Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04126 Eucalyptus grandis HOM05D007304 ORTHO05D009233 1.6e-103 379.4 190 100.0
Dinv41708 Davidia involucrata HOM05D007304 ORTHO05D009233 1.9e-59 233.0 199 60.8
Cfa018186 Carpinus fangiana HOM05D007304 ORTHO05D009233 1.2e-58 230.3 199 59.8
Actinidia29417 Actinidia chinensis HOM05D004490 ORTHO05D005353 1.3e-57 226.9 201 61.7
QL02p033889 Quercus lobata HOM05D007304 ORTHO05D009233 3.9e-57 225.3 200 57.5
CSS0049262 Camellia sinensis var. sinensis HOM05D007304 ORTHO05D009233 1.5e-56 223.4 199 58.8
Manes.02G191500 Manihot esculenta HOM05D007304 ORTHO05D009233 3.3e-56 222.2 199 56.8
Potri.013G113500 Populus trichocarpa HOM05D007304 ORTHO05D009233 7.3e-56 221.1 199 58.3
Haze_17932 Corylus avellana HOM05D007304 ORTHO05D009233 1.3e-55 220.3 144 71.5
RhsimUnG0069500 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.3e-55 220.3 171 64.9
MD05G1041300 Malus domestica HOM05D007304 ORTHO05D009233 2.8e-55 219.2 149 69.1
Sabra13G0096200 Salix brachista HOM05D007304 ORTHO05D009233 4.8e-55 218.4 177 62.1
COL.COLO4_22675 Corchorus olitorius HOM05D007304 ORTHO05D009233 6.2e-55 218.0 144 70.1
Thecc.08G182300 Theobroma cacao HOM05D007304 ORTHO05D009233 6.2e-55 218.0 197 58.4
Rhsim11G0060100 Rhododendron simsii HOM05D007304 ORTHO05D009233 1.1e-54 217.2 196 60.7
Ciclev10002467m.g Citrus clementina HOM05D007304 ORTHO05D009233 3.1e-54 215.7 195 55.4
CANSAT25G3778 Cannabis sativa HOM05D007304 ORTHO05D009233 6.9e-54 214.5 198 56.1
Duzib177G0769 Durio zibethinus HOM05D007304 ORTHO05D009233 6.9e-54 214.5 198 56.1
RcHm_v2.0_Chr7g0219041 Rosa chinensis HOM05D007304 ORTHO05D009233 9.0e-54 214.2 199 57.3
Ca_10612_v3 Cicer arietinum L. HOM05D007304 ORTHO05D009233 1.2e-53 213.8 199 58.3
PGR102G2268 Punica granatum HOM05D007304 ORTHO05D009233 1.5e-53 213.4 204 54.4
CAN.G1530.5 Capsicum annuum HOM05D007304 ORTHO05D009233 2.0e-53 213.0 197 56.3
Medtr1g096340 Medicago truncatula HOM05D007304 ORTHO05D009233 3.4e-53 212.2 197 57.4
THA.LOC104816302 Tarenaya hassleriana HOM05D007304 ORTHO05D009233 3.4e-53 212.2 189 57.1
GSVIVG01034475001 Vitis vinifera HOM05D007304 ORTHO05D009233 3.4e-53 212.2 197 56.3
CiPaw.16G062000 Carya illinoinensis HOM05D007304 ORTHO05D009233 4.4e-53 211.8 199 56.3
Hund27084 Selenicereus undatus HOM05D007304 ORTHO05D009233 4.4e-53 211.8 155 65.2
arahy.Tifrunner.gnm1.ann1.W17VPE Arachis hypogaea HOM05D007304 ORTHO05D009233 5.8e-53 211.5 195 57.4
Phvul.007G089900 Phaseolus vulgaris HOM05D007304 ORTHO05D009233 5.8e-53 211.5 195 55.9
Peaxi162Scf00310g00614 Petunia axillaris HOM05D007304 ORTHO05D009233 7.6e-53 211.1 198 56.6
TWI32G0836 Tripterygium wilfordii HOM05D007304 ORTHO05D009233 7.6e-53 211.1 197 59.4
arahy.Tifrunner.gnm1.ann1.E78XAF Arachis hypogaea HOM05D007304 ORTHO05D009233 9.9e-53 210.7 195 56.9
Sopen11g009380 Solanum pennellii HOM05D007304 ORTHO05D009233 9.9e-53 210.7 198 55.6
Nitab4.5_0000422g0040 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.3e-52 210.3 199 56.3
DCAR_011537 Daucus carota HOM05D007304 ORTHO05D009233 1.7e-52 209.9 144 68.1
TPR.G8829 Trifolium pratense HOM05D007304 ORTHO05D009233 1.7e-52 209.9 199 55.8
MSTRG.22445 Avicennia marina HOM05D007304 ORTHO05D009233 2.9e-52 209.1 200 54.0
Lj5g0021067 Lotus japonicus HOM05D007304 ORTHO05D009233 2.9e-52 209.1 203 53.7
Lalb_Chr06g0162071 Lupinus albus HOM05D007304 ORTHO05D009233 2.9e-52 209.1 199 55.3
TAR376G0332 Trochodendron aralioides HOM05D007304 ORTHO05D009233 2.9e-52 209.1 147 68.0
FAN04G0833 Fragaria x ananassa HOM05D007304 ORTHO05D009233 4.9e-52 208.4 199 56.3
PGSC0003DMG400009226 Solanum tuberosum HOM05D007304 ORTHO05D009233 6.4e-52 208.0 198 55.1
FAN13G2406 Fragaria x ananassa HOM05D007304 ORTHO05D009233 8.4e-52 207.6 199 56.3
FvH4_5g27630 Fragaria vesca HOM05D007304 ORTHO05D009233 1.4e-51 206.8 199 55.8
Nitab4.5_0000560g0190 Nicotiana tabacum HOM05D007304 ORTHO05D009233 1.9e-51 206.5 199 56.3
ClCG11G008190 Citrullus lanatus HOM05D007304 ORTHO05D009233 2.4e-51 206.1 202 53.0
Glyma.20G175900 Glycine max HOM05D007304 ORTHO05D009233 2.4e-51 206.1 199 55.3
Ah.07g202740 Amaranthus hybridus HOM05D007304 ORTHO05D009233 4.2e-51 205.3 183 59.0
SalBow6G2896 Salvia bowleyana HOM05D007304 ORTHO05D009233 5.4e-51 204.9 199 53.3
Migut.N03345 Erythranthe guttata HOM05D007304 ORTHO05D009233 7.1e-51 204.5 198 54.5
AUR62023569 Chenopodium quinoa HOM05D007304 ORTHO05D009233 9.3e-51 204.1 200 55.5
Gorai.005G074700 Gossypium raimondii HOM05D007304 ORTHO05D009233 9.3e-51 204.1 196 57.1
Sed0026932 Sechium edule HOM05D007304 ORTHO05D009233 9.3e-51 204.1 187 56.1
AUR62004650 Chenopodium quinoa HOM05D007304 ORTHO05D009233 1.2e-50 203.8 197 56.3
SGA_v2.0_scaffold149G36602 Striga asiatica HOM05D007304 ORTHO05D009233 1.2e-50 203.8 191 57.1
Nn5g27732 Nelumbo nucifera HOM05D007304 ORTHO05D009233 2.1e-50 203.0 183 56.8
AL6G43210 Arabidopsis lyrata HOM05D007304 ORTHO05D009233 2.7e-50 202.6 197 53.8
Gohir.A02G060400 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.7e-50 202.6 196 56.1
Gohir.D02G065833 Gossypium hirsutum HOM05D007304 ORTHO05D009233 2.7e-50 202.6 165 63.0
VMungo0720G1999 Vigna mungo HOM05D007304 ORTHO05D009233 2.7e-50 202.6 199 54.8
Lj4P501T9 Lonicera japonica HOM05D007304 ORTHO05D009233 3.5e-50 202.2 147 67.3
Atru.chr13.1788 Acer truncatum HOM05D007304 ORTHO05D009233 4.6e-50 201.8 198 53.5
Atru.chr13.1792 Acer truncatum HOM05D007304 ORTHO05D009233 4.6e-50 201.8 198 53.5
MELO3C008119.2 Cucumis melo HOM05D007304 ORTHO05D009233 1.0e-49 200.7 202 54.5
EL10Ac8g20249 Beta vulgaris HOM05D007304 ORTHO05D009233 1.3e-49 200.3 167 61.1
BraA03t12064Z Brassica rapa HOM05D007304 ORTHO05D009233 1.3e-49 200.3 197 54.3
Cc10_g11390 Coffea canephora HOM05D007304 ORTHO05D009233 1.3e-49 200.3 175 54.9
CsaV3_2G033470 Cucumis sativus L. HOM05D007304 ORTHO05D009233 6.6e-49 198.0 199 54.8
Thhalv10028979m.g Eutrema salsugineum HOM05D007304 ORTHO05D009233 6.6e-49 198.0 189 53.4
BcaC01g04711 Brassica carinata HOM05D007304 ORTHO05D009233 8.7e-49 197.6 197 54.8
A03p28640 Brassica napus HOM05D007304 ORTHO05D009233 1.5e-48 196.8 197 53.3
C03p34620 Brassica napus HOM05D007304 ORTHO05D009233 1.9e-48 196.4 197 54.3
BolC3t15773H Brassica oleracea HOM05D007304 ORTHO05D009233 1.9e-48 196.4 197 54.3
Psat6g187320 Pisum sativum HOM05D007304 ORTHO05D009233 1.9e-48 196.4 201 53.7
AT4G09620 Arabidopsis thaliana HOM05D007304 ORTHO05D009233 3.3e-48 195.7 195 53.8
Carub.0006s2806 Capsella rubella HOM05D007304 ORTHO05D009233 3.3e-48 195.7 195 53.3
CARHR260470 Cardamine hirsuta HOM05D007304 ORTHO05D009233 4.3e-48 195.3 192 53.6
Aqoxy5G02599 Aquilegia oxysepala HOM05D007304 ORTHO05D009233 5.6e-48 194.9 180 56.7
Oeu039601.1 Olea europaea HOM05D007304 ORTHO05D009233 1.3e-47 193.7 193 52.8
PSO017G3329 Papaver somniferum HOM05D007304 ORTHO05D009233 3.6e-47 192.2 192 52.1
Sp6g07990 Schrenkiella parvula HOM05D007304 ORTHO05D009233 6.2e-47 191.4 198 53.5
PSO063G3154 Papaver somniferum HOM05D007304 ORTHO05D009233 8.1e-47 191.0 192 51.6
Lsat_1_v5_gn_6_109640 Lactuca sativa HOM05D007304 ORTHO05D009233 9.9e-45 184.1 196 50.0
ECA246G3843 Erigeron canadensis HOM05D007304 ORTHO05D009233 6.4e-44 181.4 123 69.1
MBI17_g27205_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 1.4e-43 180.3 144 61.1
HPP92_003142 Vanilla planifolia HOM05D007304 ORTHO05D009233 2.1e-42 176.4 164 54.9
Aa31LG9G14900 Aethionema arabicum HOM05D007304 ORTHO05D009233 2.7e-42 176.0 193 50.3
HanXRQChr05g0150521 Helianthus annuus HOM05D007304 ORTHO05D009233 6.0e-42 174.9 191 49.2
Sc26g0000380 Simmondsia chinensis HOM05D007304 ORTHO05D009233 6.0e-42 174.9 145 54.5
SEGI_32747 Sequoiadendron giganteum HOM05D007304 ORTHO05D009233 7.9e-42 174.5 123 65.9
Cpa.g.sc66.48 Carica papaya HOM05D007304 ORTHO05D009233 4.0e-38 162.2 134 60.4
Zm00001eb063940 Zea mays HOM05D007304 ORTHO05D009233 4.0e-38 162.2 133 60.2
BcaB01g02784 Brassica carinata HOM05D007304 ORTHO05D009233 2.2e-36 156.4 117 62.4
Os03g0838900 Oryza sativa ssp. japonica HOM05D007304 ORTHO05D009233 2.8e-31 139.4 146 50.0
unitig_21.g20192 Utricularia gibba HOM05D007304 ORTHO05D009233 3.1e-30 136.0 128 51.6
SMO200G0124 Selaginella moellendorffii HOM05D007304 ORTHO05D009233 9.0e-30 134.4 117 50.4
Prupe.8G057100 Prunus persica HOM05D007304 ORTHO05D009233 2.2e-28 129.8 143 51.0
Mapoly0175s0009 Marchantia polymorpha HOM05D007304 ORTHO05D009233 1.6e-26 123.6 126 42.1
AagrBONN_evm.TU.Sc2ySwM_117.12 Anthoceros agrestis HOM05D007304 ORTHO05D009233 1.0e-25 120.9 159 42.1
CDE02G2755 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 6.3e-23 111.7 68 76.5
SalBow6G1917 Salvia bowleyana HOM05D007304 ORTHO05D009233 1.8e-22 110.2 138 44.2
Pp3c24_12240 Physcomitrium patens HOM05D007304 ORTHO05D009233 3.4e-21 105.9 170 38.8
Cre10.g445100 Chlamydomonas reinhardtii HOM05D007304 ORTHO05D009233 2.0e-16 90.1 150 32.0
MBI11_g39361_MAGBIO Magnolia biondii HOM05D007304 ORTHO05D009233 2.6e-13 79.7 51 74.5
MCO03G180 Micromonas commoda HOM05D007304 ORTHO05D009233 1.0e-12 77.8 178 32.6
MD10G1047700 Malus domestica HOM05D007304 ORTHO05D009233 3.8e-12 75.9 44 75.0
Solyc11g017430.3 Solanum lycopersicum HOM05D007304 ORTHO05D009233 3.3e-08 62.8 34 76.5
Zm00001eb272990 Zea mays HOM05D007304 ORTHO05D009233 1.7e-07 60.5 47 57.4


User provided reference genes

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