Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 2.2e-148 528.9 258 100.0
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 9.5e-115 417.2 254 79.9
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 9.5e-115 417.2 251 81.7
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.6e-114 416.4 255 82.7
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 4.7e-114 414.8 254 81.1
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.4e-113 413.3 259 80.7
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 3.0e-113 412.1 250 80.8
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 4.4e-112 408.3 252 79.4
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 2.9e-111 405.6 253 79.8
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 2.9e-111 405.6 250 80.0
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 3.7e-111 405.2 257 80.5
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 1.1e-110 403.7 282 75.2
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 4.1e-110 401.7 252 80.2
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 9.2e-110 400.6 252 78.2
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 1.2e-109 400.2 250 78.4
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 2.7e-109 399.1 232 83.6
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 2.7e-109 399.1 252 79.4
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 4.6e-109 398.3 270 76.3
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 7.8e-109 397.5 241 80.1
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 7.8e-109 397.5 250 78.4
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 1.0e-108 397.1 282 73.8
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.3e-108 396.7 261 75.9
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 3.9e-108 395.2 256 77.0
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 5.0e-108 394.8 230 81.3
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 6.6e-108 394.4 257 76.7
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 8.6e-108 394.0 252 77.4
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 2.5e-107 392.5 246 80.5
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 2.5e-107 392.5 255 75.7
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 3.3e-107 392.1 254 76.8
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 3.3e-107 392.1 229 83.0
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 4.3e-107 391.7 257 76.3
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 9.5e-107 390.6 259 74.9
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 2.8e-106 389.0 254 77.2
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 1.0e-105 387.1 251 78.5
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 1.4e-105 386.7 219 86.8
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 1.4e-105 386.7 244 78.3
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 2.3e-105 386.0 250 78.4
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 4.0e-105 385.2 251 76.5
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 5.2e-105 384.8 255 74.9
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 5.2e-105 384.8 255 74.9
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 8.9e-105 384.0 254 74.4
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 1.2e-104 383.6 257 73.9
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 1.2e-104 383.6 239 78.7
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 2.6e-104 382.5 259 76.1
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 3.4e-104 382.1 260 76.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 3.4e-104 382.1 231 80.1
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 9.8e-104 380.6 243 76.5
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 1.3e-103 380.2 242 75.2
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 6.4e-103 377.9 233 78.5
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.1e-102 377.1 254 76.0
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 3.2e-102 375.6 255 75.3
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 1.2e-101 373.6 240 75.8
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 3.5e-101 372.1 250 73.6
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 6.0e-101 371.3 250 75.6
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 7.8e-101 370.9 263 71.5
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 3.0e-100 369.0 228 76.8
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 3.9e-100 368.6 242 74.8
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 6.6e-100 367.9 261 70.5
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 1.1e-99 367.1 250 72.8
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.9e-99 366.3 245 74.7
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 1.9e-99 366.3 249 72.7
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.9e-99 366.3 275 68.7
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 2.1e-98 362.8 261 69.7
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 3.6e-98 362.1 264 68.2
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-97 360.5 254 72.0
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 1.4e-97 360.1 261 68.6
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 2.3e-97 359.4 255 70.6
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 2.3e-97 359.4 255 70.6
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 2.3e-97 359.4 259 69.1
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 6.8e-97 357.8 242 75.2
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 8.9e-97 357.5 209 84.2
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.2e-96 357.1 255 70.2
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 1.2e-96 357.1 209 83.7
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 1.5e-96 356.7 250 72.4
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 2.0e-96 356.3 249 72.7
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 2.0e-96 356.3 262 67.6
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 2.0e-96 356.3 262 67.6
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 2.0e-96 356.3 231 76.2
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.6e-96 355.9 250 72.0
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 9.8e-96 354.0 264 67.0
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 1.3e-95 353.6 331 57.7
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 1.7e-95 353.2 237 73.8
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.7e-95 353.2 250 71.6
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 1.7e-95 353.2 234 74.8
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 2.9e-95 352.4 238 73.9
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.9e-95 352.4 211 80.1
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 6.4e-95 351.3 229 72.5
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.4e-94 350.1 229 76.0
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 3.2e-94 349.0 254 68.9
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 4.1e-94 348.6 230 74.8
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 5.4e-94 348.2 249 70.7
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 5.4e-94 348.2 208 80.8
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 5.1e-92 341.7 245 71.8
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 5.1e-92 341.7 310 58.7
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 2.5e-91 339.3 213 79.8
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 2.1e-90 336.3 216 76.4
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 3.6e-90 335.5 208 79.3
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 4.0e-89 332.0 208 77.4
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.9e-86 323.2 198 78.8
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.1e-85 319.7 199 80.4
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 2.2e-79 299.7 306 55.2
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 4.6e-77 292.0 197 72.1
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 4.0e-73 278.9 174 78.7
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 1.1e-70 270.8 166 82.5
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 9.3e-70 267.7 225 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 3.8e-63 245.7 231 52.8
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 4.2e-62 242.3 150 76.7
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 2.1e-61 240.0 250 49.6
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 3.0e-60 236.1 229 53.7
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 1.7e-55 220.3 133 81.2
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 9.3e-54 214.5 139 77.7
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 7.9e-53 211.5 227 50.7
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 2.5e-46 189.9 143 66.4
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 9.3e-46 188.0 143 66.4
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 1.2e-45 187.6 143 65.7
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 4.6e-45 185.7 114 79.8
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 7.4e-43 178.3 172 55.2
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 1.6e-42 177.2 119 69.7
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 1.2e-37 161.0 96 82.3
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.8e-36 157.1 121 64.5
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 2.4e-33 146.7 95 76.8
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 2.6e-32 143.3 100 72.0
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 6.7e-28 128.6 101 62.4
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 8.0e-21 105.1 115 53.0
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 3.1e-17 93.2 47 87.2
PRCOL_00001745 Prasinoderma coloniale HOM05D005955 ORTHO05D007633 1.6e-13 80.9 174 29.9
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.5e-11 74.3 111 43.2
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.3e-10 71.2 111 42.3
Gohir.A03G127900 Gossypium hirsutum HOM05D005955 ORTHO05D033925 4.2e-06 56.2 46 67.4


User provided reference genes

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