Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.7e-134 480.7 249 100.0
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 3.0e-97 359.0 197 94.9
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 2.2e-52 209.9 248 50.0
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.1e-48 197.6 251 47.8
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 2.8e-47 193.0 242 48.8
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 8.2e-47 191.4 243 46.9
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.1e-46 191.0 243 46.9
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 1.4e-46 190.7 242 48.3
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.8e-46 190.3 241 47.3
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 3.4e-45 186.0 240 48.8
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 1.0e-44 184.5 243 47.7
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 2.2e-44 183.3 245 45.7
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.9e-44 183.0 249 45.0
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 6.5e-44 181.8 248 45.6
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.1e-43 181.0 212 51.4
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 1.4e-43 180.6 242 48.3
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 1.4e-43 180.6 178 55.1
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 5.5e-43 178.7 242 44.6
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 9.3e-43 177.9 248 42.3
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 1.2e-42 177.6 252 45.6
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 1.2e-42 177.6 221 47.1
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.6e-42 177.2 237 46.8
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 6.0e-42 175.3 229 46.7
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 7.9e-42 174.9 236 44.5
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 6.7e-41 171.8 245 44.9
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 8.7e-41 171.4 177 53.1
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 4.3e-40 169.1 238 44.5
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 2.2e-39 166.8 216 48.6
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.2e-39 166.8 245 45.7
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 2.8e-39 166.4 206 48.1
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 6.3e-39 165.2 221 46.2
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 5.3e-38 162.2 237 44.7
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 9.0e-38 161.4 237 42.2
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 2.0e-37 160.2 244 43.9
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.5e-37 159.1 237 44.7
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 3.8e-36 156.0 178 47.8
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 5.0e-36 155.6 176 47.7
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.1e-35 154.5 176 51.7
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 7.9e-34 148.3 244 42.6
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 1.8e-33 147.1 249 39.4
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 2.3e-33 146.7 214 44.4
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 3.9e-33 146.0 211 44.1
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 8.8e-33 144.8 227 42.3
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 1.5e-32 144.1 257 37.4
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 5.7e-32 142.1 146 55.5
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 5.7e-32 142.1 178 48.3
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 7.4e-32 141.7 211 45.5
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 7.4e-32 141.7 248 39.1
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 1.3e-31 141.0 252 40.5
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 1.3e-31 141.0 188 46.3
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 1.3e-31 141.0 224 40.6
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 2.8e-31 139.8 213 42.7
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.8e-31 139.0 211 45.0
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 4.8e-31 139.0 249 39.0
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 8.2e-31 138.3 210 42.4
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 3.1e-30 136.3 235 40.9
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 4.1e-30 136.0 212 45.3
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 6.9e-30 135.2 238 38.2
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 6.9e-30 135.2 234 39.7
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 1.2e-29 134.4 230 40.4
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 2.6e-29 133.3 238 37.8
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 3.4e-29 132.9 253 38.3
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 4.5e-29 132.5 230 40.4
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 1.0e-28 131.3 247 34.8
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 1.3e-28 131.0 243 37.4
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.3e-28 131.0 215 38.1
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 2.2e-28 130.2 259 37.1
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 2.9e-28 129.8 269 36.8
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 5.0e-28 129.0 271 36.9
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 1.1e-27 127.9 203 40.9
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 1.1e-27 127.9 203 40.9
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 1.1e-27 127.9 203 40.9
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 1.1e-27 127.9 237 37.1
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 1.4e-27 127.5 183 45.9
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 4.2e-27 125.9 247 38.9
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 7.2e-27 125.2 201 40.3
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 7.2e-27 125.2 216 38.4
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 9.4e-27 124.8 205 39.5
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 2.7e-26 123.2 205 38.0
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 4.7e-26 122.5 243 37.4
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 6.1e-26 122.1 232 37.1
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 7.9e-26 121.7 248 36.3
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 7.9e-26 121.7 217 37.3
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 7.9e-26 121.7 217 37.3
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 1.4e-25 120.9 238 35.7
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.4e-25 120.9 219 38.4
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.8e-25 120.6 203 39.4
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.1e-24 117.9 201 40.3
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-24 117.5 221 36.7
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 7.4e-24 115.2 245 35.5
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 1.1e-22 111.3 157 42.0
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 3.4e-21 106.3 182 37.9
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 3.4e-21 106.3 203 36.9
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 7.7e-21 105.1 152 41.4
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 3.2e-19 99.8 119 47.1
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 1.6e-18 97.4 228 32.5
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 1.0e-17 94.7 109 49.5
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 2.3e-17 93.6 128 44.5
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 5.2e-17 92.4 242 33.1
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 3.3e-16 89.7 154 37.7
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 1.3e-15 87.8 219 34.7
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.7e-15 87.4 219 34.2
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 2.8e-15 86.7 206 33.5
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 4.8e-15 85.9 121 42.1
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.7e-12 77.4 220 29.5
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 1.7e-12 77.4 198 30.8
Zm00001eb370010 Zea mays HOM05D007216 ORTHO05D049898 6.1e-10 68.9 241 28.2
Os01g0773800 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D049898 5.3e-06 55.8 148 31.8


User provided reference genes

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