Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F04065 Eucalyptus grandis HOM05D000912 ORTHO05D011835 2.3e-51 205.3 105 100.0
Eucgr.E00712 Eucalyptus grandis HOM05D000912 ORTHO05D011835 1.6e-28 129.4 96 74.0
Eucgr.E00932 Eucalyptus grandis HOM05D000912 ORTHO05D011835 4.7e-28 127.9 96 74.0
Eucgr.E00691 Eucalyptus grandis HOM05D000912 ORTHO05D011835 1.3e-25 119.8 98 66.3
Psat7g264600 Pisum sativum HOM05D000912 ORTHO05D001232 7.7e-15 84.0 108 42.6
Glyma.08G226700 Glycine max HOM05D000912 ORTHO05D001232 2.2e-14 82.4 102 44.1
arahy.Tifrunner.gnm1.ann1.PZ05LS Arachis hypogaea HOM05D000912 ORTHO05D001232 2.9e-14 82.0 108 45.4
Phvul.010G165900 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 6.5e-14 80.9 102 44.1
CANSAT01G3172 Cannabis sativa HOM05D000912 ORTHO05D001232 8.5e-14 80.5 104 48.1
arahy.Tifrunner.gnm1.ann1.DM6RAW Arachis hypogaea HOM05D000912 ORTHO05D001232 1.1e-13 80.1 108 44.4
Ca_03788_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 1.1e-13 80.1 108 42.6
Lj3g0006194 Lotus japonicus HOM05D000912 ORTHO05D001232 1.9e-13 79.3 108 43.5
PGR102G0551 Punica granatum HOM05D000912 ORTHO05D001232 5.5e-13 77.8 108 50.0
Potri.014G000500 Populus trichocarpa HOM05D000912 ORTHO05D001232 2.7e-12 75.5 104 45.2
Glyma.07G000400 Glycine max HOM05D000912 ORTHO05D001232 4.7e-12 74.7 98 43.9
Lalb_Chr19g0140521 Lupinus albus HOM05D000912 ORTHO05D001232 8.0e-12 73.9 96 41.7
Manes.14G000700 Manihot esculenta HOM05D000912 ORTHO05D001232 1.0e-11 73.6 111 45.0
Manes.14G000600 Manihot esculenta HOM05D000912 ORTHO05D001232 3.0e-11 72.0 111 45.9
Sabra14G0003100 Salix brachista HOM05D000912 ORTHO05D001232 5.2e-11 71.2 104 44.2
Actinidia21902 Actinidia chinensis HOM05D000912 ORTHO05D001232 6.8e-11 70.9 102 40.2
Medtr7g105680 Medicago truncatula HOM05D023663 ORTHO05D011835 1.5e-10 69.7 106 37.7
Actinidia38823 Actinidia chinensis HOM05D000912 ORTHO05D001232 3.4e-10 68.6 108 40.7
ATR1125G026 Amborella trichopoda HOM05D000912 ORTHO05D001232 5.7e-10 67.8 108 42.6
CSS0005184 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 7.5e-10 67.4 108 39.8
GSVIVG01029441001 Vitis vinifera HOM05D000912 ORTHO05D011835 7.5e-10 67.4 98 42.9
Cfa002158 Carpinus fangiana HOM05D000912 ORTHO05D001232 9.8e-10 67.0 113 44.2
FAN05G3420 Fragaria x ananassa HOM05D000912 ORTHO05D001232 9.8e-10 67.0 108 44.4
RcHm_v2.0_Chr2g0148331 Rosa chinensis HOM05D000912 ORTHO05D001232 9.8e-10 67.0 108 41.7
Sc23g0006050 Simmondsia chinensis HOM05D000912 ORTHO05D001232 9.8e-10 67.0 108 42.6
TWI12G0824 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 9.8e-10 67.0 115 40.0
FvH4_6g36320 Fragaria vesca HOM05D000912 ORTHO05D001232 1.7e-09 66.2 108 43.5
FAN02G2903 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.7e-09 66.2 108 43.5
TPR.G38732 Trifolium pratense HOM05D000912 ORTHO05D001232 1.7e-09 66.2 108 38.9
TWI18G1361 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 1.7e-09 66.2 112 42.0
Dinv37769 Davidia involucrata HOM05D000912 ORTHO05D001232 2.2e-09 65.9 108 39.8
TAR626G1203 Trochodendron aralioides HOM05D000912 ORTHO05D001232 2.2e-09 65.9 108 40.7
Medtr4g005050 Medicago truncatula HOM05D000912 ORTHO05D001232 2.8e-09 65.5 93 40.9
FAN14G0321 Fragaria x ananassa HOM05D000912 ORTHO05D001232 4.9e-09 64.7 108 42.6
FAN14G4043 Fragaria x ananassa HOM05D000912 ORTHO05D001232 4.9e-09 64.7 108 42.6
Atru.chr3.4082 Acer truncatum HOM05D000912 ORTHO05D001232 8.3e-09 63.9 116 40.5
Dinv20312 Davidia involucrata HOM05D000912 ORTHO05D001232 1.1e-08 63.5 108 38.9
Actinidia31119 Actinidia chinensis HOM05D000912 ORTHO05D001232 1.4e-08 63.2 108 38.9
FAN09G3798 Fragaria x ananassa HOM05D000912 ORTHO05D001232 1.4e-08 63.2 108 43.5
Phvul.005G082300 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 1.4e-08 63.2 105 40.0
CsaV3_3G000040 Cucumis sativus L. HOM05D000912 ORTHO05D001232 1.8e-08 62.8 60 56.7
CiPaw.02G050600 Carya illinoinensis HOM05D000912 ORTHO05D001232 2.4e-08 62.4 107 41.1
CAN.G880.12 Capsicum annuum HOM05D000912 ORTHO05D001232 3.1e-08 62.0 97 42.3
Sed0017344 Sechium edule HOM05D000912 ORTHO05D001232 3.1e-08 62.0 64 51.6
TWI75G1589 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 3.1e-08 62.0 111 39.6
TAR383G0774 Trochodendron aralioides HOM05D000912 ORTHO05D011835 3.1e-08 62.0 102 37.3
Hma1.2p1_0960F.1_g241630 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 4.1e-08 61.6 102 38.2
Rhsim03G0000100 Rhododendron simsii HOM05D000912 ORTHO05D001232 4.1e-08 61.6 108 38.9
MELO3C013698.2 Cucumis melo HOM05D000912 ORTHO05D001232 7.0e-08 60.8 58 56.9
Nitab4.5_0010895g0020 Nicotiana tabacum HOM05D000912 ORTHO05D001232 7.0e-08 60.8 102 37.3
vmacro21728 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 7.0e-08 60.8 109 38.5
AUR62025681 Chenopodium quinoa HOM05D000912 ORTHO05D001232 9.2e-08 60.5 102 39.2
Duzib192G0163 Durio zibethinus HOM05D000912 ORTHO05D001232 1.2e-07 60.1 119 39.5
QL05p085111 Quercus lobata HOM05D000912 ORTHO05D001232 1.2e-07 60.1 62 53.2
BraA02t07249Z Brassica rapa HOM05D000912 ORTHO05D001232 1.6e-07 59.7 106 43.4
Solyc04g008610.3 Solanum lycopersicum HOM05D000912 ORTHO05D001232 1.6e-07 59.7 103 35.9
CiPaw.02G051600 Carya illinoinensis HOM05D000912 ORTHO05D001232 2.0e-07 59.3 105 41.9
AUR62001296 Chenopodium quinoa HOM05D000912 ORTHO05D001232 2.0e-07 59.3 102 39.2
Ciclev10027674m.g Citrus clementina HOM05D000912 ORTHO05D001232 2.0e-07 59.3 112 41.1
Medtr7g105660 Medicago truncatula HOM05D000912 ORTHO05D011835 2.0e-07 59.3 105 36.2
TAR636G0354 Trochodendron aralioides HOM05D000912 ORTHO05D001232 2.0e-07 59.3 108 38.9
Solyc01g008120.4 Solanum lycopersicum HOM05D000912 ORTHO05D001232 2.7e-07 58.9 103 38.8
Sopen01g003670 Solanum pennellii HOM05D000912 ORTHO05D001232 2.7e-07 58.9 103 38.8
SGA_v2.0_scaffold73G24406 Striga asiatica HOM05D000912 ORTHO05D001232 2.7e-07 58.9 104 39.4
Duzib235G0834 Durio zibethinus HOM05D000912 ORTHO05D001232 3.5e-07 58.5 119 37.0
Peaxi162Scf00097g01412 Petunia axillaris HOM05D000912 ORTHO05D001232 3.5e-07 58.5 105 37.1
Peaxi162Scf00329g00813 Petunia axillaris HOM05D000912 ORTHO05D001232 3.5e-07 58.5 96 39.6
Lsat_1_v5_gn_4_131340 Lactuca sativa HOM05D000912 ORTHO05D001232 4.5e-07 58.2 96 36.5
Nitab4.5_0000129g0360 Nicotiana tabacum HOM05D000912 ORTHO05D001232 4.5e-07 58.2 102 36.3
ClCG10G000030 Citrullus lanatus HOM05D000912 ORTHO05D001232 5.9e-07 57.8 60 53.3
Sed0017205 Sechium edule HOM05D000912 ORTHO05D001232 5.9e-07 57.8 58 53.4
VMungo1080G1388 Vigna mungo HOM05D000912 ORTHO05D001232 5.9e-07 57.8 111 41.4
CSS0008849 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 7.7e-07 57.4 101 38.6
Oeu027255.1 Olea europaea HOM05D000912 ORTHO05D001232 7.7e-07 57.4 105 35.2
SGA_v2.0_scaffold49G18366 Striga asiatica HOM05D000912 ORTHO05D001232 7.7e-07 57.4 99 40.4
ATR0598G184 Amborella trichopoda HOM05D000912 ORTHO05D001232 1.0e-06 57.0 102 38.2
EL10Ac7g18098 Beta vulgaris HOM05D000912 ORTHO05D001232 1.0e-06 57.0 102 36.3
ECA247G1226 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.0e-06 57.0 96 40.6
MBI16_g40723_MAGBIO Magnolia biondii HOM05D000912 ORTHO05D001232 1.0e-06 57.0 108 38.9
CAN.G282.75 Capsicum annuum HOM05D000912 ORTHO05D001232 1.3e-06 56.6 103 37.9
Gohir.D05G117800 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.3e-06 56.6 117 36.8
Gorai.009G121700 Gossypium raimondii HOM05D000912 ORTHO05D001232 1.3e-06 56.6 117 36.8
MSTRG.6589 Avicennia marina HOM05D000912 ORTHO05D001232 1.7e-06 56.2 97 40.2
Carub.0002s2587 Capsella rubella HOM05D000912 ORTHO05D001232 1.7e-06 56.2 111 36.9
vmacro12581 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 1.7e-06 56.2 109 38.5
BcaB03g13036 Brassica carinata HOM05D000912 ORTHO05D001232 2.3e-06 55.8 106 39.6
Migut.M00129 Erythranthe guttata HOM05D000912 ORTHO05D001232 2.3e-06 55.8 96 37.5
Gohir.A06G182500 Gossypium hirsutum HOM05D000912 ORTHO05D001232 2.3e-06 55.8 113 37.2
THA.LOC104813621 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 2.3e-06 55.8 112 37.5
Cpa.g.sc10.17 Carica papaya HOM05D000912 ORTHO05D001232 2.9e-06 55.5 119 38.7
Gorai.010G222100 Gossypium raimondii HOM05D000912 ORTHO05D001232 2.9e-06 55.5 113 36.3
HanXRQChr09g0266961 Helianthus annuus HOM05D000912 ORTHO05D001232 2.9e-06 55.5 101 33.7
Oeu054518.1 Olea europaea HOM05D000912 ORTHO05D001232 2.9e-06 55.5 102 38.2
A02p22450 Brassica napus HOM05D000912 ORTHO05D001232 3.8e-06 55.1 108 40.7
Thecc.06G049100 Theobroma cacao HOM05D000912 ORTHO05D001232 3.8e-06 55.1 119 38.7
Ah.08g218030 Amaranthus hybridus HOM05D000912 ORTHO05D001232 5.0e-06 54.7 101 32.7
Nn8g41285 Nelumbo nucifera HOM05D000912 ORTHO05D001232 5.0e-06 54.7 108 38.0
Nitab4.5_0003699g0060 Nicotiana tabacum HOM05D000912 ORTHO05D001232 5.0e-06 54.7 102 36.3
Rhsim08G0252700 Rhododendron simsii HOM05D000912 ORTHO05D001232 5.0e-06 54.7 100 33.0
THA.LOC104808111 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 5.0e-06 54.7 112 37.5
THA.LOC104812346 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 5.0e-06 54.7 118 37.3
Aqoxy7G02531 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 6.6e-06 54.3 89 38.2
BcaC07g41460 Brassica carinata HOM05D000912 ORTHO05D001232 6.6e-06 54.3 117 38.5
BolC8t51978H Brassica oleracea HOM05D000912 ORTHO05D001232 6.6e-06 54.3 117 38.5
Glyma.15G000300 Glycine max HOM05D000912 ORTHO05D001232 6.6e-06 54.3 58 50.0
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 6.6e-06 54.3 104 37.5
Gohir.D06G189400 Gossypium hirsutum HOM05D000912 ORTHO05D001232 8.6e-06 53.9 113 35.4
Nitab4.5_0000069g0570 Nicotiana tabacum HOM05D000912 ORTHO05D001232 8.6e-06 53.9 103 35.9


User provided reference genes

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