Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 1.7e-99 365.9 179 100.0
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 4.5e-71 271.6 177 78.5
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 4.5e-71 271.6 177 78.5
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 5.8e-71 271.2 179 77.7
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 9.9e-71 270.4 176 77.8
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 9.9e-71 270.4 176 77.8
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 1.3e-70 270.0 176 76.7
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 2.2e-70 269.2 176 77.3
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 2.9e-70 268.9 177 76.3
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 3.8e-70 268.5 177 76.3
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 4.9e-70 268.1 176 77.8
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 8.4e-70 267.3 177 76.3
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 1.4e-69 266.5 176 76.1
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.4e-69 265.8 177 76.8
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 9.3e-69 263.8 179 75.4
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 4.6e-68 261.5 180 77.8
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 6.0e-68 261.2 177 76.3
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 1.0e-67 260.4 177 75.7
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.0e-67 260.4 177 76.3
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 1.8e-67 259.6 177 74.0
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 3.9e-67 258.5 179 76.0
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 6.7e-67 257.7 178 73.6
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 1.9e-66 256.1 177 75.1
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 2.5e-66 255.8 178 74.2
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 5.6e-66 254.6 178 74.7
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 7.4e-66 254.2 181 71.8
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 1.3e-65 253.4 179 73.7
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 1.3e-65 253.4 179 73.7
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 2.8e-65 252.3 185 70.8
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 3.7e-65 251.9 183 72.7
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 8.1e-65 250.8 177 75.1
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 1.1e-64 250.4 178 74.2
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 2.4e-64 249.2 179 74.3
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 3.1e-64 248.8 182 73.6
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 4.0e-64 248.4 179 72.1
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 5.3e-64 248.1 182 70.9
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 5.3e-64 248.1 179 72.6
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 9.0e-64 247.3 177 73.4
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 1.2e-63 246.9 181 70.7
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.5e-63 246.5 156 78.8
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 3.4e-63 245.4 179 76.0
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 3.4e-63 245.4 177 71.2
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 3.4e-63 245.4 183 70.5
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 5.8e-63 244.6 181 70.7
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 7.6e-63 244.2 178 69.1
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 1.0e-62 243.8 153 79.1
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 1.7e-62 243.0 153 77.8
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 2.9e-62 242.3 151 81.5
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 2.9e-62 242.3 155 77.4
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 3.8e-62 241.9 179 73.2
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 4.9e-62 241.5 185 69.7
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 6.5e-62 241.1 177 68.9
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 6.5e-62 241.1 149 79.2
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 6.5e-62 241.1 149 79.2
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 1.1e-61 240.4 182 74.2
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 1.1e-61 240.4 182 74.2
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 1.4e-61 240.0 178 68.5
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 1.4e-61 240.0 180 69.4
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 1.4e-61 240.0 180 69.4
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 1.9e-61 239.6 183 73.8
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 3.2e-61 238.8 149 77.2
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 3.2e-61 238.8 180 69.4
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 3.2e-61 238.8 217 61.8
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 4.2e-61 238.4 153 76.5
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 4.2e-61 238.4 182 73.6
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 4.2e-61 238.4 180 71.7
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 5.5e-61 238.0 181 71.3
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 7.1e-61 237.7 184 69.0
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 9.3e-61 237.3 180 75.0
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 1.2e-60 236.9 178 69.1
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 1.2e-60 236.9 178 69.1
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 1.2e-60 236.9 178 69.1
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 1.6e-60 236.5 181 70.7
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 2.1e-60 236.1 177 68.4
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 7.9e-60 234.2 179 69.8
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 1.3e-59 233.4 182 69.2
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 1.3e-59 233.4 184 67.9
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 1.8e-59 233.0 181 69.6
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 1.8e-59 233.0 179 73.2
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 1.8e-59 233.0 150 77.3
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 3.0e-59 232.3 148 79.1
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 5.1e-59 231.5 189 67.2
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 8.7e-59 230.7 181 69.1
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 1.9e-58 229.6 180 65.0
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 3.3e-58 228.8 179 67.6
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 1.3e-57 226.9 179 67.0
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 1.3e-57 226.9 184 65.8
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.6e-57 226.5 174 69.5
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 2.8e-57 225.7 181 68.0
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 6.2e-57 224.6 150 74.7
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 8.2e-57 224.2 179 68.7
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 1.1e-56 223.8 184 67.9
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 1.4e-56 223.4 289 47.8
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 2.4e-56 222.6 179 66.5
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 3.1e-56 222.2 185 65.9
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 4.0e-56 221.9 183 67.8
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 4.0e-56 221.9 180 67.8
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 4.0e-56 221.9 180 67.2
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.5e-55 219.9 130 81.5
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.0e-55 219.5 289 47.1
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 2.6e-55 219.2 182 67.0
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 4.5e-55 218.4 195 63.1
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 1.3e-54 216.9 152 71.1
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 2.9e-54 215.7 149 75.8
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 8.4e-54 214.2 125 84.0
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 1.1e-53 213.8 152 71.7
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 3.2e-53 212.2 161 68.9
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 3.2e-53 212.2 189 63.5
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 4.2e-53 211.8 189 65.1
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 1.2e-52 210.3 182 63.2
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 1.6e-52 209.9 163 69.9
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 2.1e-52 209.5 154 70.1
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 5.1e-51 204.9 137 74.5
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 2.5e-50 202.6 150 70.0
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 5.7e-50 201.4 179 62.0
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 7.4e-50 201.1 139 73.4
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.1e-48 197.2 178 60.1
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 1.4e-48 196.8 149 67.1
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 3.8e-46 188.7 156 62.2
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 2.5e-45 186.0 147 67.3
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.1e-42 177.2 183 59.6
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 3.1e-40 169.1 122 69.7
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 4.5e-39 165.2 215 51.6
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 5.0e-38 161.8 124 66.9
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 3.2e-37 159.1 125 61.6
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 1.6e-36 156.8 175 54.3
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.4e-34 148.7 87 87.4
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.1e-32 144.1 87 81.6
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 4.1e-32 142.1 82 89.0
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 3.5e-31 139.0 100 63.0
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 3.5e-31 139.0 87 79.3
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 3.8e-30 135.6 81 84.0
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 4.2e-29 132.1 82 80.5
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 2.0e-26 123.2 86 75.6
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 2.8e-25 119.4 91 60.4
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 1.8e-24 116.7 128 48.4
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.9e-21 106.7 69 72.5
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 2.1e-20 103.2 67 70.1
CARHR096330 Cardamine hirsuta HOM05D005249 ORTHO05D006457 8.0e-20 101.3 103 57.3
Nn1g07101 Nelumbo nucifera HOM05D005249 ORTHO05D006457 5.2e-19 98.6 95 54.7
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 3.5e-15 85.9 54 79.6
FAN11G2388 Fragaria x ananassa HOM05D000371 ORTHO05D006340 2.9e-14 82.8 122 47.5
FvH4_3g22200 Fragaria vesca HOM05D000371 ORTHO05D006340 1.5e-13 80.5 122 47.5
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 3.2e-13 79.3 54 77.8
FAN16G2982 Fragaria x ananassa HOM05D000371 ORTHO05D006340 3.6e-12 75.9 96 52.1
RcHm_v2.0_Chr5g0038161 Rosa chinensis HOM05D000371 ORTHO05D006340 5.2e-11 72.0 120 43.3
Hund02097 Selenicereus undatus HOM05D000420 ORTHO05D000110 9.8e-10 67.8 75 54.7
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 2.8e-09 66.2 56 51.8
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 3.5e-07 59.3 36 75.0
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 1.3e-06 57.4 54 50.0


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