Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01934 Eucalyptus grandis HOM05D006427 ORTHO05D008147 4.2e-69 264.6 138 100.0
vmacro18378 Vaccinium macrocarpon HOM05D006427 ORTHO05D008147 5.2e-43 177.9 141 70.2
Rhsim08G0039400 Rhododendron simsii HOM05D006427 ORTHO05D008147 2.2e-38 162.5 139 66.2
QL02p069636 Quercus lobata HOM05D006427 ORTHO05D008147 2.9e-38 162.2 138 62.3
GSVIVG01032993001 Vitis vinifera HOM05D006427 ORTHO05D008147 1.5e-37 159.8 139 61.9
Haze_14945 Corylus avellana HOM05D006427 ORTHO05D008147 3.2e-37 158.7 142 57.7
Manes.04G092801 Manihot esculenta HOM05D006427 ORTHO05D008147 1.0e-35 153.7 143 65.7
Cpa.g.sc70.74 Carica papaya HOM05D006427 ORTHO05D008147 1.4e-35 153.3 135 61.5
arahy.Tifrunner.gnm1.ann1.YL5YHR Arachis hypogaea HOM05D006427 ORTHO05D008147 1.8e-35 152.9 141 58.2
Lj1g0026899 Lotus japonicus HOM05D006427 ORTHO05D008147 4.0e-35 151.8 141 58.2
arahy.Tifrunner.gnm1.ann1.BNAN8S Arachis hypogaea HOM05D006427 ORTHO05D008147 5.2e-35 151.4 140 57.1
CiPaw.03G002500 Carya illinoinensis HOM05D006427 ORTHO05D008147 9.8e-34 147.1 140 60.7
Phvul.001G085200 Phaseolus vulgaris HOM05D006427 ORTHO05D008147 2.2e-33 146.0 140 55.7
Gohir.D11G067900 Gossypium hirsutum HOM05D006427 ORTHO05D008147 2.8e-33 145.6 138 59.4
Gorai.007G072700 Gossypium raimondii HOM05D006427 ORTHO05D008147 2.8e-33 145.6 138 59.4
Thecc.04G047300 Theobroma cacao HOM05D006427 ORTHO05D008147 2.8e-33 145.6 141 59.6
TAR371G1278 Trochodendron aralioides HOM05D006427 ORTHO05D006987 2.8e-33 145.6 139 59.7
Glyma.16G049000 Glycine max HOM05D006427 ORTHO05D008147 1.1e-32 143.7 140 56.4
QL03p049638 Quercus lobata HOM05D006427 ORTHO05D008147 2.4e-32 142.5 138 58.7
Ciclev10017113m.g Citrus clementina HOM05D006427 ORTHO05D008147 4.1e-32 141.7 141 57.4
Nn4g22155 Nelumbo nucifera HOM05D006427 ORTHO05D008147 4.1e-32 141.7 140 56.4
CSS0005682 Camellia sinensis var. sinensis HOM05D006427 ORTHO05D008147 5.4e-32 141.4 140 56.4
VMungo1383G1825 Vigna mungo HOM05D006427 ORTHO05D008147 9.1e-32 140.6 140 54.3
Glyma.19G102400 Glycine max HOM05D006427 ORTHO05D008147 3.5e-31 138.7 140 54.3
Nn3g16291 Nelumbo nucifera HOM05D006427 ORTHO05D008147 4.5e-31 138.3 142 56.3
Gohir.A11G063600 Gossypium hirsutum HOM05D006427 ORTHO05D008147 7.7e-31 137.5 136 57.4
Ca_08136_v3 Cicer arietinum L. HOM05D006427 ORTHO05D008147 1.3e-30 136.7 142 55.6
Duzib132G1024 Durio zibethinus HOM05D006427 ORTHO05D008147 2.3e-30 136.0 140 58.6
Duzib264G1258 Durio zibethinus HOM05D006427 ORTHO05D008147 2.3e-30 136.0 141 57.4
Dinv19142 Davidia involucrata HOM05D006427 ORTHO05D008147 5.0e-30 134.8 145 51.7
PGR042G0015 Punica granatum HOM05D006427 ORTHO05D008147 6.6e-30 134.4 140 55.0
Cc11_g15110 Coffea canephora HOM05D006427 ORTHO05D008147 1.1e-29 133.7 137 54.0
Duzib052G1158 Durio zibethinus HOM05D006427 ORTHO05D008147 1.1e-29 133.7 141 56.7
vmacro10314 Vaccinium macrocarpon HOM05D000095 ORTHO05D008147 1.1e-29 133.7 126 56.3
CsaV3_6G007780 Cucumis sativus L. HOM05D006427 ORTHO05D008147 2.5e-29 132.5 137 51.8
Prupe.1G216700 Prunus persica HOM05D006427 ORTHO05D008147 2.5e-29 132.5 143 53.8
MELO3C022354.2 Cucumis melo HOM05D006427 ORTHO05D008147 3.3e-29 132.1 138 51.4
Sabra01G0046200 Salix brachista HOM05D006427 ORTHO05D008147 3.3e-29 132.1 135 57.8
THA.LOC104805303 Tarenaya hassleriana HOM05D006427 ORTHO05D008147 3.3e-29 132.1 130 61.5
Sed0027051 Sechium edule HOM05D006427 ORTHO05D008147 5.5e-29 131.3 143 53.1
CANSAT64G0982 Cannabis sativa HOM05D006427 ORTHO05D008147 7.2e-29 131.0 142 55.6
Potri.001G066400 Populus trichocarpa HOM05D006427 ORTHO05D008147 7.2e-29 131.0 135 57.0
FAN07G1740 Fragaria x ananassa HOM05D006427 ORTHO05D008147 9.5e-29 130.6 145 54.5
Psat3g093640 Pisum sativum HOM05D006427 ORTHO05D008147 9.5e-29 130.6 143 53.8
FAN17G2476 Fragaria x ananassa HOM05D006427 ORTHO05D006987 2.1e-28 129.4 145 53.8
MBI07_g07335_MAGBIO Magnolia biondii HOM05D006427 ORTHO05D008147 2.1e-28 129.4 138 55.1
FAN12G4324 Fragaria x ananassa HOM05D006427 ORTHO05D008147 4.7e-28 128.3 145 53.8
GSVIVG01004944001 Vitis vinifera HOM05D006427 ORTHO05D008147 4.7e-28 128.3 139 54.0
Medtr7g084000 Medicago truncatula HOM05D006427 ORTHO05D008147 6.1e-28 127.9 145 54.5
ClCG06G001750 Citrullus lanatus HOM05D006427 ORTHO05D006987 1.4e-27 126.7 144 51.4
Thecc.02G193800 Theobroma cacao HOM05D006427 ORTHO05D008147 4.0e-27 125.2 138 56.5
Thhalv10005093m.g Eutrema salsugineum HOM05D006427 ORTHO05D008147 6.8e-27 124.4 144 50.7
PSO478G1388 Papaver somniferum HOM05D006427 ORTHO05D008147 6.8e-27 124.4 139 53.2
MD16G1129900 Malus domestica HOM05D006427 ORTHO05D008147 8.9e-27 124.0 143 53.1
Gohir.D04G140100 Gossypium hirsutum HOM05D006427 ORTHO05D008147 1.5e-26 123.2 139 53.2
ATR0582G340 Amborella trichopoda HOM05D006427 ORTHO05D008147 2.0e-26 122.9 137 54.7
Manes.09G187300 Manihot esculenta HOM05D006427 ORTHO05D008147 2.0e-26 122.9 136 54.4
PSO017G1866 Papaver somniferum HOM05D006427 ORTHO05D008147 2.0e-26 122.9 140 51.4
Peaxi162Scf00128g01753 Petunia axillaris HOM05D006427 ORTHO05D008147 2.0e-26 122.9 139 51.1
MSTRG.3040 Avicennia marina HOM05D006427 ORTHO05D008147 2.6e-26 122.5 139 52.5
Gorai.012G125000 Gossypium raimondii HOM05D006427 ORTHO05D008147 4.4e-26 121.7 139 52.5
Atru.chr2.853 Acer truncatum HOM05D006427 ORTHO05D008147 9.8e-26 120.6 140 50.7
COL.COLO4_21789 Corchorus olitorius HOM05D006427 ORTHO05D008147 9.8e-26 120.6 142 54.2
CDE02G3326 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 1.7e-25 119.8 137 51.8
HPP92_021622 Vanilla planifolia HOM05D006427 ORTHO05D008147 1.7e-25 119.8 129 55.0
Hma1.2p1_1436F.1_g283150 Hydrangea macrophylla HOM05D006427 ORTHO05D008147 2.2e-25 119.4 165 45.5
BcaC04g23927 Brassica carinata HOM05D006427 ORTHO05D008147 3.7e-25 118.6 144 52.1
C09p03290 Brassica napus HOM05D006427 ORTHO05D008147 3.7e-25 118.6 144 52.1
Aqoxy5G03163 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 4.9e-25 118.2 146 48.6
Sp2g15860 Schrenkiella parvula HOM05D006427 ORTHO05D008147 4.9e-25 118.2 107 57.9
Eucgr.G01965 Eucalyptus grandis HOM05D006427 ORTHO05D008147 6.3e-25 117.9 135 48.9
CDE06G0025 Ceratophyllum demersum HOM05D006427 ORTHO05D008147 8.3e-25 117.5 137 51.8
Ciclev10006190m.g Citrus clementina HOM05D006427 ORTHO05D008147 8.3e-25 117.5 139 50.4
Gohir.A04G100800 Gossypium hirsutum HOM05D006427 ORTHO05D008147 8.3e-25 117.5 137 51.1
BcaB07g30216 Brassica carinata HOM05D006427 ORTHO05D008147 1.1e-24 117.1 146 51.4
A02p34710 Brassica napus HOM05D006427 ORTHO05D008147 1.1e-24 117.1 146 51.4
C02p53270 Brassica napus HOM05D006427 ORTHO05D008147 1.1e-24 117.1 146 50.0
TWI18G0640 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 1.4e-24 116.7 133 52.6
A09p03110 Brassica napus HOM05D001087 ORTHO05D001846 1.8e-24 116.3 133 52.6
BraA09t35950Z Brassica rapa HOM05D006427 ORTHO05D003553 1.8e-24 116.3 133 52.6
PGR119G1648 Punica granatum HOM05D006427 ORTHO05D008147 1.8e-24 116.3 164 44.5
CANSAT01G2059 Cannabis sativa HOM05D006427 ORTHO05D008147 4.1e-24 115.2 149 51.7
TWI36G1420 Tripterygium wilfordii HOM05D006427 ORTHO05D008147 5.4e-24 114.8 136 51.5
BraA02t08479Z Brassica rapa HOM05D006427 ORTHO05D008147 7.0e-24 114.4 144 50.0
CsaV3_3G027740 Cucumis sativus L. HOM05D006427 ORTHO05D008147 9.2e-24 114.0 149 51.7
Duzib187G0815 Durio zibethinus HOM05D006427 ORTHO05D008147 9.2e-24 114.0 140 55.7
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 1.6e-23 113.2 141 48.9
RhsimUnG0101500 Rhododendron simsii HOM05D006427 ORTHO05D008147 5.9e-23 111.3 79 65.8
Carub.0005s0476 Capsella rubella HOM05D006427 ORTHO05D008147 7.8e-23 110.9 141 50.4
Potri.003G163402 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.3e-22 109.4 118 54.2
SGA_v2.0_scaffold44G16952 Striga asiatica HOM05D006427 ORTHO05D008147 2.3e-22 109.4 136 50.0
Atru.chr12.1402 Acer truncatum HOM05D006427 ORTHO05D008147 3.9e-22 108.6 78 65.4
AL5G15590 Arabidopsis lyrata HOM05D006427 ORTHO05D008147 5.0e-22 108.2 140 51.4
AT3G26740 Arabidopsis thaliana HOM05D006427 ORTHO05D008147 5.0e-22 108.2 142 50.7
CARHR147760 Cardamine hirsuta HOM05D006427 ORTHO05D008147 1.1e-21 107.1 142 51.4
Atru.chr10.1283 Acer truncatum HOM05D006427 ORTHO05D008147 1.9e-21 106.3 137 47.4
Os01g0102900 Oryza sativa ssp. japonica HOM05D006427 ORTHO05D008147 1.9e-21 106.3 131 48.1
Lj3g0013404 Lotus japonicus HOM05D006427 ORTHO05D008147 3.3e-21 105.5 147 46.3
Atru.chr6.2655 Acer truncatum HOM05D006427 ORTHO05D008147 1.6e-20 103.2 70 70.0
Sopen09g034980 Solanum pennellii HOM05D006427 ORTHO05D008147 2.1e-20 102.8 83 61.4
Aa31LG2G5820 Aethionema arabicum HOM05D006427 ORTHO05D008147 2.8e-20 102.4 135 47.4
MELO3C014813.2 Cucumis melo HOM05D006427 ORTHO05D008147 6.1e-20 101.3 143 49.7
PGSC0003DMG400026417 Solanum tuberosum HOM05D006427 ORTHO05D008147 1.0e-19 100.5 145 46.2
SalBow4G2027 Salvia bowleyana HOM05D002416 ORTHO05D002554 1.4e-19 100.1 85 57.6
Potri.014G145500 Populus trichocarpa HOM05D006427 ORTHO05D008147 2.3e-19 99.4 117 53.8
SalBow4G0295 Salvia bowleyana HOM05D002416 ORTHO05D002554 8.9e-19 97.4 111 48.6
Solyc09g092110.4 Solanum lycopersicum HOM05D006427 ORTHO05D008147 1.5e-18 96.7 138 46.4
ECA234G1075 Erigeron canadensis HOM05D006427 ORTHO05D008147 4.4e-18 95.1 93 54.8
SEGI_30338 Sequoiadendron giganteum HOM05D006427 ORTHO05D008147 1.3e-17 93.6 147 46.3
Migut.F00015 Erythranthe guttata HOM05D006427 ORTHO05D008147 2.9e-17 92.4 135 44.4
HanXRQChr16g0499601 Helianthus annuus HOM05D006427 ORTHO05D008147 4.9e-17 91.7 134 44.0
COL.COLO4_13367 Corchorus olitorius HOM05D006427 ORTHO05D008147 1.1e-16 90.5 118 53.4
Atru.chr5.1933 Acer truncatum HOM05D006427 ORTHO05D008147 1.4e-16 90.1 77 57.1
Zm00001eb138400 Zea mays HOM05D000461 ORTHO05D008147 2.4e-16 89.4 88 50.0
Zm00001eb182180 Zea mays HOM05D006427 ORTHO05D008147 1.2e-15 87.0 85 51.8
Sc03g0004990 Simmondsia chinensis HOM05D006427 ORTHO05D008147 5.0e-14 81.6 104 50.0
CBR_g20422 Chara braunii HOM05D006427 ORTHO05D008147 6.6e-14 81.3 143 39.2
FvH4_4g22790 Fragaria vesca HOM05D006427 ORTHO05D008147 3.3e-13 79.0 120 46.7
Mapoly0029s0093 Marchantia polymorpha HOM05D006427 ORTHO05D008147 7.3e-13 77.8 79 48.1
Hund04203 Selenicereus undatus HOM05D006427 ORTHO05D008147 7.3e-13 77.8 72 54.2
RcHm_v2.0_Chr4g0429011 Rosa chinensis HOM05D006427 ORTHO05D008147 1.2e-12 77.0 118 45.8
Aqoxy5G03161 Aquilegia oxysepala HOM05D006427 ORTHO05D008147 1.6e-12 76.6 69 53.6
ClCG05G012680 Citrullus lanatus HOM05D006427 ORTHO05D008147 5.2e-11 71.6 115 47.8
Atru.chr9.488 Acer truncatum HOM05D006427 ORTHO05D008147 8.9e-11 70.9 72 48.6
Zm00001eb390880 Zea mays HOM05D001191 ORTHO05D000979 3.7e-09 65.5 84 44.0
Zm00001eb127000 Zea mays HOM05D006427 ORTHO05D008147 4.9e-09 65.1 113 39.8
EL10Ac6g13399 Beta vulgaris HOM05D006427 ORTHO05D008147 1.1e-08 63.9 112 40.2
BolC2t11399H Brassica oleracea HOM05D006427 ORTHO05D008147 9.2e-08 60.8 102 44.1


User provided reference genes

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