Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 7.5e-222 773.5 374 100.0
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 8.8e-146 520.8 381 68.2
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 1.2e-145 520.4 343 72.0
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 1.5e-145 520.0 332 73.5
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.7e-144 516.5 326 75.2
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 4.1e-143 511.9 329 73.3
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 5.9e-142 508.1 373 67.3
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 5.9e-142 508.1 327 73.4
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 1.7e-141 506.5 347 71.5
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 6.5e-141 504.6 342 71.1
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 1.9e-140 503.1 342 71.1
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 4.2e-140 501.9 357 68.1
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 1.2e-139 500.4 327 72.2
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 5.2e-138 495.0 369 66.4
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 1.2e-137 493.8 336 69.6
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 1.2e-137 493.8 404 62.4
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 3.4e-137 492.3 361 67.3
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 5.7e-137 491.5 330 71.2
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 5.7e-137 491.5 388 63.4
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 7.5e-137 491.1 387 63.8
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 9.8e-137 490.7 363 66.4
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 3.7e-136 488.8 362 67.4
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 4.8e-136 488.4 336 68.8
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 1.1e-135 487.3 375 65.1
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 1.8e-135 486.5 334 66.8
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 4.1e-135 485.3 365 66.0
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 9.1e-135 484.2 350 67.1
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 1.2e-134 483.8 329 69.6
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.2e-134 483.8 329 67.2
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 2.0e-134 483.0 342 69.0
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 3.5e-134 482.3 332 70.2
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 4.5e-134 481.9 371 65.0
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 5.9e-134 481.5 329 69.3
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 5.9e-134 481.5 355 66.5
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 7.7e-134 481.1 390 62.3
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.0e-133 480.7 327 68.5
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.3e-133 480.3 335 66.9
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.7e-133 479.9 390 62.1
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 3.8e-133 478.8 371 64.7
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 5.0e-133 478.4 325 67.7
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 5.0e-133 478.4 365 64.7
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 6.6e-133 478.0 337 69.4
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 1.1e-132 477.2 329 69.3
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.1e-132 477.2 334 68.9
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.5e-132 476.9 327 69.7
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.5e-132 476.9 327 69.7
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.5e-132 476.9 336 68.8
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 1.9e-132 476.5 330 68.2
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 3.3e-132 475.7 368 63.3
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 1.2e-131 473.8 334 68.9
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.2e-131 473.8 390 61.3
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 1.2e-131 473.8 337 67.4
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 1.4e-130 470.3 329 67.8
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.8e-130 469.9 355 66.2
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.2e-129 467.2 380 60.5
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 1.5e-129 466.8 325 67.4
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 2.0e-129 466.5 347 65.1
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 2.6e-129 466.1 388 60.6
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 4.4e-129 465.3 334 66.2
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 4.4e-129 465.3 357 63.9
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 5.7e-129 464.9 372 61.8
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 9.8e-129 464.2 357 63.6
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.3e-128 463.8 329 68.1
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.2e-128 463.0 373 63.0
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 3.7e-128 462.2 364 63.2
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 8.3e-128 461.1 359 62.4
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.4e-127 460.3 311 68.8
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 4.5e-126 455.3 349 63.6
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 1.7e-125 453.4 373 61.9
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 2.3e-125 453.0 353 62.3
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 2.3e-125 453.0 370 61.9
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 5.0e-125 451.8 339 67.0
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 6.6e-125 451.4 376 60.9
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 8.6e-125 451.1 405 59.5
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.5e-124 450.3 307 69.4
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 5.6e-124 448.4 322 65.2
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 2.1e-123 446.4 347 61.7
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.0e-122 444.1 353 62.9
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 3.0e-122 442.6 362 63.0
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 5.2e-122 441.8 320 67.8
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 1.2e-121 440.7 322 64.9
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 2.0e-121 439.9 329 63.8
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 2.6e-121 439.5 344 63.4
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 9.8e-121 437.6 337 62.9
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 1.1e-119 434.1 374 60.2
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 2.4e-119 433.0 305 68.9
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 3.2e-119 432.6 329 63.8
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 9.2e-119 431.0 333 62.2
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 1.2e-118 430.6 327 65.4
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 4.6e-118 428.7 323 62.2
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 2.3e-117 426.4 282 72.3
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 3.0e-117 426.0 281 72.6
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.5e-116 423.7 365 57.5
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 2.5e-116 422.9 365 60.5
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 1.8e-114 416.8 283 68.6
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 6.8e-114 414.8 375 58.7
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 3.4e-113 412.5 373 59.0
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 4.4e-113 412.1 272 71.3
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 5.1e-109 398.7 304 62.5
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 1.9e-108 396.7 388 55.4
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 4.0e-106 389.0 329 59.6
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 1.7e-104 383.6 284 65.5
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 6.4e-104 381.7 329 58.4
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.2e-99 367.5 300 58.0
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 5.2e-98 362.1 358 53.4
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 7.8e-94 348.2 286 60.5
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 1.3e-93 347.4 330 56.1
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 1.2e-91 340.9 305 53.4
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 1.3e-88 330.9 316 56.3
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 8.7e-85 318.2 294 54.1
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 9.0e-82 308.1 217 67.3
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 1.9e-76 290.4 301 48.8
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 6.4e-72 275.4 262 54.6
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 7.9e-70 268.5 237 55.7
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 1.8e-69 267.3 204 60.8
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 7.6e-65 251.9 299 42.8
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 3.8e-64 249.6 296 40.9
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 4.2e-63 246.1 293 44.7
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 6.9e-58 228.8 297 43.4
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 1.7e-48 197.6 129 70.5
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 5.5e-39 166.0 151 55.6
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 1.5e-31 141.4 90 73.3
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 3.2e-31 140.2 85 75.3
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 1.4e-29 134.8 199 37.7
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.7e-22 110.5 69 69.6
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.2e-12 78.6 101 43.6
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 8.3e-11 72.4 42 76.2
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 2.7e-09 67.4 77 46.8
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 1.2e-06 58.5 70 40.0


User provided reference genes

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