248G2491 Erigeron canadensis HOM05D006787 ORTHO05D008366 3.3e-172 609.4 585 58.1
Psat4g152520 Pisum sativum HOM05D006787 ORTHO05D008366 1.2e-171 607.4 655 53.6
PGSC0003DMG400006459 Solanum tuberosum HOM05D006787 ORTHO05D008366 6.2e-171 605.1 629 53.6
Sc19g0002430 Simmondsia chinensis HOM05D006787 ORTHO05D008366 1.4e-170 604.0 629 56.0
HanXRQChr12g0374641 Helianthus annuus HOM05D006787 ORTHO05D008366 4.4e-169 599.0 578 57.4
Sed0010252 Sechium edule HOM05D006787 ORTHO05D008366 5.4e-167 592.0 542 62.7
HPP92_011440 Vanilla planifolia HOM05D006787 ORTHO05D008366 6.0e-166 588.6 575 55.7
SalBow5G4178 Salvia bowleyana HOM05D006787 ORTHO05D008366 8.1e-163 578.2 674 51.5
COL.COLO4_16044 Corchorus olitorius HOM05D006787 ORTHO05D008366 9.0e-162 574.7 592 54.4
Oeu014980.1 Olea europaea HOM05D006787 ORTHO05D008366 7.6e-161 571.6 560 57.1
TPR.G9807 Trifolium pratense HOM05D006787 ORTHO05D008366 1.3e-160 570.9 578 54.2
Os03g0425000 Oryza sativa ssp. japonica HOM05D006787 ORTHO05D008366 1.2e-158 564.3 555 56.2
Zm00001eb120920 Zea mays HOM05D006787 ORTHO05D008366 6.0e-150 535.4 597 53.4
unitig_22.g5322 Utricularia gibba HOM05D006787 ORTHO05D008366 2.3e-149 533.5 547 56.9
SEGI_12983 Sequoiadendron giganteum HOM05D006787 ORTHO05D008366 1.1e-124 451.4 610 46.4
BcaB01g04009 Brassica carinata HOM05D006787 ORTHO05D008366 5.3e-106 389.4 286 66.4
Mapoly0069s0042 Marchantia polymorpha HOM05D006787 ORTHO05D008366 4.9e-83 313.2 440 42.5
Mapoly0276s0001 Marchantia polymorpha HOM05D006787 ORTHO05D008366 4.9e-83 313.2 440 42.5
Pp3c3_28000 Physcomitrium patens HOM05D006787 ORTHO05D008366 2.1e-70 271.2 435 40.0
AagrBONN_evm.TU.Sc2ySwM_344.5468 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.1e-53 215.7 427 34.7
AagrBONN_evm.TU.Sc2ySwM_344.5464 Anthoceros agrestis HOM05D006787 ORTHO05D008366 1.3e-35 155.6 295 36.9
BcaC04g19536 Brassica carinata HOM05D006787 ORTHO05D008366 1.3e-35 155.6 145 57.9
SMO137G0272 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.2e-27 128.3 190 44.2
DCAR_027490 Daucus carota HOM05D004281 ORTHO05D004839 3.4e-20 104.4 112 50.0
CBR_g41140 Chara braunii HOM05D006787 ORTHO05D008366 4.6e-17 94.0 211 30.8
VMungo0720G2947 Vigna mungo HOM05D006787 ORTHO05D008366 6.1e-17 93.6 166 41.6
SMO134G0111 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 8.2e-14 83.2 282 29.8
SMO137G0071 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 1.7e-11 75.5 89 41.6
SMO137G0070 Selaginella moellendorffii HOM05D006787 ORTHO05D008366 2.2e-11 75.1 435 22.3
Cre09.g389541 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 6.5e-11 73.6 105 34.3
SMO137G0174 Selaginella moellendorffii HOM05D066076 ORTHO05D008366 7.2e-10 70.1 55 54.5
PRCOL_00001133 Prasinoderma coloniale HOM05D006787 ORTHO05D008366 4.6e-09 67.4 123 32.5
Cre10.g459350 Chlamydomonas reinhardtii HOM05D006787 ORTHO05D008366 1.4e-08 65.9 209 28.2


User provided reference genes

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