Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 5.0e-202 707.6 367 100.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 2.4e-132 476.1 356 73.0
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 1.9e-129 466.5 355 70.1
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 7.4e-129 464.5 359 71.0
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 2.8e-128 462.6 360 70.3
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 8.1e-128 461.1 363 69.7
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 1.4e-127 460.3 368 70.7
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 1.8e-127 459.9 353 71.4
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 2.4e-127 459.5 359 70.5
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 1.5e-126 456.8 329 73.3
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 2.0e-126 456.4 327 74.0
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 2.6e-126 456.1 364 65.9
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 9.9e-126 454.1 283 81.6
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 1.7e-125 453.4 368 68.5
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 2.2e-125 453.0 354 68.6
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 2.9e-125 452.6 355 69.0
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 3.8e-125 452.2 344 69.2
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 4.9e-125 451.8 366 67.5
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 4.9e-125 451.8 314 73.6
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 4.9e-125 451.8 358 69.0
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.1e-124 450.7 365 67.1
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 1.4e-124 450.3 370 68.1
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 7.1e-124 448.0 358 66.8
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 1.2e-123 447.2 361 68.1
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 1.2e-123 447.2 351 68.7
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 1.6e-123 446.8 297 76.1
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 2.7e-123 446.0 301 75.4
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 6.0e-123 444.9 365 67.1
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 7.9e-123 444.5 303 76.2
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 2.3e-122 443.0 303 75.6
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 2.5e-121 439.5 351 69.8
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 3.3e-121 439.1 348 69.0
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 3.3e-121 439.1 289 76.1
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 1.3e-120 437.2 308 74.7
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 2.1e-120 436.4 320 71.6
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 2.8e-120 436.0 314 72.3
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 2.8e-120 436.0 314 72.3
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 2.8e-120 436.0 314 72.3
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 2.8e-120 436.0 336 68.8
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 2.8e-120 436.0 351 67.5
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 2.8e-120 436.0 373 63.8
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 3.7e-120 435.6 326 72.1
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 6.2e-120 434.9 339 68.7
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 8.2e-120 434.5 329 70.2
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 8.2e-120 434.5 316 72.2
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 8.2e-120 434.5 322 68.9
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 1.1e-119 434.1 350 66.9
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 3.1e-119 432.6 327 68.8
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 3.1e-119 432.6 352 66.5
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 4.0e-119 432.2 302 72.8
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 4.0e-119 432.2 316 70.3
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 5.3e-119 431.8 314 72.3
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 5.3e-119 431.8 309 71.5
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 5.3e-119 431.8 314 72.9
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 1.2e-118 430.6 338 67.8
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 1.2e-118 430.6 339 67.6
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 1.2e-118 430.6 292 74.0
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 1.2e-118 430.6 361 64.8
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 1.5e-118 430.3 285 76.1
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 1.5e-118 430.3 369 64.5
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 3.4e-118 429.1 350 66.3
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 4.5e-118 428.7 385 63.1
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 7.6e-118 427.9 358 65.9
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 1.3e-117 427.2 338 68.0
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 2.2e-117 426.4 311 68.8
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 2.9e-117 426.0 351 67.0
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 4.9e-117 425.2 401 60.8
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 1.9e-116 423.3 352 65.1
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 7.1e-116 421.4 348 66.1
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 3.0e-114 416.0 395 62.0
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 3.9e-114 415.6 361 66.5
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 1.1e-113 414.1 315 67.9
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 5.7e-113 411.8 335 68.4
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 2.8e-112 409.5 338 67.2
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 3.7e-112 409.1 330 65.8
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 5.3e-111 405.2 308 68.8
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.3e-109 400.6 338 63.6
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 5.0e-109 398.7 265 77.7
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 7.2e-108 394.8 323 66.6
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 9.3e-108 394.4 298 69.5
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 7.9e-107 391.3 281 68.7
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 3.7e-104 382.5 363 63.4
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 1.8e-103 380.2 423 56.3
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 5.3e-103 378.6 365 61.9
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 8.5e-101 371.3 264 68.6
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 1.8e-98 363.6 493 46.0
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 9.7e-97 357.8 308 64.6
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 1.1e-95 354.4 265 72.5
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 4.1e-95 352.4 531 43.1
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 2.0e-94 350.1 286 67.8
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 5.9e-94 348.6 586 41.0
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 3.6e-91 339.3 283 61.5
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 2.3e-90 336.7 230 71.7
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 7.4e-89 331.6 287 61.0
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 1.3e-88 330.9 233 70.4
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 1.2e-86 324.3 284 58.1
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 2.2e-85 320.1 298 56.4
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 5.0e-85 318.9 260 66.9
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 8.5e-85 318.2 253 67.2
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.8e-82 310.5 283 56.5
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 7.7e-78 295.0 378 50.5
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 7.7e-78 295.0 184 79.3
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 2.5e-60 236.9 193 68.4
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 1.7e-56 224.2 318 43.7
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 1.4e-55 221.1 198 56.6
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 4.1e-55 219.5 142 74.6
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 9.2e-55 218.4 197 62.4
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 4.6e-54 216.1 170 63.5
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 1.5e-49 201.1 339 43.7
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 1.5e-49 201.1 193 53.4
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 2.0e-46 190.7 342 38.6
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 7.8e-46 188.7 199 53.3
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 1.1e-34 151.8 210 44.3
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 6.6e-29 132.5 109 61.5
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 1.9e-28 131.0 209 39.2
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 7.3e-28 129.0 98 68.4
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 9.0e-26 122.1 77 76.6
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 1.5e-25 121.3 75 77.3
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 3.5e-22 110.2 91 64.8
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.1e-20 105.1 113 57.5
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 7.6e-17 92.4 54 83.3
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 8.4e-16 89.0 72 59.7
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 3.2e-15 87.0 155 35.5
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 9.3e-15 85.5 108 48.1
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 1.6e-14 84.7 77 59.7
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 58 70.7
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 58 70.7
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 58 70.7
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 58 70.7
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 58 70.7
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.9e-13 80.1 58 70.7
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 1.9e-12 77.8 58 69.0
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 5.6e-12 76.3 58 69.0
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 9.3e-07 58.9 37 73.0


User provided reference genes

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