Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 4.3e-98 361.3 178 100.0
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.4e-88 329.7 177 93.2
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 8.9e-88 327.0 177 93.8
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 8.9e-88 327.0 177 93.8
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 8.9e-88 327.0 177 93.8
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 8.9e-88 327.0 177 93.8
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 2.0e-87 325.9 177 93.2
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 3.4e-87 325.1 177 92.7
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 7.5e-87 323.9 177 92.7
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 9.8e-87 323.6 177 93.2
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 1.3e-86 323.2 177 92.1
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 4.9e-86 321.2 177 92.7
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 6.4e-86 320.9 177 92.1
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 6.4e-86 320.9 177 92.1
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 6.4e-86 320.9 177 92.1
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 6.4e-86 320.9 177 92.1
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 6.4e-86 320.9 177 92.1
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 6.4e-86 320.9 177 92.1
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 1.9e-85 319.3 177 91.5
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 2.4e-85 318.9 177 92.7
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 9.2e-85 317.0 177 91.5
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 4.6e-84 314.7 177 91.0
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 1.5e-82 309.7 177 88.7
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.5e-82 309.7 177 89.3
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 7.3e-82 307.4 176 88.6
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 2.1e-81 305.8 177 88.7
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 2.1e-81 305.8 177 88.7
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.8e-80 302.8 177 87.0
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 2.3e-80 302.4 177 89.8
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.3e-78 293.9 178 86.5
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 4.6e-76 288.1 165 88.5
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 6.0e-68 261.2 154 85.7
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 6.6e-67 257.7 177 79.7
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.9e-62 242.3 142 88.0
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.1e-61 240.4 177 75.1
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.6e-60 236.5 153 80.4
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 7.6e-55 217.6 130 86.2
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 7.6e-55 217.6 119 93.3
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 3.8e-54 215.3 130 85.4
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 5.8e-47 191.4 127 81.1
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 1.1e-45 187.2 121 79.3
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.9e-45 186.4 100 91.0
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 2.3e-43 179.5 117 82.1
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 7.6e-39 164.5 99 84.8
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 1.0e-35 154.1 133 64.7
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 7.4e-34 147.9 84 90.5
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 9.7e-26 120.9 69 91.3
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 2.4e-24 116.3 78 79.5
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 6.9e-24 114.8 68 88.2
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.2e-23 114.0 69 88.4
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 7.2e-21 104.8 132 48.5
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 6.1e-20 101.7 59 89.8
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 6.1e-20 101.7 66 81.8
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 2.0e-18 96.7 57 89.5
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 4.4e-18 95.5 58 74.1
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 2.4e-16 89.7 69 73.9
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 8.5e-14 81.3 61 73.8
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 5.3e-08 62.0 37 86.5


User provided reference genes

Program Settings