Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.5e-169 598.2 303 100.0
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 2.9e-147 525.4 303 86.1
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 4.9e-147 524.6 301 85.7
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 8.4e-147 523.9 301 85.7
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 1.9e-146 522.7 303 85.1
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.0e-144 516.9 303 84.5
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.8e-144 516.2 303 84.2
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 5.1e-144 514.6 303 84.2
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 5.1e-144 514.6 303 83.8
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 8.7e-144 513.8 303 83.5
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 1.1e-143 513.5 299 84.9
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.9e-143 512.7 303 83.5
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.5e-143 512.3 302 84.1
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 7.4e-143 510.8 303 81.8
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 1.6e-142 509.6 300 83.3
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 1.6e-142 509.6 302 82.8
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 2.1e-142 509.2 303 82.2
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.1e-142 509.2 303 81.2
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 2.1e-142 509.2 303 82.5
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 6.3e-142 507.7 302 82.5
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 8.2e-142 507.3 303 83.2
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.4e-141 506.5 303 81.5
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 2.4e-141 505.8 299 82.3
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 3.1e-141 505.4 300 82.7
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 3.1e-141 505.4 300 82.7
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 4.1e-141 505.0 303 81.2
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 4.1e-141 505.0 303 81.2
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 4.1e-141 505.0 300 84.0
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 6.9e-141 504.2 300 82.3
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 2.0e-140 502.7 303 80.9
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 2.0e-140 502.7 303 80.9
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 7.6e-140 500.7 303 81.8
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 1.0e-139 500.4 300 83.0
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 1.7e-139 499.6 303 81.8
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 2.9e-139 498.8 303 82.5
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 2.9e-139 498.8 303 80.9
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 2.9e-139 498.8 303 80.9
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.8e-139 498.4 303 82.2
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 3.8e-139 498.4 303 82.2
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 8.5e-139 497.3 303 79.5
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 2.5e-138 495.7 303 81.5
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 4.6e-137 491.5 303 79.9
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 6.1e-137 491.1 300 80.0
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 1.3e-136 490.0 299 79.3
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 6.7e-136 487.6 300 79.3
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 5.7e-135 484.6 303 79.2
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 7.4e-135 484.2 303 78.9
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 1.3e-134 483.4 303 78.9
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 3.7e-134 481.9 300 78.7
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 6.3e-134 481.1 300 79.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 8.2e-134 480.7 300 78.3
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 1.4e-133 479.9 303 76.6
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.1e-133 478.4 300 78.3
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 5.3e-133 478.0 303 77.6
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 1.5e-132 476.5 303 78.9
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 4.5e-132 474.9 300 77.7
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 5.0e-131 471.5 303 78.9
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.0e-131 471.5 292 78.1
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 7.2e-130 467.6 303 75.6
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 2.7e-129 465.7 303 75.2
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 7.9e-129 464.2 305 77.7
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 5.1e-128 461.5 293 78.2
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.6e-127 459.1 306 76.5
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 3.3e-127 458.8 305 75.4
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 7.4e-127 457.6 303 72.3
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 7.4e-127 457.6 311 74.6
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.3e-126 456.8 306 75.8
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 3.1e-125 452.2 303 75.2
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 9.1e-125 450.7 300 74.3
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 73.3
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 2.0e-124 449.5 301 73.4
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 1.0e-123 447.2 305 74.8
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 1.3e-123 446.8 300 74.0
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 2.9e-123 445.7 300 73.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 3.8e-123 445.3 275 80.4
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 5.0e-123 444.9 300 72.7
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 6.5e-123 444.5 300 72.7
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 2.5e-122 442.6 300 73.0
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 2.5e-122 442.6 306 71.9
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 3.2e-122 442.2 302 72.2
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 73.3
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 73.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 3.2e-122 442.2 303 73.6
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 5.5e-122 441.4 300 73.3
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.2e-121 440.3 300 72.0
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 2.7e-121 439.1 301 72.1
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 4.7e-121 438.3 300 72.7
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.8e-120 436.4 302 71.9
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 2.3e-120 436.0 302 72.2
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 71.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 3.0e-120 435.6 306 71.6
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 7.4e-119 431.0 287 73.9
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 9.7e-119 430.6 300 71.0
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 9.7e-119 430.6 300 71.0
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 9.7e-119 430.6 300 71.0
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 2.6e-111 406.0 249 78.3
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 9.7e-111 404.1 251 78.9
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 5.0e-107 391.7 302 66.2
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 6.3e-102 374.8 299 63.9
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 1.1e-101 374.0 224 81.2
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 1.1e-101 374.0 305 62.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 1.8e-101 373.2 215 83.7
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 3.1e-101 372.5 235 77.4
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 1.6e-100 370.2 249 71.5
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.3e-99 367.1 261 70.9
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 2.9e-99 365.9 234 76.1
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.7e-97 358.6 218 79.4
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 3.0e-96 355.9 219 80.8
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 5.2e-96 355.1 222 77.5
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 8.8e-96 354.4 255 69.4
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 1.5e-90 337.0 277 61.0
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 5.6e-82 308.5 303 57.1
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 9.5e-82 307.8 339 51.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 7.8e-76 288.1 173 78.0
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 7.1e-61 238.4 316 44.9
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 1.2e-47 194.5 143 69.9
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 3.4e-47 193.0 165 61.2
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 9.3e-45 184.9 343 38.5
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 5.6e-42 175.6 303 39.9
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 2.1e-41 173.7 177 53.1
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 4.0e-40 169.5 105 77.1
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 9.6e-34 148.3 88 76.1
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 2.5e-29 133.7 91 71.4
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 2.5e-26 123.6 86 72.1
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.5e-26 123.6 148 52.0
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 3.3e-26 123.2 72 79.2
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 3.3e-26 123.2 94 68.1
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 3.7e-25 119.8 350 30.9
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.0e-19 101.7 64 79.7
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 6.9e-16 89.0 55 65.5
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 3.6e-12 76.6 46 76.1


User provided reference genes

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