Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 0.0e+00 1187.9 595 100.0
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.9e-275 952.2 595 78.2
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 6.3e-271 937.2 593 77.7
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.2e-269 932.9 596 76.8
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.0e-268 929.9 593 76.9
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.2e-267 923.7 592 76.2
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 1.1e-264 916.4 596 76.2
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 3.3e-264 914.8 597 75.4
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 9.7e-264 913.3 596 75.5
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 1.7e-263 912.5 593 75.7
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 6.3e-263 910.6 574 77.7
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 2.6e-261 905.2 593 75.2
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 3.5e-261 904.8 599 74.8
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 6.5e-260 900.6 574 77.0
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 6.5e-260 900.6 596 74.2
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 8.5e-260 900.2 593 74.2
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.9e-259 899.0 601 73.5
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.9e-259 899.0 603 73.5
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 5.5e-259 897.5 596 74.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 1.6e-258 896.0 601 74.0
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.7e-258 895.2 596 73.0
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 4.7e-258 894.4 596 73.7
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.4e-257 892.9 601 73.7
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 4.4e-256 887.9 601 73.4
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 5.7e-256 887.5 601 73.0
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 1.7e-255 885.9 596 73.7
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.2e-255 885.6 599 72.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 6.3e-255 884.0 591 74.1
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 2.4e-254 882.1 595 71.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.4e-254 882.1 601 73.4
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.1e-254 881.7 596 73.0
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.7e-252 875.9 593 73.0
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 3.8e-252 874.8 595 73.1
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 8.5e-252 873.6 595 72.1
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.5e-251 872.1 591 70.6
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 2.5e-251 872.1 592 73.1
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 3.2e-251 871.7 591 70.9
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 7.2e-251 870.5 592 69.9
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 2.1e-250 869.0 592 73.1
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 3.6e-250 868.2 595 71.8
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.4e-249 866.3 594 71.4
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 1.1e-246 856.7 592 71.5
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.1e-246 855.1 596 71.8
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 5.3e-246 854.4 592 70.6
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 7.0e-246 854.0 591 71.7
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 9.1e-246 853.6 592 71.8
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.6e-245 852.8 595 69.7
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 2.7e-245 852.0 599 69.8
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 4.5e-245 851.3 597 70.7
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.3e-244 849.7 592 70.6
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 5.0e-244 847.8 595 70.4
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 6.5e-244 847.4 597 70.0
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 1.5e-243 846.3 592 70.1
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.9e-243 845.9 607 70.2
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 3.2e-243 845.1 592 68.6
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.7e-242 842.0 622 69.3
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 4.7e-242 841.3 604 70.0
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 4.0e-241 838.2 597 69.0
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 5.2e-241 837.8 596 69.0
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 6.8e-241 837.4 595 69.2
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.8e-241 837.4 569 70.1
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 8.8e-241 837.0 585 69.6
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 6.6e-236 820.8 596 68.1
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 8.6e-236 820.5 582 70.8
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 1.1e-235 820.1 589 67.9
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 9.5e-235 817.0 598 67.1
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 9.5e-235 817.0 597 68.2
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.6e-234 816.2 595 69.1
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 8.0e-234 813.9 600 67.2
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 4.0e-233 811.6 605 67.3
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 5.2e-233 811.2 594 67.0
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 4.4e-232 808.1 595 68.4
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.3e-231 806.6 594 65.2
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 2.2e-231 805.8 602 65.6
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 4.9e-231 804.7 599 67.1
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.2e-229 800.0 594 65.0
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 1.7e-228 796.2 603 65.5
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 2.9e-228 795.4 591 66.8
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 2.5e-227 792.3 600 66.7
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.2e-226 790.0 601 64.9
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 3.6e-226 788.5 601 65.1
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.3e-223 780.0 603 64.8
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.3e-223 780.0 603 64.8
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 2.2e-223 779.2 595 65.4
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 6.0e-221 771.2 592 66.0
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.3e-220 770.0 589 64.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 5.4e-206 721.5 535 66.0
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 8.9e-201 704.1 592 58.8
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 1.2e-200 703.7 593 60.2
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 1.1e-193 680.6 476 72.5
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 2.0e-192 676.4 418 82.8
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 4.9e-191 671.8 568 59.0
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 7.1e-182 641.3 419 75.2
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 3.9e-180 635.6 491 63.7
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.4e-177 627.1 416 74.8
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 4.3e-171 605.5 604 51.5
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 9.6e-171 604.4 606 51.3
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 3.2e-166 589.3 399 74.9
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 1.6e-162 577.0 416 67.5
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 5.9e-152 542.0 598 47.0
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.2e-149 534.3 399 65.9
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.5e-139 500.7 599 46.1
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 9.8e-131 471.5 425 61.6
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 7.7e-128 461.8 592 44.9
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 2.6e-107 393.7 271 73.4
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 3.6e-101 373.2 738 34.4
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 5.0e-50 203.4 182 55.5
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 6.1e-48 196.4 172 54.7
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 2.2e-42 177.9 129 65.9
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 6.1e-40 169.9 211 45.5
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.6e-30 137.9 116 56.0
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 2.3e-23 114.8 85 72.9
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.6e-16 90.9 86 52.3
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 6.8e-15 86.7 46 84.8
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.0e-10 70.5 45 73.3
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 1.8e-07 62.0 40 70.0


User provided reference genes

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