Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E03116 Eucalyptus grandis HOM05D005670 ORTHO05D007612 8.6e-72 273.5 131 100.0
Eucgr.E03319 Eucalyptus grandis HOM05D005670 ORTHO05D007612 1.5e-60 236.1 116 96.6
QL05p039856 Quercus lobata HOM05D005670 ORTHO05D007612 1.7e-51 206.1 115 80.0
Lj1A1206G64 Lonicera japonica HOM05D005670 ORTHO05D007612 4.6e-49 198.0 115 78.3
FvH4_3g09410 Fragaria vesca HOM05D005670 ORTHO05D007612 1.3e-48 196.4 114 79.8
CSS0005949 Camellia sinensis var. sinensis HOM05D005670 ORTHO05D007612 2.3e-48 195.7 115 77.4
Rhsim02G0128200 Rhododendron simsii HOM05D005670 ORTHO05D007612 2.3e-48 195.7 115 76.5
RcHm_v2.0_Chr5g0008181 Rosa chinensis HOM05D005670 ORTHO05D007612 3.0e-48 195.3 114 77.2
FAN21G0121 Fragaria x ananassa HOM05D005670 ORTHO05D007612 3.9e-48 194.9 114 78.9
TAR626G1957 Trochodendron aralioides HOM05D005670 ORTHO05D007612 3.9e-48 194.9 115 76.5
TWI38G1891 Tripterygium wilfordii HOM05D005670 ORTHO05D007612 8.6e-48 193.7 115 73.9
PGR042G2793 Punica granatum HOM05D005670 ORTHO05D007612 2.5e-47 192.2 115 73.9
MD05G1314100 Malus domestica HOM05D005670 ORTHO05D007612 3.3e-47 191.8 114 74.6
CiPaw.09G058400 Carya illinoinensis HOM05D005670 ORTHO05D007612 4.3e-47 191.4 115 73.9
MD00G1095000 Malus domestica HOM05D005670 ORTHO05D007612 7.3e-47 190.7 114 73.7
Prupe.4G045000 Prunus persica HOM05D005670 ORTHO05D007612 9.6e-47 190.3 115 77.4
Potri.004G041800 Populus trichocarpa HOM05D005670 ORTHO05D007612 1.2e-46 189.9 114 74.6
FAN16G2869 Fragaria x ananassa HOM05D005670 ORTHO05D007612 1.6e-46 189.5 114 78.1
Sabra04G0025900 Salix brachista HOM05D005670 ORTHO05D007612 1.6e-46 189.5 114 73.7
Duzib192G0381 Durio zibethinus HOM05D005670 ORTHO05D007612 2.1e-46 189.1 114 74.6
Aqoxy1G02519 Aquilegia oxysepala HOM05D005670 ORTHO05D007612 3.6e-46 188.3 115 74.8
MSTRG.7329 Avicennia marina HOM05D005670 ORTHO05D007612 3.6e-46 188.3 114 72.8
Medtr2g013060 Medicago truncatula HOM05D005670 ORTHO05D007612 1.1e-45 186.8 115 73.9
Solyc02g078400.3 Solanum lycopersicum HOM05D005670 ORTHO05D007612 1.1e-45 186.8 115 73.0
TPR.G36745 Trifolium pratense HOM05D005670 ORTHO05D007612 1.1e-45 186.8 115 73.0
Nn1g06587 Nelumbo nucifera HOM05D005670 ORTHO05D007612 2.4e-45 185.7 114 73.7
vmacro15902 Vaccinium macrocarpon HOM05D005670 ORTHO05D007612 2.4e-45 185.7 112 74.1
PSO675G5775 Papaver somniferum HOM05D005670 ORTHO05D007612 3.1e-45 185.3 115 73.0
CANSAT35G0124 Cannabis sativa HOM05D005670 ORTHO05D007612 6.8e-45 184.1 114 70.2
Manes.16G026300 Manihot esculenta HOM05D005670 ORTHO05D007612 6.8e-45 184.1 115 73.0
Nitab4.5_0002158g0080 Nicotiana tabacum HOM05D005670 ORTHO05D007612 6.8e-45 184.1 113 72.6
Sopen02g023260 Solanum pennellii HOM05D005670 ORTHO05D007612 6.8e-45 184.1 115 71.3
Cpa.g.sc27.55 Carica papaya HOM05D005670 ORTHO05D007612 1.2e-44 183.3 114 73.7
Ciclev10014972m.g Citrus clementina HOM05D005670 ORTHO05D007612 1.2e-44 183.3 114 72.8
Nitab4.5_0005954g0030 Nicotiana tabacum HOM05D005670 ORTHO05D007612 1.5e-44 183.0 113 73.5
Atru.chr10.1904 Acer truncatum HOM05D005670 ORTHO05D007612 2.0e-44 182.6 114 70.2
Ca_00305_v3 Cicer arietinum L. HOM05D005670 ORTHO05D007612 2.0e-44 182.6 115 73.0
Glyma.15G072900 Glycine max HOM05D005670 ORTHO05D007612 2.0e-44 182.6 115 72.2
Glyma.13G240500 Glycine max HOM05D005670 ORTHO05D007612 2.6e-44 182.2 115 71.3
Lalb_Chr15g0089871 Lupinus albus HOM05D005670 ORTHO05D007612 3.4e-44 181.8 115 70.4
CAN.G1164.15 Capsicum annuum HOM05D005670 ORTHO05D007612 4.4e-44 181.4 113 71.7
Glyma.13G240600 Glycine max HOM05D005670 ORTHO05D007612 5.8e-44 181.0 115 71.3
Gohir.D10G025500 Gossypium hirsutum HOM05D005670 ORTHO05D007612 7.6e-44 180.6 114 70.2
Gohir.A10G024800 Gossypium hirsutum HOM05D005670 ORTHO05D007612 9.9e-44 180.3 114 70.2
Psat1g206560 Pisum sativum HOM05D005670 ORTHO05D007612 9.9e-44 180.3 115 71.3
PGSC0003DMG400022386 Solanum tuberosum HOM05D005670 ORTHO05D007612 9.9e-44 180.3 113 71.7
SGA_v2.0_scaffold22G09723 Striga asiatica HOM05D005670 ORTHO05D007612 9.9e-44 180.3 114 70.2
Thecc.06G189700 Theobroma cacao HOM05D005670 ORTHO05D007612 9.9e-44 180.3 114 71.9
AUR62016994 Chenopodium quinoa HOM05D005670 ORTHO05D007612 1.3e-43 179.9 115 67.8
DCAR_004080 Daucus carota HOM05D005670 ORTHO05D007612 1.3e-43 179.9 115 68.7
Peaxi162Scf00947g00005 Petunia axillaris HOM05D005670 ORTHO05D007612 1.3e-43 179.9 115 69.6
ECA236G2993 Erigeron canadensis HOM05D005670 ORTHO05D007612 2.2e-43 179.1 114 71.1
Glyma.15G073000 Glycine max HOM05D005670 ORTHO05D007612 2.2e-43 179.1 115 70.4
Lj6g0007385 Lotus japonicus HOM05D005670 ORTHO05D007612 3.8e-43 178.3 115 68.7
Phvul.006G186800 Phaseolus vulgaris HOM05D005670 ORTHO05D007612 6.4e-43 177.6 114 71.1
Gorai.011G026800 Gossypium raimondii HOM05D005670 ORTHO05D007612 8.4e-43 177.2 114 69.3
Lsat_1_v5_gn_7_18941 Lactuca sativa HOM05D005670 ORTHO05D007612 1.1e-42 176.8 114 70.2
BcaB01g01850 Brassica carinata HOM05D005670 ORTHO05D007612 1.9e-42 176.0 114 68.4
BcaC04g21352 Brassica carinata HOM05D005670 ORTHO05D007612 2.4e-42 175.6 114 67.5
C09p32840 Brassica napus HOM05D005670 ORTHO05D007612 2.4e-42 175.6 114 67.5
VMungo0540G1414 Vigna mungo HOM05D005670 ORTHO05D007612 2.4e-42 175.6 115 67.8
Migut.M01152 Erythranthe guttata HOM05D005670 ORTHO05D007612 3.2e-42 175.3 114 68.4
unitig_22.g6763 Utricularia gibba HOM05D005670 ORTHO05D007612 3.2e-42 175.3 115 66.1
VMungo0540G1652 Vigna mungo HOM05D005670 ORTHO05D007612 3.2e-42 175.3 114 69.3
AL6G48490 Arabidopsis lyrata HOM05D005670 ORTHO05D007612 4.2e-42 174.9 114 67.5
EL10Ac8g20366 Beta vulgaris HOM05D005670 ORTHO05D007612 4.2e-42 174.9 115 67.0
BolC9t56124H Brassica oleracea HOM05D005670 ORTHO05D007612 5.4e-42 174.5 114 66.7
THA.LOC104812854 Tarenaya hassleriana HOM05D005670 ORTHO05D007612 5.4e-42 174.5 115 67.8
A09p25930 Brassica napus HOM05D005670 ORTHO05D007612 7.1e-42 174.1 114 66.7
BraA09t38162Z Brassica rapa HOM05D005670 ORTHO05D007612 7.1e-42 174.1 114 66.7
Phvul.006G186700 Phaseolus vulgaris HOM05D005670 ORTHO05D007612 7.1e-42 174.1 115 67.0
Thhalv10028578m.g Eutrema salsugineum HOM05D005670 ORTHO05D007612 9.3e-42 173.7 114 67.5
HanXRQChr04g0124101 Helianthus annuus HOM05D005670 ORTHO05D007612 9.3e-42 173.7 114 69.3
Ah.09g237260 Amaranthus hybridus HOM05D005670 ORTHO05D007612 1.2e-41 173.3 115 66.1
MBI18_g16998_MAGBIO Magnolia biondii HOM05D005670 ORTHO05D007612 1.6e-41 172.9 114 65.8
Sp6g04000 Schrenkiella parvula HOM05D005670 ORTHO05D007612 1.6e-41 172.9 114 66.7
Carub.0006s3289 Capsella rubella HOM05D005670 ORTHO05D007612 2.7e-41 172.2 114 66.7
Aa31LG9G9510 Aethionema arabicum HOM05D005670 ORTHO05D007612 3.5e-41 171.8 114 65.8
AT4G04955 Arabidopsis thaliana HOM05D005670 ORTHO05D007612 3.5e-41 171.8 114 64.9
ClCG03G005950 Citrullus lanatus HOM05D005670 ORTHO05D007612 6.0e-41 171.0 115 69.6
CARHR252570 Cardamine hirsuta HOM05D005670 ORTHO05D007612 7.8e-41 170.6 114 66.7
COL.COLO4_31493 Corchorus olitorius HOM05D005670 ORTHO05D008858 1.0e-40 170.2 108 68.5
THA.LOC104806286 Tarenaya hassleriana HOM05D005670 ORTHO05D007612 1.3e-40 169.9 117 65.8
Hund23715 Selenicereus undatus HOM05D005670 ORTHO05D007612 2.3e-40 169.1 114 66.7
AUR62014803 Chenopodium quinoa HOM05D005670 ORTHO05D007612 3.9e-40 168.3 114 66.7
ATR0680G385 Amborella trichopoda HOM05D005670 ORTHO05D007612 6.6e-40 167.5 115 64.3
Zm00001eb433900 Zea mays HOM05D005670 ORTHO05D007612 6.6e-40 167.5 115 67.8
Sc05g0007760 Simmondsia chinensis HOM05D005670 ORTHO05D007612 8.7e-40 167.2 115 64.3
Sed0013715 Sechium edule HOM05D005670 ORTHO05D007612 1.1e-39 166.8 114 69.3
CDE09G0528 Ceratophyllum demersum HOM05D005670 ORTHO05D007612 9.6e-39 163.7 117 61.5
HPP92_014737 Vanilla planifolia HOM05D005670 ORTHO05D007612 1.3e-38 163.3 115 64.3
CsaV3_1G012190 Cucumis sativus L. HOM05D005670 ORTHO05D007612 1.6e-38 162.9 115 67.8
arahy.Tifrunner.gnm1.ann1.RER6EK Arachis hypogaea HOM05D005670 ORTHO05D007612 2.7e-33 145.6 114 64.0
Sed0017986 Sechium edule HOM05D005670 ORTHO05D007612 4.6e-33 144.8 115 59.1
MELO3C002593.2 Cucumis melo HOM05D005670 ORTHO05D007612 6.0e-33 144.4 140 56.4
arahy.Tifrunner.gnm1.ann1.06VRVW Arachis hypogaea HOM05D005670 ORTHO05D007612 2.5e-31 139.0 114 62.3
Haze_06486 Corylus avellana HOM05D005670 ORTHO05D007612 1.1e-29 133.7 76 76.3
FAN11G1478 Fragaria x ananassa HOM05D005670 ORTHO05D007612 9.9e-28 127.1 72 79.2
FAN18G0055 Fragaria x ananassa HOM05D005670 ORTHO05D007612 1.7e-27 126.3 116 58.6
Pp3c2_7120 Physcomitrium patens HOM05D005670 ORTHO05D007612 1.7e-27 126.3 111 50.5
Cc02_g13200 Coffea canephora HOM05D005670 ORTHO05D007612 7.1e-26 120.9 79 67.1
Mapoly0068s0105 Marchantia polymorpha HOM05D005670 ORTHO05D007612 2.7e-25 119.0 114 44.7
Mapoly0156s0028 Marchantia polymorpha HOM05D005670 ORTHO05D007612 2.7e-25 119.0 114 44.7
Pp3c14_11050 Physcomitrium patens HOM05D005670 ORTHO05D007612 1.8e-24 116.3 111 44.1
SMO145G0108 Selaginella moellendorffii HOM05D005670 ORTHO05D007612 4.3e-23 111.7 116 46.6
Zm00001eb374970 Zea mays HOM05D005670 ORTHO05D007612 9.6e-23 110.5 87 59.8
AagrBONN_evm.TU.Sc2ySwM_344.2129 Anthoceros agrestis HOM05D005670 ORTHO05D007612 1.8e-21 106.3 114 43.0
CBR_g34175 Chara braunii HOM05D005670 ORTHO05D007612 5.3e-21 104.8 113 45.1
HPP92_014748 Vanilla planifolia HOM05D005670 ORTHO05D007612 3.4e-20 102.1 73 60.3
FAN08G0180 Fragaria x ananassa HOM05D005670 ORTHO05D007612 2.2e-19 99.4 77 62.3
Dinv07548 Davidia involucrata HOM05D005670 ORTHO05D007612 6.5e-19 97.8 75 60.0
MCO09G610 Micromonas commoda HOM05D005670 ORTHO05D007612 6.0e-17 91.3 108 41.7
FvH4_5g20980 Fragaria vesca HOM05D005670 ORTHO05D007612 4.1e-13 78.6 39 87.2
Duzib235G0954 Durio zibethinus HOM05D005670 ORTHO05D007612 1.0e-11 73.9 69 49.3
Cre13.g592050 Chlamydomonas reinhardtii HOM05D005670 ORTHO05D007612 7.9e-09 64.3 115 37.4
PRCOL_00001419 Prasinoderma coloniale HOM05D005670 ORTHO05D007612 1.5e-07 60.1 108 39.8


User provided reference genes

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