Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.F00764 Eucalyptus grandis HOM05D006187 ORTHO05D007621 1.8e-119 432.6 209 100.0
COL.COLO4_09662 Corchorus olitorius HOM05D006187 ORTHO05D007621 3.5e-107 391.7 209 89.5
Gohir.D01G066500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 5.9e-107 391.0 209 88.0
Gorai.002G088500 Gossypium raimondii HOM05D006187 ORTHO05D007621 2.2e-106 389.0 209 87.6
arahy.Tifrunner.gnm1.ann1.KHU2SV Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-105 386.7 209 87.6
arahy.Tifrunner.gnm1.ann1.YIAG1Z Arachis hypogaea HOM05D006187 ORTHO05D007621 1.1e-105 386.7 209 87.6
Gohir.A01G079500 Gossypium hirsutum HOM05D006187 ORTHO05D007621 1.1e-105 386.7 209 87.1
Haze_09689 Corylus avellana HOM05D006187 ORTHO05D007621 1.9e-105 386.0 209 88.5
Prupe.4G212700 Prunus persica HOM05D006187 ORTHO05D007621 1.2e-104 383.3 209 88.0
Manes.15G071900 Manihot esculenta HOM05D006187 ORTHO05D007621 3.6e-104 381.7 209 87.6
TAR626G1058 Trochodendron aralioides HOM05D006187 ORTHO05D007621 6.1e-104 380.9 209 87.1
Lalb_Chr10g0106971 Lupinus albus HOM05D006187 ORTHO05D007621 1.8e-103 379.4 209 85.6
CiPaw.11G189300 Carya illinoinensis HOM05D006187 ORTHO05D007621 2.3e-103 379.0 209 89.0
Potri.011G139500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.3e-103 379.0 209 86.6
Cfa020345 Carpinus fangiana HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 86.6
Ciclev10009486m.g Citrus clementina HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 86.6
THA.LOC104816937 Tarenaya hassleriana HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 85.6
Thecc.07G036900 Theobroma cacao HOM05D006187 ORTHO05D007621 3.0e-103 378.6 209 85.6
PGR083G2749 Punica granatum HOM05D006187 ORTHO05D007621 6.7e-103 377.5 209 85.6
Duzib170G0579 Durio zibethinus HOM05D006187 ORTHO05D007621 1.5e-102 376.3 209 85.6
Cc05_g13690 Coffea canephora HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 85.6
MD11G1218600 Malus domestica HOM05D006187 ORTHO05D007621 2.0e-102 375.9 209 86.6
Potri.001G435500 Populus trichocarpa HOM05D006187 ORTHO05D007621 2.6e-102 375.6 209 86.1
Nn1g03532 Nelumbo nucifera HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 85.2
Sed0017183 Sechium edule HOM05D006187 ORTHO05D007621 4.4e-102 374.8 209 84.2
CsaV3_7G021800 Cucumis sativus L. HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 84.7
Dinv22262 Davidia involucrata HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 85.2
Phvul.008G266900 Phaseolus vulgaris HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 85.2
VMungo0647G0583 Vigna mungo HOM05D006187 ORTHO05D007621 7.4e-102 374.0 209 85.2
CANSAT11G0252 Cannabis sativa HOM05D006187 ORTHO05D007621 9.7e-102 373.6 209 84.7
RcHm_v2.0_Chr5g0039431 Rosa chinensis HOM05D006187 ORTHO05D007621 1.3e-101 373.2 209 86.1
LjContig00272g0005891 Lotus japonicus HOM05D006187 ORTHO05D007621 2.2e-101 372.5 209 83.3
CiPaw.12G129700 Carya illinoinensis HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 85.6
RhsimUnG0250600 Rhododendron simsii HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 83.7
TWI39G1048 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 8.2e-101 370.5 209 83.3
DCAR_022562 Daucus carota HOM05D006187 ORTHO05D007621 1.1e-100 370.2 209 82.8
MSTRG.26280 Avicennia marina HOM05D006187 ORTHO05D007621 2.4e-100 369.0 209 83.7
TPR.G1184 Trifolium pratense HOM05D006187 ORTHO05D007621 3.1e-100 368.6 209 82.8
Ca_06320_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 5.3e-100 367.9 209 83.7
Ca_30809_v3 Cicer arietinum L. HOM05D006187 ORTHO05D007621 5.3e-100 367.9 209 83.7
Oeu005532.1 Olea europaea HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 83.3
Psat2g010920 Pisum sativum HOM05D006187 ORTHO05D007621 7.0e-100 367.5 209 82.3
Ah.06g186030 Amaranthus hybridus HOM05D006187 ORTHO05D007621 1.2e-99 366.7 209 81.3
ECA246G0646 Erigeron canadensis HOM05D006187 ORTHO05D007621 2.0e-99 365.9 209 83.3
FvH4_3g22670 Fragaria vesca HOM05D006187 ORTHO05D007621 4.5e-99 364.8 209 83.7
Dinv40753 Davidia involucrata HOM05D006187 ORTHO05D007621 1.0e-98 363.6 209 83.7
Aqoxy1G03401 Aquilegia oxysepala HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 82.8
CARHR040720 Cardamine hirsuta HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 82.8
AUR62020447 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.3e-98 363.2 209 82.8
Peaxi162Scf00964g00021 Petunia axillaris HOM05D006187 ORTHO05D007621 2.9e-98 362.1 209 82.8
Sc16g0006050 Simmondsia chinensis HOM05D006187 ORTHO05D007621 2.9e-98 362.1 209 83.3
EL10Ac4g07806 Beta vulgaris HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 82.8
A06p02950 Brassica napus HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 81.8
GSVIVG01037647001 Vitis vinifera HOM05D006187 ORTHO05D007621 3.8e-98 361.7 209 82.3
C06p05930 Brassica napus HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 82.3
PSO210G0259 Papaver somniferum HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.3
PSO832G1277 Papaver somniferum HOM05D006187 ORTHO05D007621 8.5e-98 360.5 209 81.3
Migut.K00331 Erythranthe guttata HOM05D006187 ORTHO05D007621 1.1e-97 360.1 208 81.2
Aa31LG10G3660 Aethionema arabicum HOM05D006187 ORTHO05D007621 1.5e-97 359.8 209 82.3
AUR62015764 Chenopodium quinoa HOM05D006187 ORTHO05D007621 1.9e-97 359.4 209 81.8
CAN.G337.132 Capsicum annuum HOM05D006187 ORTHO05D007621 3.2e-97 358.6 209 81.3
AL1G58340 Arabidopsis lyrata HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 81.3
BcaB07g33507 Brassica carinata HOM05D006187 ORTHO05D007621 4.2e-97 358.2 209 81.8
Carub.0001s3971 Capsella rubella HOM05D006187 ORTHO05D007621 7.2e-97 357.5 209 80.9
Thhalv10011780m.g Eutrema salsugineum HOM05D006187 ORTHO05D007621 9.4e-97 357.1 209 81.8
AT1G50670 Arabidopsis thaliana HOM05D006187 ORTHO05D007621 1.2e-96 356.7 209 80.9
BcaC08g43245 Brassica carinata HOM05D006187 ORTHO05D007621 1.2e-96 356.7 209 81.8
Zm00001eb207490 Zea mays HOM05D006187 ORTHO05D007621 1.6e-96 356.3 209 80.9
BraA06t23501Z Brassica rapa HOM05D006187 ORTHO05D007621 2.7e-96 355.5 210 81.4
Solyc07g064590.3 Solanum lycopersicum HOM05D006187 ORTHO05D007621 2.7e-96 355.5 209 80.9
PGSC0003DMG400022319 Solanum tuberosum HOM05D006187 ORTHO05D007621 3.6e-96 355.1 209 80.4
CSS0049447 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 6.1e-96 354.4 209 82.3
FAN16G3112 Fragaria x ananassa HOM05D006187 ORTHO05D007621 6.1e-96 354.4 221 79.2
SalBow5G2755 Salvia bowleyana HOM05D006187 ORTHO05D007621 8.0e-96 354.0 225 76.9
Sp1g37520 Schrenkiella parvula HOM05D006187 ORTHO05D007621 8.0e-96 354.0 209 80.4
Sopen07g032780 Solanum pennellii HOM05D006187 ORTHO05D007621 8.0e-96 354.0 209 80.4
CSS0042680 Camellia sinensis var. sinensis HOM05D006187 ORTHO05D007621 1.4e-95 353.2 209 81.8
HPP92_016292 Vanilla planifolia HOM05D006187 ORTHO05D007621 2.3e-95 352.4 208 80.8
unitig_746.g26546 Utricularia gibba HOM05D006187 ORTHO05D007621 2.0e-94 349.4 209 79.4
FAN11G0395 Fragaria x ananassa HOM05D006187 ORTHO05D007621 4.4e-94 348.2 230 76.1
FAN25G1478 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.3e-93 346.7 230 76.1
Lalb_Chr17g0348481 Lupinus albus HOM05D006187 ORTHO05D007621 1.7e-93 346.3 190 86.8
ATR0794G016 Amborella trichopoda HOM05D006187 ORTHO05D007621 6.3e-93 344.4 209 78.0
FAN21G2137 Fragaria x ananassa HOM05D006187 ORTHO05D007621 1.1e-92 343.6 240 72.9
Oeu062696.2 Olea europaea HOM05D006187 ORTHO05D007621 4.1e-92 341.7 243 70.0
MELO3C013167.2 Cucumis melo HOM05D006187 ORTHO05D007621 7.0e-92 340.9 189 85.2
Medtr5g092720 Medicago truncatula HOM05D006187 ORTHO05D007621 2.0e-91 339.3 190 82.6
TWI38G1854 Tripterygium wilfordii HOM05D006187 ORTHO05D007621 2.7e-91 339.0 187 85.0
SGA_v2.0_scaffold347G49550 Striga asiatica HOM05D006187 ORTHO05D007621 5.9e-91 337.8 209 77.0
Glyma.02G291000 Glycine max HOM05D006187 ORTHO05D007621 7.7e-91 337.4 193 82.9
Glyma.14G023700 Glycine max HOM05D006187 ORTHO05D007621 2.2e-90 335.9 185 85.9
Sabra11G0125500 Salix brachista HOM05D006187 ORTHO05D007621 8.5e-90 334.0 288 61.1
ClCG09G010800 Citrullus lanatus HOM05D006187 ORTHO05D007621 1.1e-89 333.6 209 77.5
CDE05G0514 Ceratophyllum demersum HOM05D006187 ORTHO05D007621 1.9e-89 332.8 209 76.1
Lsat_1_v5_gn_5_3960 Lactuca sativa HOM05D006187 ORTHO05D007621 2.1e-88 329.3 191 82.2
HanXRQChr05g0159371 Helianthus annuus HOM05D006187 ORTHO05D007621 6.1e-88 327.8 187 84.0
HanXRQChr08g0233871 Helianthus annuus HOM05D006187 ORTHO05D007621 1.8e-87 326.2 187 83.4
Actinidia35344 Actinidia chinensis HOM05D006187 ORTHO05D007621 2.3e-87 325.9 209 75.6
SEGI_20110 Sequoiadendron giganteum HOM05D006187 ORTHO05D007621 1.3e-85 320.1 206 74.3
SMO201G0052 Selaginella moellendorffii HOM05D006187 ORTHO05D007621 3.7e-85 318.5 208 70.7
Mapoly0105s0022 Marchantia polymorpha HOM05D006187 ORTHO05D007621 1.0e-82 310.5 209 70.8
Pp3c26_11120 Physcomitrium patens HOM05D006187 ORTHO05D007621 8.6e-82 307.4 206 71.8
QL08p010320 Quercus lobata HOM05D006187 ORTHO05D007621 6.1e-80 301.2 187 80.2
AagrBONN_evm.TU.Sc2ySwM_344.4367 Anthoceros agrestis HOM05D004720 ORTHO05D007621 1.1e-76 290.4 205 65.9
vmacro09715 Vaccinium macrocarpon HOM05D006187 ORTHO05D007621 1.0e-74 283.9 164 80.5
Nitab4.5_0011129g0020 Nicotiana tabacum HOM05D006187 ORTHO05D007621 6.6e-74 281.2 209 68.9
BolC6t35706H Brassica oleracea HOM05D006187 ORTHO05D007621 1.5e-73 280.0 164 81.1
Lj1A872G52 Lonicera japonica HOM05D006187 ORTHO05D007621 8.9e-71 270.8 151 84.8
Cre09.g409050 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 5.0e-66 255.0 204 60.8
SHI26611 Sapria himalayana HOM05D006187 ORTHO05D007621 1.4e-63 246.9 185 64.9
Hma1.2p1_0673F.1_g201350 Hydrangea macrophylla HOM05D006187 ORTHO05D007621 8.9e-63 244.2 209 61.7
MCO07G461 Micromonas commoda HOM05D006187 ORTHO05D007621 2.6e-62 242.7 208 58.7
PSO675G5262 Papaver somniferum HOM05D006187 ORTHO05D007621 8.3e-61 237.7 210 54.3
CBR_g54108 Chara braunii HOM05D006187 ORTHO05D007621 5.4e-60 235.0 168 66.1
HPP92_016312 Vanilla planifolia HOM05D006187 ORTHO05D007621 9.5e-57 224.2 135 79.3
PRCOL_00006206 Prasinoderma coloniale HOM05D006187 ORTHO05D007621 2.6e-54 216.1 206 51.9
Cpa.g.sc97.3 Carica papaya HOM05D006187 ORTHO05D007621 1.7e-53 213.4 162 66.0
PSO541G4439 Papaver somniferum HOM05D006187 ORTHO05D007621 1.3e-45 187.2 208 47.1
MBI18_g14476_MAGBIO Magnolia biondii HOM05D006187 ORTHO05D007621 1.1e-39 167.5 149 60.4
Haze_26155 Corylus avellana HOM05D006187 ORTHO05D007621 9.0e-39 164.5 207 39.1
Cre06.g274700 Chlamydomonas reinhardtii HOM05D006187 ORTHO05D007621 3.5e-35 152.5 145 49.0
Prupe.4G233700 Prunus persica HOM05D006187 ORTHO05D007621 3.9e-34 149.1 127 62.2
Os02g0164800 Oryza sativa ssp. japonica HOM05D006187 ORTHO05D007621 2.1e-32 143.3 84 78.6
Nitab4.5_0001913g0160 Nicotiana tabacum HOM05D006187 ORTHO05D007621 3.6e-32 142.5 84 79.8
PSO675G9324 Papaver somniferum HOM05D006187 ORTHO05D007621 2.6e-30 136.3 137 48.9
Cfa025770 Carpinus fangiana HOM05D006187 ORTHO05D007621 2.3e-26 123.2 224 34.4
HPP92_016311 Vanilla planifolia HOM05D006187 ORTHO05D007621 8.7e-26 121.3 74 77.0
AUR62015776 Chenopodium quinoa HOM05D006187 ORTHO05D007621 2.3e-18 96.7 76 65.8
QL08p010315 Quercus lobata HOM05D006187 ORTHO05D007621 2.4e-15 86.7 43 88.4


User provided reference genes

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