Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 4.6e-61 240.0 119 100.0
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 7.1e-38 162.9 119 63.9
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 6.0e-37 159.8 119 63.0
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 6.0e-37 159.8 119 63.0
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 6.0e-37 159.8 119 64.7
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 7.8e-37 159.5 119 63.0
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 2.3e-36 157.9 120 63.3
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.0e-36 157.5 119 62.2
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 8.7e-36 156.0 119 63.0
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.9e-35 154.8 119 61.3
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 3.3e-35 154.1 119 58.0
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 5.6e-35 153.3 119 59.7
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.3e-34 152.1 119 61.3
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 1.3e-34 152.1 119 58.8
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 8.1e-34 149.4 119 58.8
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 1.1e-33 149.1 119 60.5
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 1.1e-33 149.1 119 59.7
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.8e-33 148.3 119 56.3
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.4e-33 147.9 119 57.1
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 3.1e-33 147.5 112 62.5
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 5.3e-33 146.7 121 60.3
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 9.0e-33 146.0 119 58.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 1.2e-32 145.6 119 59.7
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.2e-32 145.6 119 58.8
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 4.4e-32 143.7 119 56.3
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 4.4e-32 143.7 119 56.3
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 7.6e-32 142.9 119 55.5
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 9.9e-32 142.5 119 57.1
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.7e-31 141.7 119 57.1
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 2.2e-31 141.4 119 55.5
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 2.2e-31 141.4 119 55.5
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 3.8e-31 140.6 119 57.1
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 4.9e-31 140.2 119 57.1
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 6.4e-31 139.8 117 54.7
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 6.4e-31 139.8 121 56.2
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 8.4e-31 139.4 120 56.7
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 1.1e-30 139.0 119 54.6
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.1e-30 139.0 117 53.8
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 1.4e-30 138.7 113 58.4
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.4e-30 138.7 119 57.1
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.4e-30 138.7 119 57.1
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 3.2e-30 137.5 119 57.1
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 3.2e-30 137.5 119 57.1
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 3.2e-30 137.5 121 56.2
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 5.4e-30 136.7 131 59.5
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 7.1e-30 136.3 121 54.5
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.2e-29 135.6 113 57.5
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.2e-29 135.6 119 52.1
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.1e-29 134.8 119 55.5
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 4.6e-29 133.7 121 54.5
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 7.9e-29 132.9 121 53.7
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 1.3e-28 132.1 116 58.6
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 1.3e-28 132.1 112 54.5
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.3e-28 132.1 113 56.6
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 2.3e-28 131.3 119 52.1
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 5.1e-28 130.2 115 54.8
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 8.7e-28 129.4 113 54.0
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.9e-27 128.3 113 53.1
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.9e-27 128.3 120 51.7
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 3.3e-27 127.5 122 52.5
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 4.3e-27 127.1 116 51.7
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 6.2e-26 123.2 115 52.2
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 1.1e-25 122.5 124 50.8
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.8e-25 121.7 127 48.8
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 3.1e-25 120.9 127 48.8
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 4.0e-25 120.6 122 52.5
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 6.9e-25 119.8 123 52.0
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 6.9e-25 119.8 127 48.0
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 6.9e-25 119.8 127 48.0
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.2e-24 119.0 125 51.2
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 2.0e-24 118.2 117 47.0
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.0e-24 118.2 126 50.0
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.6e-24 117.9 120 51.7
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 5.8e-24 116.7 122 48.4
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 4.9e-23 113.6 123 50.4
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 1.1e-22 112.5 125 46.4
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 1.1e-22 112.5 119 54.6
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 7.1e-22 109.8 117 49.6
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 9.3e-22 109.4 84 60.7
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.7e-21 107.8 123 47.2
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.3e-20 105.5 117 51.3
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.3e-20 104.8 126 47.6
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 3.9e-20 104.0 132 45.5
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 3.9e-20 104.0 129 47.3
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 5.1e-20 103.6 121 51.2
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 8.7e-20 102.8 70 67.1
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 2.5e-19 101.3 125 45.6
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 9.6e-19 99.4 129 45.0
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 2.1e-18 98.2 129 45.0
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 2.1e-18 98.2 116 48.3
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 2.1e-18 98.2 116 48.3
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 4.8e-18 97.1 133 44.4
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 1.1e-17 95.9 119 47.1
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.4e-17 94.7 98 51.0
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 2.4e-17 94.7 123 43.9
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 3.1e-17 94.4 98 51.0
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.1e-17 94.4 70 58.6
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 1.2e-13 82.4 104 43.3
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 4.6e-13 80.5 114 43.9
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 1.0e-12 79.3 96 46.9
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.1e-10 71.6 84 38.1
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 2.8e-10 71.2 114 31.6
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 1.5e-08 65.5 42 61.9


User provided reference genes

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