Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03750 Eucalyptus grandis HOM05D004729 ORTHO05D005451 1.0e-210 736.5 368 100.0
Prupe.1G503900 Prunus persica HOM05D004729 ORTHO05D005451 9.6e-153 543.9 345 75.4
MD15G1356700 Malus domestica HOM05D004729 ORTHO05D005451 4.0e-151 538.5 372 70.4
PGR042G2886 Punica granatum HOM05D004729 ORTHO05D005451 5.2e-151 538.1 367 73.0
GSVIVG01008929001 Vitis vinifera HOM05D004729 ORTHO05D005451 1.2e-150 537.0 328 79.0
MD08G1169900 Malus domestica HOM05D004729 ORTHO05D005451 3.8e-149 531.9 366 70.5
FvH4_2g26260 Fragaria vesca HOM05D004729 ORTHO05D005451 1.4e-148 530.0 343 73.5
Potri.002G087700 Populus trichocarpa HOM05D004729 ORTHO05D005451 4.2e-148 528.5 363 73.3
Manes.02G159900 Manihot esculenta HOM05D004729 ORTHO05D005451 1.2e-147 526.9 327 75.5
Dinv07919 Davidia involucrata HOM05D004729 ORTHO05D005451 1.6e-147 526.6 346 72.8
RcHm_v2.0_Chr6g0294871 Rosa chinensis HOM05D004729 ORTHO05D005451 2.7e-147 525.8 371 70.6
Potri.005G173000 Populus trichocarpa HOM05D004729 ORTHO05D005451 3.5e-147 525.4 330 76.4
Ciclev10001583m.g Citrus clementina HOM05D004729 ORTHO05D005451 7.8e-147 524.2 343 73.5
Thecc.08G118600 Theobroma cacao HOM05D004729 ORTHO05D005451 1.3e-146 523.5 368 71.2
CiPaw.05G227200 Carya illinoinensis HOM05D004729 ORTHO05D005451 6.2e-144 514.6 342 72.8
Duzib116G0142 Durio zibethinus HOM05D004729 ORTHO05D005451 1.1e-143 513.8 329 75.4
arahy.Tifrunner.gnm1.ann1.CLQ5CM Arachis hypogaea HOM05D004729 ORTHO05D005451 1.8e-143 513.1 320 75.6
CSS0005799 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 1.8e-143 513.1 333 74.2
Lalb_Chr23g0270821 Lupinus albus HOM05D004729 ORTHO05D005451 4.0e-143 511.9 339 70.2
Psat5g133600 Pisum sativum HOM05D004729 ORTHO05D005451 4.0e-143 511.9 323 74.6
THA.LOC104817066 Tarenaya hassleriana HOM05D004729 ORTHO05D005451 4.0e-143 511.9 350 70.6
TWI56G0049 Tripterygium wilfordii HOM05D004729 ORTHO05D005451 9.0e-143 510.8 366 69.1
Medtr3g073010 Medicago truncatula HOM05D004729 ORTHO05D005451 1.2e-142 510.4 330 73.6
CSS0018062 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 2.0e-142 509.6 338 72.8
Gohir.D05G234700 Gossypium hirsutum HOM05D004729 ORTHO05D005451 2.0e-142 509.6 333 73.3
arahy.Tifrunner.gnm1.ann1.J2YLH9 Arachis hypogaea HOM05D004729 ORTHO05D005451 7.6e-142 507.7 320 75.0
Phvul.009G121400 Phaseolus vulgaris HOM05D004729 ORTHO05D005451 1.7e-141 506.5 334 71.9
TAR151G0002 Trochodendron aralioides HOM05D004729 ORTHO05D005451 2.9e-141 505.8 323 73.4
Lj1g0017363 Lotus japonicus HOM05D004729 ORTHO05D005451 3.8e-141 505.4 335 71.9
CANSAT78G0882 Cannabis sativa HOM05D004729 ORTHO05D005451 4.9e-141 505.0 332 72.6
Cpa.g.sc36.9 Carica papaya HOM05D004729 ORTHO05D005451 6.4e-141 504.6 328 71.0
FAN24G1570 Fragaria x ananassa HOM05D004729 ORTHO05D005451 8.4e-141 504.2 330 72.4
MELO3C012993.2 Cucumis melo HOM05D004729 ORTHO05D005451 1.1e-140 503.8 333 70.6
Gohir.A05G236400 Gossypium hirsutum HOM05D004729 ORTHO05D005451 1.1e-140 503.8 333 72.1
TAR628G0451 Trochodendron aralioides HOM05D004729 ORTHO05D005451 1.4e-140 503.4 349 69.1
VMungo1309G0261 Vigna mungo HOM05D004729 ORTHO05D005451 2.4e-140 502.7 329 72.0
FAN15G1542 Fragaria x ananassa HOM05D004729 ORTHO05D005451 3.2e-140 502.3 321 75.4
CsaV3_3G023700 Cucumis sativus L. HOM05D004729 ORTHO05D005451 9.3e-140 500.7 350 68.6
FAN27G3155 Fragaria x ananassa HOM05D004729 ORTHO05D005451 9.3e-140 500.7 333 73.3
Glyma.04G252900 Glycine max HOM05D004729 ORTHO05D005451 4.6e-139 498.4 348 67.8
Actinidia23053 Actinidia chinensis HOM05D004729 ORTHO05D005451 1.8e-138 496.5 380 66.1
Glyma.06G109600 Glycine max HOM05D004729 ORTHO05D005451 2.5e-137 492.7 348 67.2
Duzib093G1993 Durio zibethinus HOM05D004729 ORTHO05D005451 9.6e-137 490.7 339 71.1
AL1G51210 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 1.8e-135 486.5 359 65.2
Gorai.009G243000 Gossypium raimondii HOM05D004729 ORTHO05D005451 4.0e-135 485.3 324 71.6
Sp1g31520 Schrenkiella parvula HOM05D004729 ORTHO05D005451 2.9e-133 479.2 325 68.6
Cc10_g10550 Coffea canephora HOM05D004729 ORTHO05D005451 4.9e-133 478.4 343 68.5
BcaB05g24351 Brassica carinata HOM05D004729 ORTHO05D005451 6.4e-133 478.0 346 65.0
Carub.0004s0549 Capsella rubella HOM05D004729 ORTHO05D005451 8.4e-133 477.6 327 68.8
A02p14780 Brassica napus HOM05D004729 ORTHO05D005451 1.1e-132 477.2 353 66.3
Carub.0004s0560 Capsella rubella HOM05D004729 ORTHO05D005451 4.2e-132 475.3 325 67.7
Thhalv10027838m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 4.2e-132 475.3 324 68.5
BolC2t08529H Brassica oleracea HOM05D004729 ORTHO05D005451 5.5e-132 474.9 347 66.3
BcaC03g14925 Brassica carinata HOM05D004729 ORTHO05D005451 7.1e-132 474.6 347 66.3
Nn1g08655 Nelumbo nucifera HOM05D004729 ORTHO05D005451 2.1e-131 473.0 350 66.3
AL4G17320 Arabidopsis lyrata HOM05D004729 ORTHO05D005451 2.7e-131 472.6 324 68.2
BraA02t06545Z Brassica rapa HOM05D004729 ORTHO05D005451 2.7e-131 472.6 353 65.7
Haze_00501 Corylus avellana HOM05D004729 ORTHO05D005451 2.7e-131 472.6 382 63.6
CARHR115540 Cardamine hirsuta HOM05D004729 ORTHO05D005451 4.6e-131 471.9 326 67.2
C02p24210 Brassica napus HOM05D004729 ORTHO05D005451 6.0e-131 471.5 352 66.2
Aa31LG7G12040 Aethionema arabicum HOM05D004729 ORTHO05D005451 3.0e-130 469.2 332 66.6
SGA_v2.0_scaffold52G19009 Striga asiatica HOM05D004729 ORTHO05D005451 8.7e-130 467.6 371 64.7
Migut.C01178 Erythranthe guttata HOM05D004729 ORTHO05D005451 1.5e-129 466.8 334 68.6
MSTRG.25403 Avicennia marina HOM05D004729 ORTHO05D005451 2.1e-128 463.0 334 66.8
Sc23g0000860 Simmondsia chinensis HOM05D004729 ORTHO05D005451 3.7e-128 462.2 320 68.1
HanXRQChr06g0181001 Helianthus annuus HOM05D004729 ORTHO05D005451 1.3e-125 453.8 357 62.7
Hund27047 Selenicereus undatus HOM05D004729 ORTHO05D005451 1.7e-125 453.4 359 63.0
Sed0026543 Sechium edule HOM05D004729 ORTHO05D005451 2.9e-125 452.6 394 57.6
DCAR_024544 Daucus carota HOM05D004729 ORTHO05D005451 4.9e-125 451.8 319 67.7
C09p08700 Brassica napus HOM05D004729 ORTHO05D005451 1.4e-124 450.3 327 63.6
DCAR_024606 Daucus carota HOM05D004729 ORTHO05D005451 1.4e-124 450.3 317 68.1
PSO528G0069 Papaver somniferum HOM05D004729 ORTHO05D005451 1.4e-124 450.3 332 65.7
Lsat_1_v5_gn_8_107920 Lactuca sativa HOM05D004729 ORTHO05D005451 7.1e-124 448.0 360 61.9
MBI06_g01065_MAGBIO Magnolia biondii HOM05D004729 ORTHO05D005451 9.3e-124 447.6 317 66.9
PSO170G2478 Papaver somniferum HOM05D004729 ORTHO05D005451 1.2e-123 447.2 372 60.8
Sopen11g008240 Solanum pennellii HOM05D004729 ORTHO05D005451 2.7e-123 446.0 340 63.5
ECA236G4997 Erigeron canadensis HOM05D004729 ORTHO05D005451 7.9e-123 444.5 322 65.2
SalBow7G0963 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.8e-122 443.4 325 65.8
CAN.G321.55 Capsicum annuum HOM05D004729 ORTHO05D005451 5.1e-122 441.8 361 59.8
Solyc11g013200.2 Solanum lycopersicum HOM05D004729 ORTHO05D005451 8.7e-122 441.0 340 62.9
SGA_v2.0_scaffold24G10496 Striga asiatica HOM05D004729 ORTHO05D005451 1.1e-121 440.7 321 66.0
BolC9t53782H Brassica oleracea HOM05D004729 ORTHO05D005451 7.4e-121 438.0 341 60.7
Aqoxy5G04147 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 4.8e-120 435.3 331 64.0
Aqoxy1G01637 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 8.2e-120 434.5 331 63.7
BcaC04g23401 Brassica carinata HOM05D004729 ORTHO05D005451 8.2e-120 434.5 338 60.7
Ah.05g172360 Amaranthus hybridus HOM05D004729 ORTHO05D005451 3.1e-119 432.6 319 65.2
ClCG11G010630 Citrullus lanatus HOM05D004729 ORTHO05D005451 4.1e-119 432.2 361 60.4
Nitab4.5_0000494g0050 Nicotiana tabacum HOM05D004729 ORTHO05D005451 4.5e-118 428.7 328 63.4
CDE08G0072 Ceratophyllum demersum HOM05D004729 ORTHO05D005451 5.9e-118 428.3 349 58.5
Lj4C592G4 Lonicera japonica HOM05D004729 ORTHO05D005451 2.9e-117 426.0 294 71.1
FAN18G3003 Fragaria x ananassa HOM05D004729 ORTHO05D005451 2.5e-116 422.9 318 66.4
Atru.chr13.1337 Acer truncatum HOM05D004729 ORTHO05D005451 5.5e-116 421.8 311 67.2
Atru.chr13.1380 Acer truncatum HOM05D004729 ORTHO05D005451 5.5e-116 421.8 311 67.2
ATR0684G041 Amborella trichopoda HOM05D004729 ORTHO05D005451 7.2e-116 421.4 311 64.0
COL.COLO4_38234 Corchorus olitorius HOM05D004729 ORTHO05D005451 9.4e-116 421.0 292 70.2
CAN.G630.60 Capsicum annuum HOM05D004729 ORTHO05D005451 3.6e-115 419.1 333 61.6
Peaxi162Scf00679g00006 Petunia axillaris HOM05D004729 ORTHO05D005451 1.0e-114 417.5 333 62.8
QL09p035890 Quercus lobata HOM05D004729 ORTHO05D005451 8.8e-114 414.5 604 42.7
Lsat_1_v5_gn_3_63181 Lactuca sativa HOM05D004729 ORTHO05D005451 1.5e-113 413.7 328 61.0
HPP92_002257 Vanilla planifolia HOM05D004729 ORTHO05D005451 9.7e-113 411.0 355 58.3
AUR62023623 Chenopodium quinoa HOM05D004729 ORTHO05D005451 2.4e-111 406.4 270 68.9
AT1G37150 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 6.9e-111 404.8 286 65.4
Oeu017724.4 Olea europaea HOM05D004729 ORTHO05D005451 4.5e-110 402.1 333 60.4
Hma1.2p1_0542F.1_g174920 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 1.3e-109 400.6 265 72.1
unitig_46.g18427 Utricularia gibba HOM05D004729 ORTHO05D005451 1.1e-108 397.5 326 60.7
SHI32261 Sapria himalayana HOM05D004729 ORTHO05D005451 6.1e-107 391.7 319 59.6
Thhalv10004827m.g Eutrema salsugineum HOM05D004729 ORTHO05D005451 6.3e-104 381.7 239 72.0
Os02g0167000 Oryza sativa ssp. japonica HOM05D004729 ORTHO05D005451 2.4e-103 379.8 338 54.1
Zm00001eb232860 Zea mays HOM05D004729 ORTHO05D005451 9.1e-103 377.9 363 53.4
AT2G25710 Arabidopsis thaliana HOM05D004729 ORTHO05D005451 2.0e-102 376.7 306 60.1
Oeu032968.2 Olea europaea HOM05D004729 ORTHO05D005451 7.7e-102 374.8 269 65.1
TPR.G22343 Trifolium pratense HOM05D004729 ORTHO05D005451 1.4e-100 370.5 255 69.0
AUR62029101 Chenopodium quinoa HOM05D004729 ORTHO05D005451 7.2e-100 368.2 325 58.2
Peaxi162Scf00412g00069 Petunia axillaris HOM05D004729 ORTHO05D005451 6.1e-99 365.2 295 61.4
Nitab4.5_0000193g0110 Nicotiana tabacum HOM05D004729 ORTHO05D005451 4.1e-95 352.4 359 51.3
EL10Ac1g00023 Beta vulgaris HOM05D004729 ORTHO05D005451 1.6e-94 350.5 333 53.8
Pp3c9_4090 Physcomitrium patens HOM05D004729 ORTHO05D005451 5.0e-93 345.5 331 51.1
Lj3g0025484 Lotus japonicus HOM05D004729 ORTHO05D005451 2.3e-90 336.7 197 80.2
BcaNung01386 Brassica carinata HOM05D004729 ORTHO05D005451 1.5e-89 334.0 250 60.4
Aa31LG6G9140 Aethionema arabicum HOM05D004729 ORTHO05D005451 1.1e-87 327.8 205 74.1
AagrBONN_evm.TU.Sc2ySwM_117.2782 Anthoceros agrestis HOM05D004729 ORTHO05D005451 9.1e-87 324.7 299 52.2
Mapoly0100s0036 Marchantia polymorpha HOM05D004729 ORTHO05D005451 5.0e-85 318.9 330 46.7
FvH4_5g31361 Fragaria vesca HOM05D004729 ORTHO05D005451 1.5e-81 307.4 176 80.1
Rhsim11G0066000 Rhododendron simsii HOM05D004729 ORTHO05D005451 1.6e-75 287.3 353 46.7
CSS0041333 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 9.8e-73 278.1 209 66.0
SalBow7G1557 Salvia bowleyana HOM05D004729 ORTHO05D005451 1.8e-71 273.9 316 47.2
CBR_g4408 Chara braunii HOM05D004729 ORTHO05D005451 8.6e-69 265.0 292 43.5
Nn5g28096 Nelumbo nucifera HOM05D004729 ORTHO05D005451 1.6e-67 260.8 304 47.7
SMO356G0070 Selaginella moellendorffii HOM05D004729 ORTHO05D005451 1.3e-64 251.1 245 49.8
arahy.Tifrunner.gnm1.ann1.XVDB66 Arachis hypogaea HOM05D004729 ORTHO05D005451 7.5e-57 225.3 139 74.8
PRCOL_00005327 Prasinoderma coloniale HOM05D004729 ORTHO05D005451 1.1e-55 221.5 250 45.6
MCO05G148 Micromonas commoda HOM05D004729 ORTHO05D005451 1.6e-54 217.6 256 43.0
Manes.18G073729 Manihot esculenta HOM05D004729 ORTHO05D005451 7.8e-54 215.3 209 52.2
Nn1g08666 Nelumbo nucifera HOM05D004729 ORTHO05D005451 6.2e-51 205.7 179 58.1
SEGI_13253 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 2.0e-49 200.7 160 58.8
Cre09.g406000 Chlamydomonas reinhardtii HOM05D004729 ORTHO05D005451 1.9e-47 194.1 286 36.4
BraA09t36427Z Brassica rapa HOM05D004729 ORTHO05D005451 3.5e-46 189.9 210 48.6
A09p07790 Brassica napus HOM05D004729 ORTHO05D005451 6.0e-46 189.1 212 48.6
Aqoxy356s001 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 2.6e-41 173.7 129 65.9
Cfa026220 Carpinus fangiana HOM05D004729 ORTHO05D005451 4.9e-40 169.5 368 34.5
SEGI_02892 Sequoiadendron giganteum HOM05D004729 ORTHO05D005451 8.7e-37 158.7 161 47.8
TPR.G675 Trifolium pratense HOM05D004729 ORTHO05D005451 3.8e-32 143.3 79 83.5
FvH4_5g31362 Fragaria vesca HOM05D004729 ORTHO05D005451 7.1e-31 139.0 151 51.7
Lalb_Chr11g0065751 Lupinus albus HOM05D004729 ORTHO05D005451 9.9e-25 118.6 181 39.2
arahy.Tifrunner.gnm1.ann1.M1Z3QL Arachis hypogaea HOM05D004729 ORTHO05D005451 3.8e-24 116.7 120 48.3
Hma1.2p1_0009F.1_g006083 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 2.7e-22 110.5 90 62.2
Hma1.2p1_0009F.1_g006090 Hydrangea macrophylla HOM05D004729 ORTHO05D005451 2.7e-22 110.5 90 62.2
Haze_27035 Corylus avellana HOM05D000050 ORTHO05D005451 6.0e-22 109.4 297 30.0
Dinv27372 Davidia involucrata HOM05D004729 ORTHO05D005451 3.2e-15 87.0 57 71.9
Sabra02G0069200 Salix brachista HOM05D004729 ORTHO05D005451 1.2e-14 85.1 48 81.2
ECA248G3021 Erigeron canadensis HOM05D004729 ORTHO05D005451 1.3e-13 81.6 71 54.9
Aqoxy5G04170 Aquilegia oxysepala HOM05D004729 ORTHO05D005451 1.1e-12 78.6 113 40.7
arahy.Tifrunner.gnm1.ann1.7BX7P6 Arachis hypogaea HOM05D004729 ORTHO05D009789 6.2e-11 72.8 58 56.9
Nn1g08661 Nelumbo nucifera HOM05D004729 ORTHO05D005451 6.5e-08 62.8 43 62.8
CSS0043726 Camellia sinensis var. sinensis HOM05D004729 ORTHO05D005451 4.6e-06 56.6 27 88.9


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