Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 0.0e+00 1104.4 721 100.0
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 3.9e-198 695.7 537 69.8
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 1.4e-195 687.2 733 66.8
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 4.0e-195 685.6 738 67.6
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 2.4e-192 676.4 537 69.8
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 1.2e-191 674.1 733 62.3
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 2.0e-191 673.3 537 68.2
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 4.6e-191 672.2 534 68.0
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 6.0e-191 671.8 732 62.6
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 1.0e-190 671.0 537 68.7
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 3.9e-190 669.1 727 62.6
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 5.0e-190 668.7 537 68.2
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 2.5e-189 666.4 732 57.8
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 5.6e-189 665.2 727 61.8
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 1.6e-188 663.7 727 61.5
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 2.8e-188 662.9 530 68.5
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 4.7e-188 662.1 727 60.1
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 4.7e-188 662.1 537 68.2
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.8e-187 660.2 537 68.0
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 2.3e-187 659.8 531 67.8
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 4.0e-187 659.1 530 68.3
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 4.4e-186 655.6 535 64.3
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 4.4e-186 655.6 729 60.8
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 8.3e-185 651.4 727 61.6
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 2.4e-184 649.8 532 65.0
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 6.0e-183 645.2 728 59.5
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 1.3e-182 644.0 521 67.6
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 3.0e-182 642.9 536 65.7
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 5.1e-182 642.1 534 66.5
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 1.2e-180 637.5 524 66.0
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 1.2e-180 637.5 520 66.5
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 1.6e-180 637.1 540 68.0
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 1.6e-180 637.1 526 66.3
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 1.1e-179 634.4 726 64.5
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 1.8e-179 633.6 528 65.3
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 4.4e-178 629.0 522 66.7
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 7.6e-178 628.2 455 71.4
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.7e-177 627.1 519 64.2
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 2.2e-177 626.7 534 67.0
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 3.7e-177 625.9 534 66.9
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 3.7e-177 625.9 735 63.3
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 1.1e-176 624.4 524 65.8
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 9.2e-176 621.3 722 67.0
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 1.2e-175 620.9 458 71.0
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 1.6e-175 620.5 746 61.8
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.7e-175 619.8 486 68.5
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 4.6e-175 619.0 757 60.2
Manes.04G134200 Manihot esculenta HOM05D005013 ORTHO05D006005 2.3e-174 616.7 724 62.7
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 5.1e-174 615.5 523 65.6
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 6.6e-174 615.1 456 69.7
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 1.5e-173 614.0 457 69.6
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 1.9e-173 613.6 540 63.9
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 4.0e-171 605.9 506 66.4
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 7.6e-170 601.7 541 64.1
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 1.3e-169 600.9 517 65.6
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 1.3e-169 600.9 425 71.5
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 1.4e-168 597.4 526 63.1
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 2.1e-167 593.6 725 63.7
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 4.6e-167 592.4 743 59.2
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 2.3e-166 590.1 724 63.5
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 5.1e-166 589.0 410 72.4
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 5.6e-165 585.5 587 59.6
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 7.3e-165 585.1 446 67.7
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 8.1e-164 581.6 529 61.8
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 3.1e-163 579.7 442 67.9
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 2.0e-162 577.0 521 62.6
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 9.9e-162 574.7 550 60.9
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 1.3e-161 574.3 492 65.4
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 6.4e-161 572.0 532 61.1
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 3.2e-160 569.7 457 67.4
Rhsim08G0227500 Rhododendron simsii HOM05D005013 ORTHO05D006005 3.5e-159 566.2 504 64.1
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 1.7e-158 563.9 426 67.8
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 3.0e-158 563.1 450 66.2
HanXRQChr02g0032251 Helianthus annuus HOM05D005013 ORTHO05D006005 6.6e-158 562.0 506 63.0
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 1.1e-157 561.2 526 61.0
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 4.3e-157 559.3 530 59.1
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 4.3e-157 559.3 497 64.2
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 6.2e-156 555.4 542 59.4
AT1G79730 Arabidopsis thaliana HOM05D005013 ORTHO05D006005 2.4e-155 553.5 444 65.8
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 1.2e-154 551.2 542 58.7
Lj9C512T10 Lonicera japonica HOM05D005013 ORTHO05D006005 3.4e-154 549.7 559 58.5
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 1.4e-152 544.3 523 58.3
Nitab4.5_0006902g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 2.4e-152 543.5 455 63.5
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 3.2e-152 543.1 486 62.1
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 2.7e-151 540.0 454 64.5
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 1.8e-150 537.3 484 62.4
ECA247G2560 Erigeron canadensis HOM05D005013 ORTHO05D006005 3.0e-150 536.6 510 59.4
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 7.4e-149 531.9 725 52.6
TAR623G0538 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.3e-148 531.2 396 68.7
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 6.2e-148 528.9 499 56.5
A10p33120 Brassica napus HOM05D005013 ORTHO05D006005 8.1e-148 528.5 446 61.2
BcaC06g31994 Brassica carinata HOM05D005013 ORTHO05D006005 9.0e-147 525.0 423 63.6
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 1.2e-146 524.6 734 60.1
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 1.3e-145 521.2 485 57.5
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 1.1e-144 518.1 730 57.9
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 1.1e-144 518.1 462 62.1
BolC9t60139H Brassica oleracea HOM05D005013 ORTHO05D006005 1.3e-142 511.1 469 58.4
C09p74080 Brassica napus HOM05D005013 ORTHO05D006005 1.1e-141 508.1 399 64.4
Lsat_1_v5_gn_4_97461 Lactuca sativa HOM05D005013 ORTHO05D006005 1.9e-141 507.3 441 63.0
Dinv30436 Davidia involucrata HOM05D005013 ORTHO05D006005 9.6e-141 505.0 597 63.7
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 3.7e-140 503.1 508 56.5
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 4.5e-138 496.1 447 59.7
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.1e-136 491.5 509 57.0
AL2G41830 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 3.6e-135 486.5 520 57.9
HanXRQChr09g0276241 Helianthus annuus HOM05D005013 ORTHO05D006005 1.3e-134 484.6 534 53.0
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 4.3e-133 479.6 543 53.0
Os08g0157100 Oryza sativa ssp. japonica HOM05D005013 ORTHO05D006005 1.8e-131 474.2 462 56.7
CAN.G1143.12 Capsicum annuum HOM05D005013 ORTHO05D006005 8.8e-126 455.3 481 54.7
Zm00001eb415930 Zea mays HOM05D005013 ORTHO05D006005 4.4e-125 453.0 429 58.0
Migut.D00991 Erythranthe guttata HOM05D005013 ORTHO05D006005 6.3e-124 449.1 391 62.4
Sc15g0001880 Simmondsia chinensis HOM05D005013 ORTHO05D006005 6.3e-116 422.5 570 60.5
Zm00001eb172540 Zea mays HOM05D005013 ORTHO05D006005 1.1e-115 421.8 329 64.4
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 2.0e-114 417.5 446 53.1
BcaNung02135 Brassica carinata HOM05D005013 ORTHO05D006005 9.1e-107 392.1 360 57.8
Mapoly0123s0029 Marchantia polymorpha HOM05D005013 ORTHO05D006005 5.9e-106 389.4 385 54.3
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis HOM05D005013 ORTHO05D006005 1.1e-104 385.2 359 56.8
SMO116G0383 Selaginella moellendorffii HOM05D005013 ORTHO05D006005 7.2e-104 382.5 360 56.1
Pp3c1_7460 Physcomitrium patens HOM05D005013 ORTHO05D006005 9.8e-101 372.1 442 48.2
Actinidia21716 Actinidia chinensis HOM05D005013 ORTHO05D006005 2.8e-100 370.5 354 59.0
TAR369G0672 Trochodendron aralioides HOM05D005013 ORTHO05D006005 8.8e-94 349.0 444 47.7
AL2G41840 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 2.8e-92 344.0 213 79.3
Cpa.g.sc109.1 Carica papaya HOM05D005013 ORTHO05D006005 1.7e-89 334.7 463 68.9
HPP92_015196 Vanilla planifolia HOM05D005013 ORTHO05D006005 4.3e-88 330.1 308 61.7
SHI11095 Sapria himalayana HOM05D005013 ORTHO05D006005 7.0e-83 312.8 458 44.3
CBR_g8033 Chara braunii HOM05D005013 ORTHO05D006005 6.0e-74 283.1 373 45.3
Ah.01g022080 Amaranthus hybridus HOM05D005013 ORTHO05D006005 5.6e-72 276.6 495 41.0
BraA10t45345Z Brassica rapa HOM05D005013 ORTHO05D006005 2.1e-71 274.6 196 68.9
Cpa.g.sc109.3 Carica papaya HOM05D005013 ORTHO05D006005 5.8e-69 266.5 213 65.7
CDE06G0689 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 2.5e-64 251.1 401 41.1
HPP92_015185 Vanilla planifolia HOM05D005013 ORTHO05D006005 8.4e-44 183.0 201 55.2
Lj5C53T3 Lonicera japonica HOM05D005013 ORTHO05D006005 1.6e-42 178.7 203 49.3
Migut.I00890 Erythranthe guttata HOM05D005013 ORTHO05D006005 5.6e-40 170.2 505 29.7
CARHR074670 Cardamine hirsuta HOM05D005013 ORTHO05D006005 1.3e-36 159.1 105 70.5
Oeu023599.1 Olea europaea HOM05D005013 ORTHO05D006005 1.3e-31 142.5 173 49.7
Psat4g155920 Pisum sativum HOM05D001854 ORTHO05D001800 6.2e-31 140.2 122 59.0
Psat4g155880 Pisum sativum HOM05D001854 ORTHO05D001800 1.4e-30 139.0 122 58.2
Cre12.g520250 Chlamydomonas reinhardtii HOM05D005013 ORTHO05D006005 7.1e-27 126.7 237 37.1
Lsat_1_v5_gn_6_46660 Lactuca sativa HOM05D005013 ORTHO05D006005 9.3e-27 126.3 95 65.3
MCO01G084 Micromonas commoda HOM05D005013 ORTHO05D006005 7.4e-24 116.7 358 30.2
CAN.G907.1 Capsicum annuum HOM05D005013 ORTHO05D006005 3.4e-21 107.8 87 62.1
Nn2g13410 Nelumbo nucifera HOM05D005013 ORTHO05D006005 3.2e-19 101.3 119 54.6
TAR560G0009 Trochodendron aralioides HOM05D005013 ORTHO05D006005 2.3e-17 95.1 146 60.3
AL2G25330 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 4.8e-15 87.4 143 44.1
Oeu023601.1 Olea europaea HOM05D005013 ORTHO05D006005 9.1e-14 83.2 331 46.2
Oeu026780.1 Olea europaea HOM05D005013 ORTHO05D006005 1.7e-12 79.0 56 67.9
Lsat_1_v5_gn_1_14160 Lactuca sativa HOM05D005013 ORTHO05D006005 2.9e-12 78.2 106 45.3
CBR_g48652 Chara braunii HOM05D005013 ORTHO05D006005 6.5e-12 77.0 161 33.5
vmacro04324 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 1.5e-08 65.9 125 39.2
CAN.G1143.11 Capsicum annuum HOM05D005013 ORTHO05D115532 2.0e-08 65.5 44 68.2
Lsat_1_v5_gn_5_133740 Lactuca sativa HOM05D000912 ORTHO05D021086 3.7e-07 61.2 43 69.8
CAN.G1143.9 Capsicum annuum HOM05D000602 ORTHO05D001147 4.1e-06 57.8 80 38.8


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