Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02717 Eucalyptus grandis HOM05D005759 ORTHO05D007172 5.8e-214 747.3 372 100.0
Dinv31290 Davidia involucrata HOM05D005759 ORTHO05D007172 3.6e-99 365.9 365 54.2
Cfa011218 Carpinus fangiana HOM05D005759 ORTHO05D007172 8.9e-98 361.3 370 55.1
Haze_02624 Corylus avellana HOM05D005759 ORTHO05D007172 4.4e-97 359.0 364 56.0
QL04p040912 Quercus lobata HOM05D005759 ORTHO05D007172 1.4e-95 354.0 362 52.8
Hma1.2p1_0352F.1_g133040 Hydrangea macrophylla HOM05D005759 ORTHO05D007172 1.3e-93 347.4 394 49.7
COL.COLO4_35597 Corchorus olitorius HOM05D005759 ORTHO05D007172 1.7e-93 347.1 372 50.8
Actinidia34708 Actinidia chinensis HOM05D005759 ORTHO05D007172 5.0e-93 345.5 370 53.0
CiPaw.13G035800 Carya illinoinensis HOM05D005759 ORTHO05D007172 7.3e-92 341.7 353 53.8
Actinidia31089 Actinidia chinensis HOM05D005759 ORTHO05D007172 2.3e-90 336.7 367 52.9
CSS0028406 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 6.4e-88 328.6 365 52.3
Duzib114G0077 Durio zibethinus HOM05D005759 ORTHO05D007172 6.4e-88 328.6 365 50.1
Manes.07G091866 Manihot esculenta HOM05D005759 ORTHO05D007172 1.1e-87 327.8 363 51.0
Thecc.10G099000 Theobroma cacao HOM05D005759 ORTHO05D007172 3.2e-87 326.2 369 49.1
GSVIVG01034722001 Vitis vinifera HOM05D005759 ORTHO05D007172 4.1e-87 325.9 336 54.2
PGR142G1839 Punica granatum HOM05D005759 ORTHO05D007172 5.4e-87 325.5 348 53.7
TAR623G0127 Trochodendron aralioides HOM05D005759 ORTHO05D007172 7.1e-87 325.1 359 49.6
MELO3C019880.2 Cucumis melo HOM05D005759 ORTHO05D007172 9.2e-87 324.7 359 49.3
arahy.Tifrunner.gnm1.ann1.Y61W31 Arachis hypogaea HOM05D005759 ORTHO05D007172 1.6e-86 323.9 353 48.7
ClCG08G008080 Citrullus lanatus HOM05D005759 ORTHO05D007172 2.1e-86 323.6 361 49.9
RhsimUnG0061600 Rhododendron simsii HOM05D005759 ORTHO05D007172 2.1e-86 323.6 358 50.3
Gorai.011G232200 Gossypium raimondii HOM05D005759 ORTHO05D007172 4.6e-86 322.4 362 50.0
Rhsim09G0144200 Rhododendron simsii HOM05D005759 ORTHO05D007172 6.0e-86 322.0 355 50.7
Gohir.D10G206700 Gossypium hirsutum HOM05D005759 ORTHO05D007172 1.7e-85 320.5 362 49.7
CsaV3_2G032950 Cucumis sativus L. HOM05D005759 ORTHO05D007172 3.0e-85 319.7 357 50.7
Sed0025588 Sechium edule HOM05D005759 ORTHO05D007172 3.0e-85 319.7 369 46.3
arahy.Tifrunner.gnm1.ann1.0Q505S Arachis hypogaea HOM05D005759 ORTHO05D007172 8.6e-85 318.2 353 47.3
Potri.010G234000 Populus trichocarpa HOM05D005759 ORTHO05D007172 4.3e-84 315.8 358 50.6
Nn2g13981 Nelumbo nucifera HOM05D005759 ORTHO05D007172 4.7e-83 312.4 390 44.9
Phvul.007G245100 Phaseolus vulgaris HOM05D005759 ORTHO05D007172 8.1e-83 311.6 378 46.6
MBI17_g30596_MAGBIO Magnolia biondii HOM05D005759 ORTHO05D007172 2.3e-82 310.1 379 46.4
Lalb_Chr03g0036351 Lupinus albus HOM05D005759 ORTHO05D007172 8.9e-82 308.1 361 47.1
RcHm_v2.0_Chr1g0334181 Rosa chinensis HOM05D005759 ORTHO05D007172 2.6e-81 306.6 366 47.5
Sabra10G0181400 Salix brachista HOM05D005759 ORTHO05D007172 2.6e-81 306.6 360 49.2
Oeu059850.1 Olea europaea HOM05D005759 ORTHO05D007172 1.7e-80 303.9 334 48.8
Ciclev10031564m.g Citrus clementina HOM05D005759 ORTHO05D007172 2.2e-80 303.5 388 46.9
Lj5g0004167 Lotus japonicus HOM05D005759 ORTHO05D007172 6.4e-80 302.0 366 46.4
Glyma.02G165400 Glycine max HOM05D005759 ORTHO05D007172 3.2e-79 299.7 358 46.9
MD07G1072000 Malus domestica HOM05D005759 ORTHO05D007172 5.4e-79 298.9 366 46.2
TPR.G7613 Trifolium pratense HOM05D005759 ORTHO05D007172 7.1e-79 298.5 363 44.6
MD02G1244900 Malus domestica HOM05D005759 ORTHO05D007172 1.2e-78 297.7 376 44.9
THA.LOC104826349 Tarenaya hassleriana HOM05D005759 ORTHO05D007172 2.7e-78 296.6 348 48.9
Psat6g094520 Pisum sativum HOM05D005759 ORTHO05D007172 3.5e-78 296.2 360 45.0
vmacro10276 Vaccinium macrocarpon HOM05D005759 ORTHO05D007172 3.5e-78 296.2 335 49.0
VMungo0720G2821 Vigna mungo HOM05D005759 ORTHO05D007172 7.8e-78 295.0 368 44.0
CANSAT56G0546 Cannabis sativa HOM05D005759 ORTHO05D007172 1.7e-77 293.9 332 47.9
Aqoxy1G00957 Aquilegia oxysepala HOM05D005759 ORTHO05D007172 2.3e-77 293.5 359 46.0
TWI38G0593 Tripterygium wilfordii HOM05D005759 ORTHO05D007172 4.3e-76 289.3 359 47.6
Medtr1g050730 Medicago truncatula HOM05D005759 ORTHO05D007172 7.3e-76 288.5 350 44.0
Cc02_g10290 Coffea canephora HOM05D005759 ORTHO05D007172 3.6e-75 286.2 350 47.4
DCAR_030749 Daucus carota HOM05D005759 ORTHO05D007172 1.1e-74 284.6 337 47.2
Migut.F01660 Erythranthe guttata HOM05D005759 ORTHO05D007172 2.6e-73 280.0 333 47.7
HanXRQChr14g0456321 Helianthus annuus HOM05D005759 ORTHO05D007172 8.4e-72 275.0 322 45.0
MSTRG.409 Avicennia marina HOM05D005759 ORTHO05D007172 9.3e-71 271.6 318 47.5
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 1.6e-70 270.8 347 44.7
AUR62041532 Chenopodium quinoa HOM05D005759 ORTHO05D007172 1.6e-70 270.8 367 40.9
FvH4_7g06330 Fragaria vesca HOM05D005759 ORTHO05D007172 3.9e-69 266.2 329 44.1
CAN.G135.64 Capsicum annuum HOM05D005759 ORTHO05D007172 5.1e-69 265.8 342 44.2
Thhalv10016555m.g Eutrema salsugineum HOM05D005759 ORTHO05D007172 5.1e-69 265.8 350 42.9
FAN03G0647 Fragaria x ananassa HOM05D005759 ORTHO05D007172 6.6e-69 265.4 328 44.2
PGSC0003DMG400027344 Solanum tuberosum HOM05D005759 ORTHO05D007172 1.9e-68 263.8 327 43.1
SalBow6G0601 Salvia bowleyana HOM05D005759 ORTHO05D007172 2.5e-68 263.5 319 46.7
Solyc11g007610.2 Solanum lycopersicum HOM05D005759 ORTHO05D007172 2.5e-68 263.5 327 42.8
SGA_v2.0_scaffold13G06508 Striga asiatica HOM05D005759 ORTHO05D007172 2.5e-68 263.5 317 48.6
Nitab4.5_0002259g0090 Nicotiana tabacum HOM05D005759 ORTHO05D007172 7.3e-68 261.9 344 41.6
EL10Ac4g08636 Beta vulgaris HOM05D005759 ORTHO05D007172 9.6e-68 261.5 330 42.4
Sopen11g003460 Solanum pennellii HOM05D005759 ORTHO05D007172 1.3e-67 261.2 327 42.2
Atru.chr12.959 Acer truncatum HOM05D005759 ORTHO05D007172 1.6e-67 260.8 264 54.5
C03p92620 Brassica napus HOM05D005759 ORTHO05D007172 2.1e-67 260.4 347 42.7
Sc06g0002190 Simmondsia chinensis HOM05D005759 ORTHO05D007172 2.1e-67 260.4 328 43.3
Ah.04g163640 Amaranthus hybridus HOM05D005759 ORTHO05D007172 3.6e-67 259.6 324 42.0
FAN06G0090 Fragaria x ananassa HOM05D005759 ORTHO05D007172 3.6e-67 259.6 339 42.8
BcaC01g01514 Brassica carinata HOM05D005759 ORTHO05D007172 6.2e-67 258.8 347 42.7
Nitab4.5_0010486g0020 Nicotiana tabacum HOM05D005759 ORTHO05D007172 6.2e-67 258.8 330 42.1
Hund06749 Selenicereus undatus HOM05D005759 ORTHO05D007172 8.1e-67 258.5 344 42.7
BolC3t21576H Brassica oleracea HOM05D005759 ORTHO05D007172 1.4e-66 257.7 347 42.4
A08p00720 Brassica napus HOM05D005759 ORTHO05D007172 4.0e-66 256.1 347 42.7
BraA08t32129Z Brassica rapa HOM05D005759 ORTHO05D007172 4.0e-66 256.1 347 42.7
CDE04G0943 Ceratophyllum demersum HOM05D005759 ORTHO05D007172 9.0e-66 255.0 351 42.7
Lsat_1_v5_gn_2_102781 Lactuca sativa HOM05D005759 ORTHO05D007172 9.0e-66 255.0 298 46.3
AL4G23090 Arabidopsis lyrata HOM05D005759 ORTHO05D007172 5.8e-65 252.3 384 40.4
Carub.0004s0956 Capsella rubella HOM05D005759 ORTHO05D007172 1.3e-64 251.1 350 40.0
HPP92_024384 Vanilla planifolia HOM05D005759 ORTHO05D007172 1.7e-64 250.8 326 42.0
AT2G28600 Arabidopsis thaliana HOM05D005759 ORTHO05D007172 2.9e-64 250.0 351 39.6
Zm00001eb164020 Zea mays HOM05D005759 ORTHO05D007172 1.9e-63 247.3 357 40.3
CARHR121620 Cardamine hirsuta HOM05D005759 ORTHO05D007172 5.4e-63 245.7 381 40.2
BcaB04g16965 Brassica carinata HOM05D005759 ORTHO05D007172 1.2e-62 244.6 346 39.6
ECA238G2526 Erigeron canadensis HOM05D005759 ORTHO05D007172 1.2e-62 244.6 327 42.2
AUR62041544 Chenopodium quinoa HOM05D005759 ORTHO05D007172 4.6e-62 242.7 263 47.5
Migut.F00917 Erythranthe guttata HOM05D005759 ORTHO05D007172 2.4e-58 230.3 210 52.9
Os12g0147500 Oryza sativa ssp. japonica HOM05D005759 ORTHO05D007172 4.0e-58 229.6 366 39.3
ATR0820G119 Amborella trichopoda HOM05D005759 ORTHO05D007172 6.9e-58 228.8 365 38.4
Prupe.2G090100 Prunus persica HOM05D005759 ORTHO05D007172 2.0e-57 227.3 280 45.4
PSO339G3253 Papaver somniferum HOM05D005759 ORTHO05D007172 5.8e-57 225.7 326 39.9
FAN10G2875 Fragaria x ananassa HOM05D005759 ORTHO05D007172 7.6e-57 225.3 288 45.5
Peaxi162Scf00244g00007 Petunia axillaris HOM05D005759 ORTHO05D007172 3.8e-56 223.0 265 46.0
Sp4g11420 Schrenkiella parvula HOM05D005759 ORTHO05D007172 4.2e-55 219.5 383 37.9
PSO384G4559 Papaver somniferum HOM05D005759 ORTHO05D007172 5.5e-55 219.2 326 40.5
Duzib128G1757 Durio zibethinus HOM05D005759 ORTHO05D007172 9.3e-55 218.4 182 58.8
SalBow4G3335 Salvia bowleyana HOM05D005759 ORTHO05D007172 2.7e-54 216.9 199 52.3
SGA_v2.0_scaffold62G21347 Striga asiatica HOM05D005759 ORTHO05D007172 1.8e-53 214.2 221 48.0
unitig_736.g22320 Utricularia gibba HOM05D005759 ORTHO05D007172 2.3e-53 213.8 335 37.0
PSO063G1818 Papaver somniferum HOM05D005759 ORTHO05D007172 1.5e-52 211.1 243 45.3
HanXRQChr16g0513241 Helianthus annuus HOM05D005759 ORTHO05D007172 7.4e-52 208.8 259 43.2
unitig_899.g14480 Utricularia gibba HOM05D005759 ORTHO05D007172 3.2e-47 193.4 218 45.4
Nn6g35073 Nelumbo nucifera HOM05D005759 ORTHO05D007172 4.6e-46 189.5 309 38.2
Ca_06884_v3 Cicer arietinum L. HOM05D005759 ORTHO05D007172 2.8e-43 180.3 231 43.3
Zm00001eb086490 Zea mays HOM05D005759 ORTHO05D007172 2.3e-37 160.6 150 51.3
CSS0000330 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 2.0e-33 147.5 221 43.4
PSO170G6466 Papaver somniferum HOM05D005759 ORTHO05D007172 1.2e-30 138.3 290 35.5
Mapoly0120s0020 Marchantia polymorpha HOM05D005759 ORTHO05D007172 2.2e-27 127.5 406 26.1
Pp3c1_25970 Physcomitrium patens HOM05D005759 ORTHO05D007172 2.6e-25 120.6 362 27.6
Zm00001eb201540 Zea mays HOM05D005759 ORTHO05D007172 1.1e-20 105.1 92 52.2
GSVIVG01034723001 Vitis vinifera HOM05D005759 ORTHO05D007172 7.4e-20 102.4 107 54.2
AagrBONN_evm.TU.Sc2ySwM_228.2343 Anthoceros agrestis HOM05D005759 ORTHO05D007172 1.1e-18 98.6 384 25.5
SEGI_00328 Sequoiadendron giganteum HOM05D005759 ORTHO05D000001 1.1e-18 98.6 268 30.6
Peaxi162Scf00244g00111 Petunia axillaris HOM05D005759 ORTHO05D007172 7.2e-15 85.9 83 57.8
CSS0040532 Camellia sinensis var. sinensis HOM05D005759 ORTHO05D007172 9.4e-15 85.5 82 53.7
PSO339G2548 Papaver somniferum HOM05D005759 ORTHO05D007172 6.1e-14 82.8 134 38.8
Lsat_1_v5_gn_7_84341 Lactuca sativa HOM05D005759 ORTHO05D007172 3.0e-13 80.5 100 43.0
Cpa.g.sc720.1 Carica papaya HOM05D005759 ORTHO05D007172 5.7e-12 76.3 88 44.3
CBR_g23342 Chara braunii HOM05D005759 ORTHO05D002561 7.7e-09 65.9 197 27.9
SEGI_32992 Sequoiadendron giganteum HOM05D005759 ORTHO05D007172 6.5e-08 62.8 88 34.1
HanXRQChr06g0169121 Helianthus annuus HOM05D005759 ORTHO05D007172 5.5e-07 59.7 54 50.0
FAN01G1973 Fragaria x ananassa HOM05D005759 ORTHO05D007172 1.2e-06 58.5 88 42.0
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 2.1e-06 57.8 183 23.0
Ca_11766_v3 Cicer arietinum L. HOM05D001348 ORTHO05D002788 2.7e-06 57.4 37 70.3
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 3.6e-06 57.0 203 24.1


User provided reference genes

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