Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 2.8e-174 616.3 460 100.0
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 2.8e-102 377.1 439 72.9
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 1.3e-99 368.2 456 71.1
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 4.2e-98 363.2 438 71.7
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 1.2e-97 361.7 434 71.2
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 1.6e-97 361.3 449 71.0
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 7.9e-97 359.0 437 72.8
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 2.3e-96 357.5 438 70.8
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 5.1e-96 356.3 453 69.8
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 6.7e-96 355.9 453 70.0
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 4.4e-95 353.2 440 72.5
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 4.4e-95 353.2 438 70.5
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 7.4e-95 352.4 427 73.8
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 9.7e-95 352.1 441 71.2
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.3e-94 351.7 437 70.9
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 2.2e-94 350.9 434 73.0
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 3.7e-94 350.1 438 72.4
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 4.8e-94 349.7 438 69.9
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 4.8e-94 349.7 412 75.0
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 6.3e-94 349.4 451 72.7
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 6.3e-94 349.4 457 70.9
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 1.1e-93 348.6 438 72.6
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.4e-93 348.2 438 72.1
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 1.8e-93 347.8 425 65.2
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 5.3e-93 346.3 438 72.1
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 5.3e-93 346.3 441 70.3
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 7.0e-93 345.9 438 70.3
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 9.1e-93 345.5 434 72.6
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 1.6e-92 344.7 438 71.2
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 2.6e-92 344.0 455 69.9
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 1.3e-91 341.7 438 71.0
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 1.3e-91 341.7 438 71.0
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 1.7e-91 341.3 438 71.9
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 2.9e-91 340.5 428 71.3
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 3.8e-91 340.1 439 71.3
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 3.8e-91 340.1 440 68.2
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.5e-90 338.2 437 71.2
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 2.5e-90 337.4 437 69.8
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 3.2e-90 337.0 442 70.4
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 1.6e-89 334.7 460 68.7
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 6.1e-89 332.8 423 73.5
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 1.0e-88 332.0 446 69.1
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 2.0e-87 327.8 457 66.7
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 3.3e-87 327.0 435 52.0
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 4.4e-87 326.6 406 73.2
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 5.7e-87 326.2 422 73.0
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 2.2e-86 324.3 438 71.2
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 8.2e-86 322.4 441 68.0
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 2.0e-84 317.8 460 69.6
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 3.5e-84 317.0 442 67.2
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 4.5e-84 316.6 455 67.0
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 4.5e-84 316.6 443 66.6
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 5.9e-84 316.2 460 69.1
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 5.0e-83 313.2 415 71.1
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 6.5e-83 312.8 443 66.4
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 6.5e-83 312.8 443 66.4
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.1e-82 312.0 453 67.5
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 2.5e-82 310.8 453 68.0
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 3.2e-82 310.5 414 71.7
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 3.2e-82 310.5 441 66.9
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 7.2e-82 309.3 405 71.6
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 9.4e-82 308.9 421 71.3
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 9.4e-82 308.9 422 70.1
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 9.4e-82 308.9 441 68.3
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 1.2e-81 308.5 438 66.9
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 8.0e-81 305.8 459 66.4
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.3e-80 304.3 442 67.4
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 4.0e-80 303.5 438 68.7
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 8.8e-80 302.4 442 67.4
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 3.4e-79 300.4 404 73.3
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 4.4e-79 300.1 461 65.3
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 7.5e-79 299.3 442 67.0
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.3e-78 298.5 447 63.3
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 3.7e-78 297.0 441 67.1
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.8e-78 296.6 438 68.0
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.1e-77 293.5 438 67.6
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 4.7e-73 280.0 437 63.4
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 6.1e-73 279.6 459 63.0
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 5.2e-72 276.6 447 64.4
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 2.0e-71 274.6 437 64.8
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 6.3e-70 269.6 413 66.8
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 5.4e-69 266.5 523 47.0
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 4.5e-68 263.5 437 47.8
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.5e-66 258.5 238 59.2
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 8.0e-65 252.7 395 63.8
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 6.4e-62 243.0 437 60.6
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 3.5e-60 237.3 437 60.9
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 8.3e-54 216.1 195 57.4
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.2e-52 212.2 229 51.1
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 3.6e-41 174.1 415 58.6
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 1.3e-35 155.6 268 79.5
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 3.9e-35 154.1 132 56.8
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 3.3e-34 151.0 96 74.0
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 8.1e-33 146.4 96 72.9
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.4e-32 144.8 96 67.7
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 1.2e-31 142.5 96 67.7
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 1.9e-29 135.2 95 67.4
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 1.0e-27 129.4 96 63.5
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 1.6e-25 122.1 424 51.7
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 8.1e-25 119.8 74 74.3
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 8.1e-25 119.8 211 38.4
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 6.9e-24 116.7 73 72.6
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 6.4e-22 110.2 68 73.5
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 6.7e-19 100.1 155 41.3
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 1.2e-15 89.4 117 41.9


User provided reference genes

Program Settings