Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G00773 Eucalyptus grandis HOM05D006166 ORTHO05D007663 1.0e-246 856.3 436 100.0
PGR042G2317 Punica granatum HOM05D006166 ORTHO05D007663 3.0e-185 652.1 416 78.4
Cfa005611 Carpinus fangiana HOM05D006166 ORTHO05D007663 2.5e-184 649.0 437 75.5
CiPaw.05G036600 Carya illinoinensis HOM05D006166 ORTHO05D007663 6.4e-180 634.4 416 75.2
Thecc.02G140300 Theobroma cacao HOM05D006166 ORTHO05D007663 2.4e-179 632.5 411 75.9
Duzib132G0630 Durio zibethinus HOM05D006166 ORTHO05D007663 1.2e-178 630.2 423 73.8
CiPaw.06G152600 Carya illinoinensis HOM05D006166 ORTHO05D007663 5.1e-177 624.8 418 73.0
Gorai.013G062000 Gossypium raimondii HOM05D006166 ORTHO05D007663 4.3e-176 621.7 435 70.6
arahy.Tifrunner.gnm1.ann1.KS83Z6 Arachis hypogaea HOM05D006166 ORTHO05D007663 9.5e-176 620.5 414 72.2
COL.COLO4_24968 Corchorus olitorius HOM05D006166 ORTHO05D007663 9.5e-176 620.5 424 72.2
Glyma.08G073700 Glycine max HOM05D006166 ORTHO05D007663 2.8e-175 619.0 419 72.1
arahy.Tifrunner.gnm1.ann1.1L8CHD Arachis hypogaea HOM05D006166 ORTHO05D007663 1.8e-174 616.3 418 72.0
Glyma.05G118600 Glycine max HOM05D006166 ORTHO05D007663 4.0e-174 615.1 416 72.4
Phvul.002G207800 Phaseolus vulgaris HOM05D006166 ORTHO05D007663 4.0e-174 615.1 424 71.0
VMungo0251G2633 Vigna mungo HOM05D006166 ORTHO05D007663 5.2e-174 614.8 422 71.1
RcHm_v2.0_Chr2g0123601 Rosa chinensis HOM05D006166 ORTHO05D007663 8.9e-174 614.0 419 72.8
QL11p020534 Quercus lobata HOM05D006166 ORTHO05D007663 1.5e-173 613.2 425 70.4
Duzib248G0370 Durio zibethinus HOM05D006166 ORTHO05D007663 4.4e-173 611.7 403 75.4
Manes.14G166700 Manihot esculenta HOM05D006166 ORTHO05D007663 5.8e-173 611.3 422 71.8
Lalb_Chr10g0097721 Lupinus albus HOM05D006166 ORTHO05D007663 7.5e-173 610.9 436 70.0
Gohir.A13G066600 Gossypium hirsutum HOM05D006166 ORTHO05D007663 1.3e-172 610.1 424 71.2
CsaV3_7G006420 Cucumis sativus L. HOM05D006166 ORTHO05D007663 2.9e-172 609.0 409 71.4
FvH4_1g25470 Fragaria vesca HOM05D006166 ORTHO05D007663 2.9e-172 609.0 416 72.4
MELO3C018652.2 Cucumis melo HOM05D006166 ORTHO05D007663 3.7e-172 608.6 408 71.8
FAN26G0367 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.7e-172 608.6 416 72.4
FAN28G2956 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.7e-172 608.6 416 72.4
Prupe.8G062500 Prunus persica HOM05D006166 ORTHO05D007663 3.7e-172 608.6 419 72.6
Atru.chr6.1112 Acer truncatum HOM05D006166 ORTHO05D007663 4.9e-172 608.2 420 71.9
Lj4g0006983 Lotus japonicus HOM05D006166 ORTHO05D007663 8.3e-172 607.4 417 71.2
Cpa.g.sc42.78 Carica papaya HOM05D006166 ORTHO05D007663 1.4e-171 606.7 400 73.5
ClCG09G015330 Citrullus lanatus HOM05D006166 ORTHO05D007663 1.4e-171 606.7 407 72.5
TWI14G0161 Tripterygium wilfordii HOM05D006166 ORTHO05D007663 3.2e-171 605.5 419 72.1
FAN19G2366 Fragaria x ananassa HOM05D006166 ORTHO05D007663 3.5e-170 602.1 416 71.9
Ca_18343_v3 Cicer arietinum L. HOM05D006166 ORTHO05D007663 4.6e-170 601.7 422 69.9
Medtr4g094258 Medicago truncatula HOM05D006166 ORTHO05D007663 5.1e-169 598.2 420 69.8
TAR628G0634 Trochodendron aralioides HOM05D006166 ORTHO05D007663 5.1e-169 598.2 413 70.9
Sed0015493 Sechium edule HOM05D006166 ORTHO05D007663 1.1e-168 597.0 405 71.9
TPR.G10454 Trifolium pratense HOM05D006166 ORTHO05D007663 5.6e-168 594.7 421 69.4
MD10G1052200 Malus domestica HOM05D006166 ORTHO05D007663 7.3e-168 594.3 418 70.3
Potri.001G206400 Populus trichocarpa HOM05D006166 ORTHO05D007663 4.7e-167 591.7 407 72.7
Sabra01G0159700 Salix brachista HOM05D006166 ORTHO05D007663 6.2e-167 591.3 436 70.4
Sabra01G0159900 Salix brachista HOM05D006166 ORTHO05D007663 6.2e-167 591.3 436 70.4
Manes.06G010300 Manihot esculenta HOM05D006166 ORTHO05D007663 1.4e-166 590.1 414 69.6
Nn5g29064 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.4e-166 590.1 410 71.5
Ciclev10028390m.g Citrus clementina HOM05D006166 ORTHO05D007663 1.8e-166 589.7 435 68.5
CSS0045599 Camellia sinensis var. sinensis HOM05D006166 ORTHO05D007663 2.0e-165 586.3 405 70.6
CANSAT11G1721 Cannabis sativa HOM05D006166 ORTHO05D007663 1.7e-164 583.2 413 69.0
Cc02_g21650 Coffea canephora HOM05D006166 ORTHO05D007663 4.9e-164 581.6 414 69.3
Psat7g098480 Pisum sativum HOM05D006166 ORTHO05D007663 8.4e-164 580.9 421 67.7
MSTRG.16576 Avicennia marina HOM05D006166 ORTHO05D007663 4.2e-163 578.6 409 69.2
SalBow5G4894 Salvia bowleyana HOM05D006166 ORTHO05D007663 5.1e-161 571.6 419 69.0
Nn1g05303 Nelumbo nucifera HOM05D006166 ORTHO05D007663 1.5e-160 570.1 431 68.0
Oeu007956.1 Olea europaea HOM05D006166 ORTHO05D007663 3.3e-160 568.9 411 66.9
Rhsim11G0136200 Rhododendron simsii HOM05D006166 ORTHO05D007663 9.6e-160 567.4 415 67.0
Oeu026161.1 Olea europaea HOM05D006166 ORTHO05D007663 2.4e-158 562.8 419 64.4
Aqoxy6G00587 Aquilegia oxysepala HOM05D006166 ORTHO05D007663 9.0e-158 560.8 415 67.5
THA.LOC104807167 Tarenaya hassleriana HOM05D006166 ORTHO05D007663 1.4e-155 553.5 417 65.5
Peaxi162Scf00152g01019 Petunia axillaris HOM05D006166 ORTHO05D007663 5.4e-155 551.6 417 64.7
Migut.B00617 Erythranthe guttata HOM05D006166 ORTHO05D007663 7.1e-155 551.2 415 65.5
HanXRQChr11g0338151 Helianthus annuus HOM05D006166 ORTHO05D007663 7.1e-155 551.2 406 66.5
vmacro01821 Vaccinium macrocarpon HOM05D006166 ORTHO05D007663 1.2e-154 550.4 414 65.9
Lsat_1_v5_gn_7_80840 Lactuca sativa HOM05D006166 ORTHO05D007663 1.7e-153 546.6 403 66.0
ECA236G4484 Erigeron canadensis HOM05D006166 ORTHO05D007663 6.6e-153 544.7 406 66.0
SGA_v2.0_scaffold83G26295 Striga asiatica HOM05D006166 ORTHO05D007663 1.3e-151 540.4 476 59.5
AT2G13840 Arabidopsis thaliana HOM05D006166 ORTHO05D007663 2.8e-151 539.3 403 65.5
Actinidia00261 Actinidia chinensis HOM05D006166 ORTHO05D007663 3.6e-151 538.9 375 70.9
Sopen11g020300 Solanum pennellii HOM05D006166 ORTHO05D007663 3.6e-151 538.9 438 62.1
PGSC0003DMG400022942 Solanum tuberosum HOM05D006166 ORTHO05D007663 1.4e-150 537.0 406 65.3
Carub.0003s2824 Capsella rubella HOM05D006166 ORTHO05D007663 9.0e-150 534.3 403 64.8
BolC3t17880H Brassica oleracea HOM05D006166 ORTHO05D007663 1.2e-149 533.9 415 62.9
AL3G45670 Arabidopsis lyrata HOM05D006166 ORTHO05D007663 1.5e-149 533.5 397 65.7
PSO133G0062 Papaver somniferum HOM05D006166 ORTHO05D007663 1.5e-149 533.5 396 65.2
BcaC01g03110 Brassica carinata HOM05D006166 ORTHO05D007663 1.3e-148 530.4 400 64.5
Sp3g27280 Schrenkiella parvula HOM05D006166 ORTHO05D007663 1.7e-148 530.0 405 64.4
Lj5A240G38 Lonicera japonica HOM05D006166 ORTHO05D007663 2.2e-148 529.6 447 62.0
BcaB08g34548 Brassica carinata HOM05D006166 ORTHO05D007663 2.9e-148 529.3 398 65.3
C03p55960 Brassica napus HOM05D006166 ORTHO05D007663 4.9e-148 528.5 398 64.6
PSO541G1328 Papaver somniferum HOM05D006166 ORTHO05D007663 1.9e-147 526.6 402 63.7
AUR62013110 Chenopodium quinoa HOM05D006166 ORTHO05D007663 4.2e-147 525.4 427 61.1
Thhalv10022694m.g Eutrema salsugineum HOM05D006166 ORTHO05D007663 5.4e-147 525.0 403 63.8
Hund00054 Selenicereus undatus HOM05D006166 ORTHO05D007663 3.0e-145 519.2 412 62.1
A03p45110 Brassica napus HOM05D006166 ORTHO05D007663 5.1e-145 518.5 397 63.0
Hund06393 Selenicereus undatus HOM05D006166 ORTHO05D007663 2.5e-144 516.2 444 60.1
BraA03t13646Z Brassica rapa HOM05D006166 ORTHO05D007663 3.3e-144 515.8 397 62.5
GSVIVG01003077001 Vitis vinifera HOM05D006166 ORTHO05D007663 6.2e-143 511.5 318 76.7
MBI05_g32464_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 8.1e-143 511.1 438 58.4
unitig_26.g9064 Utricularia gibba HOM05D006166 ORTHO05D007663 1.5e-141 506.9 442 59.3
ATR0564G319 Amborella trichopoda HOM05D006166 ORTHO05D007663 1.3e-140 503.8 380 66.8
EL10Ac9g21463 Beta vulgaris HOM05D006166 ORTHO05D007663 2.9e-140 502.7 414 62.8
CDE05G0221 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.1e-139 500.7 372 64.5
Aa31LG8G12460 Aethionema arabicum HOM05D006166 ORTHO05D007663 4.2e-139 498.8 476 55.5
Gohir.D13G055000 Gossypium hirsutum HOM05D006166 ORTHO05D007663 3.5e-138 495.7 328 72.0
Nitab4.5_0001937g0070 Nicotiana tabacum HOM05D006166 ORTHO05D007663 2.2e-132 476.5 347 66.3
Nitab4.5_0000215g0090 Nicotiana tabacum HOM05D006166 ORTHO05D007663 2.9e-132 476.1 347 66.3
CAN.G924.1 Capsicum annuum HOM05D006166 ORTHO05D007663 1.9e-131 473.4 331 68.3
DCAR_009495 Daucus carota HOM05D000068 ORTHO05D000084 2.5e-131 473.0 323 71.8
Os03g0192000 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 5.3e-126 455.3 399 54.9
SEGI_35388 Sequoiadendron giganteum HOM05D006166 ORTHO05D007663 2.2e-124 449.9 432 52.5
FAN23G1673 Fragaria x ananassa HOM05D006166 ORTHO05D007663 7.9e-122 441.4 296 72.0
AUR62010115 Chenopodium quinoa HOM05D006166 ORTHO05D007663 2.7e-114 416.4 307 64.8
HPP92_016815 Vanilla planifolia HOM05D006166 ORTHO05D007663 3.0e-113 412.9 348 58.3
Os02g0752600 Oryza sativa ssp. japonica HOM05D006166 ORTHO05D007663 1.7e-108 397.1 350 58.3
Mapoly0026s0056 Marchantia polymorpha HOM05D006166 ORTHO05D007663 2.1e-106 390.2 356 53.4
Sc14g0003300 Simmondsia chinensis HOM05D006166 ORTHO05D007663 1.8e-105 387.1 281 68.0
CARHR104670 Cardamine hirsuta HOM05D006166 ORTHO05D007663 1.1e-102 377.9 278 67.3
Dinv24200 Davidia involucrata HOM05D006166 ORTHO05D007663 8.5e-100 368.2 412 49.8
SMO174G0124 Selaginella moellendorffii HOM05D006166 ORTHO05D007663 8.0e-98 361.7 295 59.0
Cfa005618 Carpinus fangiana HOM05D006166 ORTHO05D007663 8.8e-97 358.2 303 61.7
AagrBONN_evm.TU.Sc2ySwM_117.2616 Anthoceros agrestis HOM05D006166 ORTHO05D007663 3.7e-95 352.8 309 55.3
Pp3c6_6030 Physcomitrium patens HOM05D006166 ORTHO05D007663 8.5e-92 341.7 306 57.2
Haze_10674 Corylus avellana HOM05D006166 ORTHO05D007663 2.7e-90 336.7 320 57.2
Cc03_g14510 Coffea canephora HOM05D006166 ORTHO05D007663 6.1e-90 335.5 333 54.7
MBI02_g36658_MAGBIO Magnolia biondii HOM05D006166 ORTHO05D007663 8.0e-90 335.1 299 55.5
Ah.01g009510 Amaranthus hybridus HOM05D006166 ORTHO05D007663 2.3e-89 333.6 244 65.2
Solyc11g044800.3 Solanum lycopersicum HOM05D006166 ORTHO05D007663 7.5e-80 302.0 215 70.2
Pp3c6_6031 Physcomitrium patens HOM05D006166 ORTHO05D007663 6.6e-76 288.9 269 55.0
Glyma.17G217500 Glycine max HOM05D006166 ORTHO05D007663 4.7e-74 282.7 184 70.7
Zm00001eb007010 Zea mays HOM05D006166 ORTHO05D007663 4.7e-74 282.7 261 53.6
Dinv09040 Davidia involucrata HOM05D006166 ORTHO05D007663 5.8e-72 275.8 158 83.5
CDE05G0065 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 1.9e-59 234.2 238 47.9
Ciclev10013528m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.7e-53 213.8 175 62.3
Ciclev10033347m.g Citrus clementina HOM05D006166 ORTHO05D007663 2.0e-48 197.6 144 68.8
Haze_10680 Corylus avellana HOM05D006166 ORTHO05D007663 2.6e-40 170.6 130 63.1
Haze_10658 Corylus avellana HOM05D006166 ORTHO05D007663 3.8e-39 166.8 124 62.1
Pp3s70_110 Physcomitrium patens HOM05D006166 ORTHO05D007663 8.4e-39 165.6 282 35.1
Haze_10661 Corylus avellana HOM05D006166 ORTHO05D007663 6.9e-33 146.0 192 47.9
Dinv09041 Davidia involucrata HOM05D006166 ORTHO05D000293 2.0e-32 144.4 118 66.9
SHI16502 Sapria himalayana HOM05D006166 ORTHO05D007663 3.5e-21 107.1 200 34.5
CDE05G1058 Ceratophyllum demersum HOM05D006166 ORTHO05D007663 8.2e-18 95.9 58 77.6
Haze_10677 Corylus avellana HOM05D006166 ORTHO05D007663 7.9e-13 79.3 44 79.5


User provided reference genes

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