Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01756 Eucalyptus grandis HOM05D005833 ORTHO05D008135 0.0e+00 1176.8 628 100.0
Prupe.2G013700 Prunus persica HOM05D005833 ORTHO05D008135 5.2e-191 671.8 634 56.2
QL02p014018 Quercus lobata HOM05D005833 ORTHO05D008135 1.4e-183 647.1 629 53.4
Dinv31936 Davidia involucrata HOM05D005833 ORTHO05D008135 1.5e-182 643.7 635 59.5
Thecc.08G058300 Theobroma cacao HOM05D005833 ORTHO05D008135 4.9e-181 638.6 626 52.9
MD08G1002500 Malus domestica HOM05D005833 ORTHO05D008135 6.0e-179 631.7 639 53.5
Cpa.g.sc26.202 Carica papaya HOM05D005833 ORTHO05D008135 7.8e-179 631.3 627 54.4
Haze_22762 Corylus avellana HOM05D005833 ORTHO05D008135 7.8e-179 631.3 633 53.7
GSVIVG01008674001 Vitis vinifera HOM05D005833 ORTHO05D008135 2.9e-173 612.8 625 52.5
Gohir.A01G106200 Gossypium hirsutum HOM05D005833 ORTHO05D008135 6.0e-171 605.1 628 51.6
Gorai.002G118000 Gossypium raimondii HOM05D005833 ORTHO05D008135 1.5e-169 600.5 628 57.2
TAR381G0753 Trochodendron aralioides HOM05D005833 ORTHO05D008135 1.4e-167 594.0 679 48.6
Ciclev10004328m.g Citrus clementina HOM05D005833 ORTHO05D008135 1.8e-167 593.6 622 57.2
Rhsim06G0007700 Rhododendron simsii HOM05D005833 ORTHO05D008135 1.2e-166 590.9 635 54.2
TWI38G0766 Tripterygium wilfordii HOM05D005833 ORTHO05D008135 3.7e-165 585.9 627 50.9
vmacro21814 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 3.7e-165 585.9 634 53.2
Sc02g0009090 Simmondsia chinensis HOM05D005833 ORTHO05D008135 4.9e-165 585.5 636 48.3
RcHm_v2.0_Chr6g0270441 Rosa chinensis HOM05D005833 ORTHO05D008135 1.2e-163 580.9 637 49.9
Actinidia15488 Actinidia chinensis HOM05D005833 ORTHO05D008135 3.5e-163 579.3 627 49.0
CiPaw.12G008600 Carya illinoinensis HOM05D005833 ORTHO05D008135 1.0e-162 577.8 590 54.9
Actinidia17037 Actinidia chinensis HOM05D005833 ORTHO05D008135 2.3e-162 576.6 630 49.0
CSS0049151 Camellia sinensis var. sinensis HOM05D005833 ORTHO05D008135 3.0e-162 576.2 627 52.8
Nitab4.5_0000588g0140 Nicotiana tabacum HOM05D005833 ORTHO05D008135 2.4e-159 566.6 628 49.5
Nn5g30935 Nelumbo nucifera HOM05D005833 ORTHO05D008135 3.1e-159 566.2 634 50.3
EL10Ac1g01971 Beta vulgaris HOM05D005833 ORTHO05D008135 9.9e-158 561.2 634 52.4
Potri.001G047200 Populus trichocarpa HOM05D005833 ORTHO05D008135 1.7e-157 560.5 669 46.9
PGSC0003DMG400009977 Solanum tuberosum HOM05D005833 ORTHO05D008135 2.9e-157 559.7 627 49.1
BraA07t31715Z Brassica rapa HOM05D005833 ORTHO05D008135 3.8e-157 559.3 624 48.9
AL2G36360 Arabidopsis lyrata HOM05D005833 ORTHO05D008135 4.9e-157 558.9 629 49.4
Sopen04g035940 Solanum pennellii HOM05D005833 ORTHO05D008135 6.4e-157 558.5 626 48.7
C06p50250 Brassica napus HOM05D005833 ORTHO05D008135 8.4e-157 558.1 628 48.4
BolC6t40064H Brassica oleracea HOM05D005833 ORTHO05D008135 8.4e-157 558.1 628 48.4
MELO3C023645.2 Cucumis melo HOM05D005833 ORTHO05D008135 1.4e-156 557.4 639 47.7
Solyc04g082320.3 Solanum lycopersicum HOM05D005833 ORTHO05D008135 2.4e-156 556.6 626 48.7
A07p41850 Brassica napus HOM05D005833 ORTHO05D008135 9.2e-156 554.7 624 48.6
Sp5g31420 Schrenkiella parvula HOM05D005833 ORTHO05D008135 9.2e-156 554.7 625 48.5
Manes.01G079700 Manihot esculenta HOM05D005833 ORTHO05D008135 2.7e-155 553.1 631 54.5
CsaV3_7G024400 Cucumis sativus L. HOM05D005833 ORTHO05D008135 4.6e-155 552.4 634 47.3
Carub.0002s2317 Capsella rubella HOM05D005833 ORTHO05D008135 2.3e-154 550.1 633 48.0
Psat6g000360 Pisum sativum HOM05D005833 ORTHO05D008135 6.6e-154 548.5 636 48.3
Ca_25244_v3 Cicer arietinum L. HOM05D005833 ORTHO05D008135 8.7e-154 548.1 636 46.9
Thhalv10018138m.g Eutrema salsugineum HOM05D005833 ORTHO05D008135 1.1e-153 547.7 630 47.8
CANSAT56G4366 Cannabis sativa HOM05D005833 ORTHO05D008135 2.8e-152 543.1 626 49.5
CAN.G311.113 Capsicum annuum HOM05D005833 ORTHO05D008135 2.8e-152 543.1 627 48.6
Aa31LG4G6370 Aethionema arabicum HOM05D005833 ORTHO05D008135 3.6e-152 542.7 637 48.4
Medtr6g069480 Medicago truncatula HOM05D005833 ORTHO05D008135 3.6e-152 542.7 637 47.3
ClCG09G010280 Citrullus lanatus HOM05D005833 ORTHO05D008135 1.4e-151 540.8 632 46.8
FvH4_2g37510 Fragaria vesca HOM05D005833 ORTHO05D008135 1.4e-151 540.8 637 47.1
THA.LOC104813754 Tarenaya hassleriana HOM05D005833 ORTHO05D008135 1.4e-151 540.8 631 49.8
Hma1.2p1_1100F.1_g257060 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 1.8e-151 540.4 635 54.6
Lalb_Chr19g0131751 Lupinus albus HOM05D005833 ORTHO05D008135 4.4e-150 535.8 634 47.6
VMungo0647G1167 Vigna mungo HOM05D005833 ORTHO05D008135 5.8e-150 535.4 627 47.4
FAN27G2717 Fragaria x ananassa HOM05D005833 ORTHO05D008135 2.2e-149 533.5 639 46.9
TPR.G6767 Trifolium pratense HOM05D005833 ORTHO05D008135 2.2e-149 533.5 634 47.3
FAN20G1756 Fragaria x ananassa HOM05D005833 ORTHO05D008135 1.9e-148 530.4 635 46.9
HanXRQChr14g0428311 Helianthus annuus HOM05D005833 ORTHO05D008135 2.4e-148 530.0 627 45.1
arahy.Tifrunner.gnm1.ann1.5KXZ1H Arachis hypogaea HOM05D005833 ORTHO05D008135 3.2e-148 529.6 631 48.7
arahy.Tifrunner.gnm1.ann1.JP3Y8V Arachis hypogaea HOM05D005833 ORTHO05D008135 3.2e-148 529.6 631 48.7
RcHm_v2.0_Chr6g0304231 Rosa chinensis HOM05D005833 ORTHO05D008135 1.6e-147 527.3 637 46.8
Peaxi162Scf00893g00432 Petunia axillaris HOM05D005833 ORTHO05D008135 6.0e-147 525.4 629 47.9
Sabra01G0032600 Salix brachista HOM05D005833 ORTHO05D008135 1.3e-146 524.2 704 43.9
Lj2g0014489 Lotus japonicus HOM05D005833 ORTHO05D008135 1.7e-146 523.9 650 45.5
Ah.11g041110 Amaranthus hybridus HOM05D005833 ORTHO05D008135 8.7e-146 521.5 634 45.4
Migut.N03019 Erythranthe guttata HOM05D005833 ORTHO05D008135 1.1e-145 521.2 631 53.9
MBI15_g24990_MAGBIO Magnolia biondii HOM05D005833 ORTHO05D008135 6.2e-144 515.4 744 42.3
CARHR069840 Cardamine hirsuta HOM05D005833 ORTHO05D008135 1.8e-143 513.8 607 47.1
AUR62043177 Chenopodium quinoa HOM05D005833 ORTHO05D008135 1.7e-141 507.3 678 42.5
Cc01_g04490 Coffea canephora HOM05D005833 ORTHO05D008135 2.9e-141 506.5 634 51.9
SHI22388 Sapria himalayana HOM05D005833 ORTHO05D008135 4.9e-141 505.8 627 46.1
Lsat_1_v5_gn_2_5021 Lactuca sativa HOM05D005833 ORTHO05D008135 8.4e-141 505.0 639 45.4
Lj8C590T1 Lonicera japonica HOM05D005833 ORTHO05D008135 2.1e-139 500.4 583 54.0
ECA238G3879 Erigeron canadensis HOM05D005833 ORTHO05D008135 2.7e-139 500.0 607 45.3
Glyma.14G223300 Glycine max HOM05D005833 ORTHO05D008135 3.3e-137 493.0 635 49.0
MSTRG.22056 Avicennia marina HOM05D005833 ORTHO05D008135 5.6e-137 492.3 634 51.4
Phvul.001G001200 Phaseolus vulgaris HOM05D005833 ORTHO05D008135 2.1e-136 490.3 614 45.1
FAN15G1206 Fragaria x ananassa HOM05D005833 ORTHO05D008135 9.0e-135 485.0 639 44.1
PGR083G0966 Punica granatum HOM05D005833 ORTHO05D008135 7.6e-134 481.9 627 50.2
SGA_v2.0_scaffold225G43066 Striga asiatica HOM05D005833 ORTHO05D008135 2.1e-131 473.8 633 43.8
Hma1.2p1_1100F.1_g257040 Hydrangea macrophylla HOM05D005833 ORTHO05D008135 2.7e-131 473.4 452 57.1
CDE09G0025 Ceratophyllum demersum HOM05D005833 ORTHO05D008135 1.3e-130 471.1 714 40.1
PSO541G2949 Papaver somniferum HOM05D005833 ORTHO05D008135 7.4e-129 465.3 669 43.9
ATR0691G240 Amborella trichopoda HOM05D005833 ORTHO05D008135 8.2e-128 461.8 710 38.9
HPP92_008490 Vanilla planifolia HOM05D005833 ORTHO05D008135 2.7e-123 446.8 699 40.2
PSO675G2737 Papaver somniferum HOM05D005833 ORTHO05D008135 4.3e-121 439.5 669 46.0
Zm00001eb315840 Zea mays HOM05D005833 ORTHO05D008135 8.2e-120 435.3 636 39.6
BcaNung02801 Brassica carinata HOM05D005833 ORTHO05D008135 1.2e-118 431.4 611 41.9
AT1G76280 Arabidopsis thaliana HOM05D005833 ORTHO05D008135 3.8e-117 426.4 447 53.2
Sed0015348 Sechium edule HOM05D005833 ORTHO05D008135 2.1e-115 420.6 455 50.8
unitig_699.g19597 Utricularia gibba HOM05D005833 ORTHO05D008135 1.8e-114 417.5 614 41.9
Aqoxy6G01299 Aquilegia oxysepala HOM05D005833 ORTHO05D008135 2.0e-113 414.1 677 41.5
BcaC08g47270 Brassica carinata HOM05D005833 ORTHO05D008135 5.7e-113 412.5 502 47.0
Gohir.D01G092700 Gossypium hirsutum HOM05D005833 ORTHO05D008135 3.7e-112 409.8 400 55.5
SEGI_05799 Sequoiadendron giganteum HOM05D005833 ORTHO05D008135 1.4e-103 381.3 658 34.5
DCAR_009531 Daucus carota HOM05D004428 ORTHO05D006381 4.2e-100 369.8 455 46.8
TPR.G8628 Trifolium pratense HOM05D005833 ORTHO05D008135 1.4e-90 338.2 350 51.1
SalBow6G3625 Salvia bowleyana HOM05D005833 ORTHO05D008135 3.0e-90 337.0 399 48.1
AUR62036881 Chenopodium quinoa HOM05D005833 ORTHO05D008135 3.2e-84 317.0 364 47.5
BcaC09g51226 Brassica carinata HOM05D005833 ORTHO05D008135 6.6e-77 292.7 538 36.1
BcaC08g47127 Brassica carinata HOM05D005833 ORTHO05D008135 6.8e-66 256.1 297 49.5
BcaC08g47126 Brassica carinata HOM05D005833 ORTHO05D008135 2.1e-54 218.0 264 44.3
Glyma.14G222150 Glycine max HOM05D005833 ORTHO05D008135 7.8e-54 216.1 208 53.4
COL.COLO4_04005 Corchorus olitorius HOM05D005833 ORTHO05D008135 8.1e-51 206.1 438 33.8
TPR.G8631 Trifolium pratense HOM05D005833 ORTHO05D008135 1.1e-47 195.7 294 41.2
CAN.G643.17 Capsicum annuum HOM05D005833 ORTHO05D008135 9.2e-47 192.6 372 34.4
Lj8P589T22 Lonicera japonica HOM05D005833 ORTHO05D008135 3.4e-41 174.1 161 58.4
Oeu011332.1 Olea europaea HOM05D005833 ORTHO05D008135 2.7e-38 164.5 138 58.7
Oeu011333.1 Olea europaea HOM05D005833 ORTHO05D008135 2.7e-38 164.5 138 58.7
Medtr1g026480 Medicago truncatula HOM05D005833 ORTHO05D008135 4.0e-34 150.6 131 53.4
Nitab4.5_0000198g0010 Nicotiana tabacum HOM05D005833 ORTHO05D008135 4.0e-34 150.6 142 51.4
SMO230G0024 Selaginella moellendorffii HOM05D005833 ORTHO05D008135 7.6e-33 146.4 631 30.0
AagrBONN_evm.TU.Sc2ySwM_117.1478 Anthoceros agrestis HOM05D005833 ORTHO05D008135 9.9e-33 146.0 409 28.4
CBR_g11913 Chara braunii HOM05D005833 ORTHO05D008135 1.5e-28 132.1 271 31.4
BcaC08g47271 Brassica carinata HOM05D005833 ORTHO05D008135 4.5e-25 120.6 114 50.0
DCAR_009530 Daucus carota HOM05D005833 ORTHO05D008135 1.7e-24 118.6 114 48.2
Pp3c11_2930 Physcomitrium patens HOM05D005833 ORTHO05D008135 8.4e-24 116.3 606 28.2
Mapoly0009s0070 Marchantia polymorpha HOM05D005833 ORTHO05D008135 2.1e-22 111.7 470 23.6
Medtr1g026340 Medicago truncatula HOM05D005833 ORTHO05D008135 1.7e-16 92.0 151 39.7
Medtr1g026460 Medicago truncatula HOM05D005833 ORTHO05D008135 1.7e-16 92.0 151 39.7
BcaB05g24986 Brassica carinata HOM05D005833 ORTHO05D008135 1.5e-12 79.0 71 60.6
BcaC09g51225 Brassica carinata HOM05D005833 ORTHO05D008135 3.1e-10 71.2 66 50.0
CAN.G772.6 Capsicum annuum HOM05D005833 ORTHO05D008135 4.2e-07 60.8 73 39.7
AagrBONN_evm.TU.Sc2ySwM_368.2006__2007 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.2e-06 59.3 300 22.0
AagrBONN_evm.TU.Sc2ySwM_228.4557 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.6e-06 57.4 287 20.6
vmacro21815 Vaccinium macrocarpon HOM05D005833 ORTHO05D008135 7.9e-06 56.6 56 50.0


User provided reference genes

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