Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03602 Eucalyptus grandis HOM05D000067 ORTHO05D001807 7.7e-42 173.3 83 100.0
Eucgr.E03605 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.5e-21 105.9 55 89.1
Eucgr.E03606 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.5e-21 105.9 55 89.1
Eucgr.E03574 Eucalyptus grandis HOM05D000067 ORTHO05D001807 5.7e-21 104.0 55 87.3
Eucgr.E03566 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.3e-20 102.8 55 87.3
Eucgr.E03572 Eucalyptus grandis HOM05D000067 ORTHO05D001807 6.3e-20 100.5 55 83.6
Eucgr.E03571 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.1e-19 99.8 55 83.6
Eucgr.E03062 Eucalyptus grandis HOM05D000067 ORTHO05D001807 9.1e-19 96.7 51 88.2
GSVIVG01005272001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.0e-09 66.6 74 47.3
Haze_06660 Corylus avellana HOM05D000067 ORTHO05D001807 3.8e-09 64.7 74 47.3
GSVIVG01005218001 Vitis vinifera HOM05D000067 ORTHO05D001807 3.8e-09 64.7 74 45.9
GSVIVG01005221001 Vitis vinifera HOM05D000067 ORTHO05D001807 3.8e-09 64.7 74 45.9
GSVIVG01006589001 Vitis vinifera HOM05D000067 ORTHO05D001807 3.8e-09 64.7 74 45.9
GSVIVG01006591001 Vitis vinifera HOM05D000067 ORTHO05D001807 3.8e-09 64.7 74 45.9
GSVIVG01005220001 Vitis vinifera HOM05D000067 ORTHO05D001807 8.5e-09 63.5 74 44.6
GSVIVG01005268001 Vitis vinifera HOM05D000067 ORTHO05D001807 8.5e-09 63.5 74 44.6
GSVIVG01006465001 Vitis vinifera HOM05D000067 ORTHO05D001807 8.5e-09 63.5 74 44.6
GSVIVG01005271001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.1e-08 63.2 74 45.9
CiPaw.10G113300 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.5e-08 62.8 74 47.3
QL05p077515 Quercus lobata HOM05D000067 ORTHO05D001807 1.5e-08 62.8 75 45.3
CSS0000049 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 1.9e-08 62.4 61 54.1
CSS0000223 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D001807 1.9e-08 62.4 61 54.1
Haze_06659 Corylus avellana HOM05D000067 ORTHO05D001807 1.9e-08 62.4 74 44.6
Cfa000282 Carpinus fangiana HOM05D000067 ORTHO05D001807 2.5e-08 62.0 61 52.5
GSVIVG01006469001 Vitis vinifera HOM05D000067 ORTHO05D001807 3.2e-08 61.6 63 47.6
CiPaw.10G113400 Carya illinoinensis HOM05D000067 ORTHO05D001807 4.2e-08 61.2 61 52.5
Potri.004G030400 Populus trichocarpa HOM05D000067 ORTHO05D001807 7.2e-08 60.5 61 52.5
TAR629G3492 Trochodendron aralioides HOM05D000067 ORTHO05D001807 7.2e-08 60.5 79 45.6
Potri.004G030200 Populus trichocarpa HOM05D000067 ORTHO05D001807 9.4e-08 60.1 61 50.8
Duzib235G0134 Durio zibethinus HOM05D000067 ORTHO05D001807 1.6e-07 59.3 61 50.8
Phvul.006G195600 Phaseolus vulgaris HOM05D000067 ORTHO05D001807 2.1e-07 58.9 80 47.5
Hma1.2p1_0809F.1_g221790 Hydrangea macrophylla HOM05D000067 ORTHO05D001807 2.7e-07 58.5 62 50.0
PGR042G0981 Punica granatum HOM05D000067 ORTHO05D001807 3.6e-07 58.2 55 54.5
Sed0003991 Sechium edule HOM05D000067 ORTHO05D001807 3.6e-07 58.2 52 57.7
Sed0007829 Sechium edule HOM05D000067 ORTHO05D001807 3.6e-07 58.2 52 57.7
Ciclev10004558m.g Citrus clementina HOM05D000067 ORTHO05D001807 4.7e-07 57.8 59 49.2
Ciclev10014707m.g Citrus clementina HOM05D000067 ORTHO05D001807 6.1e-07 57.4 58 50.0
QL05p077679 Quercus lobata HOM05D000067 ORTHO05D001807 6.1e-07 57.4 70 47.1
TAR627G1062 Trochodendron aralioides HOM05D000067 ORTHO05D001807 6.1e-07 57.4 63 47.6
Dinv17856 Davidia involucrata HOM05D000067 ORTHO05D001807 8.0e-07 57.0 56 55.4
CsaV3_1G011400 Cucumis sativus L. HOM05D000067 ORTHO05D001807 1.0e-06 56.6 56 51.8
Eucgr.E03598 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.0e-06 56.6 25 100.0
Eucgr.L02261 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.0e-06 56.6 25 100.0
Sabra04G0017200 Salix brachista HOM05D000067 ORTHO05D001807 1.0e-06 56.6 61 47.5
TAR629G1681 Trochodendron aralioides HOM05D000067 ORTHO05D001807 1.0e-06 56.6 81 42.0
GSVIVG01006467001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.0e-06 56.6 61 47.5
Manes.17G030610 Manihot esculenta HOM05D000067 ORTHO05D001807 1.4e-06 56.2 63 55.6
CiPaw.09G152900 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.8e-06 55.8 74 44.6
CiPaw.09G153100 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.8e-06 55.8 74 44.6
CiPaw.09G153200 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.8e-06 55.8 75 45.3
CiPaw.09G153400 Carya illinoinensis HOM05D000067 ORTHO05D001807 1.8e-06 55.8 74 44.6
MELO3C035526.2 Cucumis melo HOM05D000067 ORTHO05D001807 1.8e-06 55.8 57 52.6
Eucgr.E03570 Eucalyptus grandis HOM05D000067 ORTHO05D001807 1.8e-06 55.8 62 51.6
TAR627G0794 Trochodendron aralioides HOM05D000067 ORTHO05D001807 1.8e-06 55.8 63 46.0
GSVIVG01002718001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.8e-06 55.8 61 47.5
GSVIVG01005217001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.8e-06 55.8 61 47.5
GSVIVG01006466001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.8e-06 55.8 61 47.5
GSVIVG01006468001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.8e-06 55.8 61 47.5
GSVIVG01007468001 Vitis vinifera HOM05D000067 ORTHO05D001807 1.8e-06 55.8 61 47.5
CAN.G1174.1 Capsicum annuum HOM05D000067 ORTHO05D001807 2.3e-06 55.5 81 40.7
CiPaw.07G072900 Carya illinoinensis HOM05D000067 ORTHO05D001807 2.3e-06 55.5 74 44.6
CiPaw.07G073000 Carya illinoinensis HOM05D000067 ORTHO05D001807 2.3e-06 55.5 74 44.6
Glyma.07G187600 Glycine max HOM05D000067 ORTHO05D001807 2.3e-06 55.5 55 52.7
Potri.011G032300 Populus trichocarpa HOM05D000067 ORTHO05D001807 2.3e-06 55.5 61 50.8
Cfa000281 Carpinus fangiana HOM05D000067 ORTHO05D001807 3.0e-06 55.1 73 46.6
MD05G1334800 Malus domestica HOM05D000067 ORTHO05D001807 3.0e-06 55.1 80 40.0
Nitab4.5_0000503g0100 Nicotiana tabacum HOM05D000067 ORTHO05D000280 3.0e-06 55.1 79 36.7
vmacro15845 Vaccinium macrocarpon HOM05D000067 ORTHO05D001807 3.0e-06 55.1 75 41.3
Gohir.A10G017500 Gossypium hirsutum HOM05D000067 ORTHO05D001807 4.0e-06 54.7 59 50.8
CANSAT56G3973 Cannabis sativa HOM05D000067 ORTHO05D001807 5.2e-06 54.3 66 43.9
AUR62014629 Chenopodium quinoa HOM05D000067 ORTHO05D001807 5.2e-06 54.3 61 41.0
AUR62044185 Chenopodium quinoa HOM05D000067 ORTHO05D001807 5.2e-06 54.3 61 41.0
CANSAT21G0661 Cannabis sativa HOM05D000067 ORTHO05D000280 6.8e-06 53.9 61 45.9
CiPaw.09G153500 Carya illinoinensis HOM05D000067 ORTHO05D001807 6.8e-06 53.9 74 43.2
Duzib192G1015 Durio zibethinus HOM05D000067 ORTHO05D001807 6.8e-06 53.9 62 48.4
RcHm_v2.0_Chr5g0004801 Rosa chinensis HOM05D000067 ORTHO05D001807 6.8e-06 53.9 78 43.6
Solyc02g079840.2 Solanum lycopersicum HOM05D000067 ORTHO05D000280 6.8e-06 53.9 54 42.6
GSVIVG01036312001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.8e-06 53.9 61 41.0
CANSAT21G0355 Cannabis sativa HOM05D000067 ORTHO05D000280 8.8e-06 53.5 67 44.8
AUR62012567 Chenopodium quinoa HOM05D000067 ORTHO05D001807 8.8e-06 53.5 53 45.3
Eucgr.L03091 Eucalyptus grandis HOM05D000067 ORTHO05D001807 8.8e-06 53.5 25 96.0
Prupe.4G030400 Prunus persica HOM05D000067 ORTHO05D001807 8.8e-06 53.5 66 48.5
QL05p078196 Quercus lobata HOM05D000067 ORTHO05D001807 8.8e-06 53.5 80 41.2


User provided reference genes

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