Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F02827 Eucalyptus grandis HOM05D007847 ORTHO05D009946 1.5e-149 532.7 250 100.0
CiPaw.08G148900 Carya illinoinensis HOM05D007847 ORTHO05D009946 5.6e-80 301.6 288 50.7
Cc07_g07550 Coffea canephora HOM05D007847 ORTHO05D009946 1.3e-79 300.4 284 50.0
PGR102G2702 Punica granatum HOM05D007847 ORTHO05D009946 4.8e-79 298.5 288 49.0
QL06p038286 Quercus lobata HOM05D007847 ORTHO05D009946 3.1e-78 295.8 287 49.5
Dinv26974 Davidia involucrata HOM05D007847 ORTHO05D009946 4.5e-77 292.0 293 49.5
TAR381G1308 Trochodendron aralioides HOM05D007847 ORTHO05D009946 4.5e-77 292.0 292 49.7
Haze_03966 Corylus avellana HOM05D007847 ORTHO05D009946 1.7e-76 290.0 291 49.5
Manes.13G107200 Manihot esculenta HOM05D007847 ORTHO05D009946 1.7e-76 290.0 292 50.0
MD02G1192700 Malus domestica HOM05D007847 ORTHO05D009946 2.2e-76 289.7 298 48.0
Actinidia11949 Actinidia chinensis HOM05D007847 ORTHO05D009946 1.4e-75 287.0 286 50.0
RcHm_v2.0_Chr2g0109231 Rosa chinensis HOM05D007847 ORTHO05D009946 2.4e-75 286.2 292 49.3
CSS0006637 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 4.2e-75 285.4 284 50.7
AL8G43460 Arabidopsis lyrata HOM05D007847 ORTHO05D009946 7.1e-75 284.6 293 48.5
CSS0008963 Camellia sinensis var. sinensis HOM05D007847 ORTHO05D009946 1.2e-74 283.9 284 50.4
TWI77G0524 Tripterygium wilfordii HOM05D007847 ORTHO05D009946 1.0e-73 280.8 288 47.9
Nn5g30695 Nelumbo nucifera HOM05D007847 ORTHO05D009946 3.0e-73 279.3 283 46.3
Gohir.A02G148500 Gossypium hirsutum HOM05D007847 ORTHO05D009946 5.1e-73 278.5 264 50.4
FvH4_1g18540 Fragaria vesca HOM05D007847 ORTHO05D009946 5.6e-72 275.0 292 47.9
Ciclev10026132m.g Citrus clementina HOM05D007847 ORTHO05D009946 1.3e-71 273.9 288 47.6
Thhalv10004606m.g Eutrema salsugineum HOM05D007847 ORTHO05D009946 2.1e-71 273.1 294 47.3
BraA06t26189Z Brassica rapa HOM05D007847 ORTHO05D009946 3.6e-71 272.3 285 49.1
Sopen03g007680 Solanum pennellii HOM05D007847 ORTHO05D009946 3.6e-71 272.3 290 45.9
FAN19G2742 Fragaria x ananassa HOM05D007847 ORTHO05D009946 4.8e-71 271.9 294 48.0
CANSAT01G1865 Cannabis sativa HOM05D007847 ORTHO05D009946 8.1e-71 271.2 287 46.3
Aqoxy6G02972 Aquilegia oxysepala HOM05D007847 ORTHO05D009946 1.1e-70 270.8 285 47.0
C03p59920 Brassica napus HOM05D007847 ORTHO05D009946 1.4e-70 270.4 296 47.0
BolC3t18257H Brassica oleracea HOM05D007847 ORTHO05D009946 1.4e-70 270.4 296 47.0
Carub.0008s2664 Capsella rubella HOM05D007847 ORTHO05D009946 1.4e-70 270.4 298 47.7
Duzib264G0083 Durio zibethinus HOM05D007847 ORTHO05D009946 1.4e-70 270.4 284 47.9
Cfa006792 Carpinus fangiana HOM05D007847 ORTHO05D009946 2.4e-70 269.6 216 55.6
Gohir.D03G032000 Gossypium hirsutum HOM05D007847 ORTHO05D009946 4.0e-70 268.9 285 47.0
THA.LOC104819277 Tarenaya hassleriana HOM05D007847 ORTHO05D009946 6.9e-70 268.1 300 44.7
FAN28G0215 Fragaria x ananassa HOM05D007847 ORTHO05D009946 9.0e-70 267.7 316 45.3
Gorai.003G033500 Gossypium raimondii HOM05D007847 ORTHO05D009946 9.0e-70 267.7 288 46.5
Lj4C169G8 Lonicera japonica HOM05D007847 ORTHO05D009946 9.0e-70 267.7 221 58.4
FAN23G2885 Fragaria x ananassa HOM05D007847 ORTHO05D009946 1.5e-69 266.9 300 45.7
Migut.H00314 Erythranthe guttata HOM05D007847 ORTHO05D009946 4.5e-69 265.4 286 44.1
Prupe.6G213700 Prunus persica HOM05D007847 ORTHO05D009946 5.8e-69 265.0 258 51.2
Solyc03g043870.3 Solanum lycopersicum HOM05D007847 ORTHO05D009946 5.8e-69 265.0 284 45.4
A06p32610 Brassica napus HOM05D007847 ORTHO05D009946 1.3e-68 263.8 285 47.7
Thecc.01G078900 Theobroma cacao HOM05D007847 ORTHO05D009946 1.3e-68 263.8 280 47.5
Nitab4.5_0002639g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 2.4e-67 259.6 192 58.9
Zm00001eb215660 Zea mays HOM05D007847 ORTHO05D009946 5.5e-67 258.5 215 52.6
Atru.chr3.1082 Acer truncatum HOM05D007847 ORTHO05D009946 1.2e-66 257.3 218 53.2
PSO541G2530 Papaver somniferum HOM05D007847 ORTHO05D009946 1.0e-65 254.2 284 44.4
Oeu013362.2 Olea europaea HOM05D007847 ORTHO05D009946 3.9e-65 252.3 271 45.4
Peaxi162Scf00118g01311 Petunia axillaris HOM05D007847 ORTHO05D009946 3.9e-65 252.3 213 54.9
Nitab4.5_0005210g0020 Nicotiana tabacum HOM05D007847 ORTHO05D009946 5.1e-65 251.9 276 45.3
Os03g0726900 Oryza sativa ssp. japonica HOM05D007847 ORTHO05D009946 1.5e-64 250.4 215 51.6
MBI16_g08505_MAGBIO Magnolia biondii HOM05D007847 ORTHO05D009946 4.3e-64 248.8 276 45.7
Sabra07G0006500 Salix brachista HOM05D007847 ORTHO05D009946 4.3e-64 248.8 270 44.4
ECA238G4198 Erigeron canadensis HOM05D007847 ORTHO05D009946 2.1e-63 246.5 280 44.3
PSO675G2957 Papaver somniferum HOM05D007847 ORTHO05D009946 2.1e-63 246.5 282 42.9
Potri.007G008300 Populus trichocarpa HOM05D007847 ORTHO05D009946 2.1e-63 246.5 216 51.9
HanXRQChr14g0447671 Helianthus annuus HOM05D007847 ORTHO05D009946 2.8e-63 246.1 276 44.2
DCAR_010781 Daucus carota HOM05D007847 ORTHO05D009946 1.2e-61 240.7 267 43.4
AT5G65740 Arabidopsis thaliana HOM05D007847 ORTHO05D009946 1.5e-61 240.4 212 53.3
FAN26G2270 Fragaria x ananassa HOM05D007847 ORTHO05D009946 3.4e-61 239.2 311 43.1
BcaC01g02838 Brassica carinata HOM05D007847 ORTHO05D009946 2.9e-60 236.1 292 43.5
Sc22g0002130 Simmondsia chinensis HOM05D007847 ORTHO05D009946 2.5e-59 233.0 284 43.3
ATR0629G045 Amborella trichopoda HOM05D007847 ORTHO05D009946 1.9e-56 223.4 306 38.6
CARHR279740 Cardamine hirsuta HOM05D007847 ORTHO05D009946 7.2e-51 204.9 197 50.8
COL.COLO4_11640 Corchorus olitorius HOM05D007847 ORTHO05D009946 3.3e-48 196.1 265 40.8
SEGI_26913 Sequoiadendron giganteum HOM05D007847 ORTHO05D009946 7.4e-48 194.9 293 34.5
PGSC0003DMG400017101 Solanum tuberosum HOM05D007847 ORTHO05D009946 4.1e-46 189.1 229 41.9
Pp3c23_15090 Physcomitrium patens HOM05D007847 ORTHO05D009946 9.4e-43 177.9 271 32.1
Mapoly0084s0053 Marchantia polymorpha HOM05D007847 ORTHO05D009946 1.7e-39 167.2 199 37.7
SGA_v2.0_scaffold121G33081 Striga asiatica HOM05D007847 ORTHO05D009946 6.3e-39 165.2 218 39.0
AagrBONN_evm.TU.Sc2ySwM_362.720 Anthoceros agrestis HOM05D007847 ORTHO05D009946 1.1e-38 164.5 230 36.5
MSTRG.2798 Avicennia marina HOM05D007847 ORTHO05D009946 3.1e-38 162.9 229 38.4
Cpa.g.sc129.54 Carica papaya HOM05D007847 ORTHO05D009946 6.9e-38 161.8 208 39.9
MD15G1303200 Malus domestica HOM05D007847 ORTHO05D009946 1.1e-35 154.5 109 64.2
CAN.G82.24 Capsicum annuum HOM05D007847 ORTHO05D009946 1.3e-31 141.0 107 57.0
HPP92_003710 Vanilla planifolia HOM05D007847 ORTHO05D009946 2.5e-27 126.7 211 34.6
Sp2g28840 Schrenkiella parvula HOM05D007847 ORTHO05D009946 2.2e-23 113.6 69 68.1
Lsat_1_v5_gn_2_80401 Lactuca sativa HOM05D007847 ORTHO05D009946 1.6e-21 107.5 202 33.2
MD15G1303100 Malus domestica HOM05D007847 ORTHO05D009946 1.7e-20 104.0 124 44.4
CDE02G3555 Ceratophyllum demersum HOM05D007847 ORTHO05D009946 8.0e-18 95.1 65 66.2
Actinidia36408 Actinidia chinensis HOM05D007847 ORTHO05D009946 5.2e-17 92.4 146 35.6
Cre03.g204801 Chlamydomonas reinhardtii HOM05D007847 ORTHO05D009946 5.5e-11 72.4 110 38.2


User provided reference genes

Program Settings