Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.E01334 Eucalyptus grandis HOM05D004437 ORTHO05D005401 1.2e-111 406.8 243 100.0
Duzib138G0705 Durio zibethinus HOM05D004437 ORTHO05D005401 1.0e-65 254.2 129 93.8
Gohir.A11G083500 Gossypium hirsutum HOM05D004437 ORTHO05D005401 1.4e-64 250.4 128 93.0
Gorai.007G093600 Gossypium raimondii HOM05D004437 ORTHO05D005401 1.4e-64 250.4 128 93.0
Duzib133G0135 Durio zibethinus HOM05D004437 ORTHO05D005401 1.9e-64 250.0 129 93.0
PGR042G1009 Punica granatum HOM05D004437 ORTHO05D005401 3.2e-64 249.2 127 96.1
Gohir.D11G087600 Gossypium hirsutum HOM05D004437 ORTHO05D005401 7.2e-64 248.1 128 92.2
Thecc.01G371500 Theobroma cacao HOM05D004437 ORTHO05D005401 9.4e-64 247.7 127 92.9
TAR374G0190 Trochodendron aralioides HOM05D004437 ORTHO05D005401 1.8e-62 243.4 127 92.1
CDE06G2826 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 3.0e-62 242.7 127 92.9
Sc22g0000410 Simmondsia chinensis HOM05D004437 ORTHO05D005401 1.1e-61 240.7 127 90.6
TWI23G1180 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 3.3e-61 239.2 128 89.8
Nn1g01279 Nelumbo nucifera HOM05D004437 ORTHO05D005401 7.4e-61 238.0 129 88.4
CsaV3_3G003440 Cucumis sativus L. HOM05D004437 ORTHO05D005401 1.3e-60 237.3 128 88.3
MELO3C014010.2 Cucumis melo HOM05D004437 ORTHO05D005401 1.7e-60 236.9 128 87.5
GSVIVG01027575001 Vitis vinifera HOM05D004437 ORTHO05D005401 1.7e-60 236.9 126 91.3
Ciclev10022649m.g Citrus clementina HOM05D004437 ORTHO05D005401 6.3e-60 235.0 127 89.0
Atru.chr5.365 Acer truncatum HOM05D004437 ORTHO05D005401 1.4e-59 233.8 127 88.2
ATR0661G478 Amborella trichopoda HOM05D004437 ORTHO05D005401 2.4e-59 233.0 127 89.0
CiPaw.12G100900 Carya illinoinensis HOM05D004437 ORTHO05D005401 2.4e-59 233.0 129 86.0
QL08p051220 Quercus lobata HOM05D004437 ORTHO05D005401 3.1e-59 232.6 128 87.5
TWI14G0837 Tripterygium wilfordii HOM05D004437 ORTHO05D005401 3.1e-59 232.6 130 87.7
Aqoxy5G03951 Aquilegia oxysepala HOM05D004437 ORTHO05D005401 6.9e-59 231.5 127 85.8
Atru.chr9.1501 Acer truncatum HOM05D004437 ORTHO05D005401 9.1e-59 231.1 130 85.4
Sed0010224 Sechium edule HOM05D004437 ORTHO05D005401 1.2e-58 230.7 127 85.0
Dinv43738 Davidia involucrata HOM05D004437 ORTHO05D005401 7.7e-58 228.0 127 89.0
RcHm_v2.0_Chr1g0351651 Rosa chinensis HOM05D004437 ORTHO05D005401 7.7e-58 228.0 129 86.0
VMungo0331G2039 Vigna mungo HOM05D004437 ORTHO05D005401 7.7e-58 228.0 127 88.2
Phvul.010G087700 Phaseolus vulgaris HOM05D004437 ORTHO05D005401 1.7e-57 226.9 127 87.4
THA.LOC104802003 Tarenaya hassleriana HOM05D004437 ORTHO05D005401 1.7e-57 226.9 128 82.8
Glyma.03G019600 Glycine max HOM05D004437 ORTHO05D005401 3.8e-57 225.7 127 87.4
Haze_08988 Corylus avellana HOM05D004437 ORTHO05D005401 5.0e-57 225.3 144 79.9
TAR629G1686 Trochodendron aralioides HOM05D004437 ORTHO05D005401 5.0e-57 225.3 127 85.8
Cfa012070 Carpinus fangiana HOM05D004437 ORTHO05D005401 6.5e-57 224.9 145 79.3
CsaV3_3G009410 Cucumis sativus L. HOM05D004437 ORTHO05D005401 8.5e-57 224.6 129 84.5
Dinv32406 Davidia involucrata HOM05D004437 ORTHO05D005401 1.1e-56 224.2 127 88.2
Prupe.2G150900 Prunus persica HOM05D004437 ORTHO05D005401 2.5e-56 223.0 129 83.7
Manes.01G263900 Manihot esculenta HOM05D004437 ORTHO05D005401 3.2e-56 222.6 131 85.5
Manes.05G042100 Manihot esculenta HOM05D004437 ORTHO05D005401 3.2e-56 222.6 131 85.5
A05p05600 Brassica napus HOM05D004437 ORTHO05D005401 4.2e-56 222.2 128 81.2
C04p06550 Brassica napus HOM05D004437 ORTHO05D005401 4.2e-56 222.2 128 81.2
BolC4t22280H Brassica oleracea HOM05D004437 ORTHO05D005401 4.2e-56 222.2 128 81.2
BraA05t19533Z Brassica rapa HOM05D004437 ORTHO05D005401 4.2e-56 222.2 128 81.2
CANSAT21G0327 Cannabis sativa HOM05D004437 ORTHO05D005401 9.4e-56 221.1 123 86.2
Actinidia09575 Actinidia chinensis HOM05D004437 ORTHO05D005401 1.2e-55 220.7 126 86.5
MELO3C006160.2 Cucumis melo HOM05D004437 ORTHO05D005401 1.2e-55 220.7 127 84.3
Ca_23785_v3 Cicer arietinum L. HOM05D004437 ORTHO05D005401 1.6e-55 220.3 127 83.5
BcaB02g09022 Brassica carinata HOM05D004437 ORTHO05D005401 2.1e-55 219.9 128 79.7
CiPaw.01G258300 Carya illinoinensis HOM05D004437 ORTHO05D005401 2.1e-55 219.9 127 84.3
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 2.1e-55 219.9 127 84.3
Medtr8g033340 Medicago truncatula HOM05D004437 ORTHO05D005401 2.1e-55 219.9 127 84.3
RcHm_v2.0_Chr7g0199901 Rosa chinensis HOM05D004437 ORTHO05D005401 2.1e-55 219.9 126 83.3
Lalb_Chr10g0097651 Lupinus albus HOM05D004437 ORTHO05D005401 2.7e-55 219.5 129 84.5
CARHR140860 Cardamine hirsuta HOM05D004437 ORTHO05D005401 3.6e-55 219.2 128 80.5
MSTRG.25195 Avicennia marina HOM05D004437 ORTHO05D005401 4.7e-55 218.8 130 83.8
MD04G1070900 Malus domestica HOM05D004437 ORTHO05D005401 4.7e-55 218.8 127 81.1
Psat4g150640 Pisum sativum HOM05D004437 ORTHO05D005401 4.7e-55 218.8 127 83.5
Sp4g27680 Schrenkiella parvula HOM05D004437 ORTHO05D005401 6.1e-55 218.4 128 80.5
Carub.0004s2829 Capsella rubella HOM05D004437 ORTHO05D005401 1.4e-54 217.2 128 79.7
Migut.C00761 Erythranthe guttata HOM05D004437 ORTHO05D005401 1.8e-54 216.9 130 83.1
Lj3g0004540 Lotus japonicus HOM05D004437 ORTHO05D005401 1.8e-54 216.9 126 82.5
COL.COLO4_23799 Corchorus olitorius HOM05D004437 ORTHO05D005401 2.3e-54 216.5 128 81.2
Nitab4.5_0007346g0070 Nicotiana tabacum HOM05D004437 ORTHO05D005401 3.0e-54 216.1 126 84.1
HanXRQChr04g0122121 Helianthus annuus HOM05D004437 ORTHO05D005401 5.1e-54 215.3 129 82.9
Lsat_1_v5_gn_7_6120 Lactuca sativa HOM05D004437 ORTHO05D005401 5.1e-54 215.3 129 82.2
MD02G1197700 Malus domestica HOM05D004437 ORTHO05D005401 5.1e-54 215.3 126 84.1
FvH4_7g12660 Fragaria vesca HOM05D004437 ORTHO05D005401 8.8e-54 214.5 131 81.7
FAN10G4017 Fragaria x ananassa HOM05D004437 ORTHO05D005401 8.8e-54 214.5 131 81.7
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla HOM05D004437 ORTHO05D005401 8.8e-54 214.5 127 82.7
HanXRQChr06g0169271 Helianthus annuus HOM05D004437 ORTHO05D005401 1.1e-53 214.2 129 82.2
Os02g0122000 Oryza sativa ssp. japonica HOM05D004437 ORTHO05D005401 1.1e-53 214.2 129 82.9
FAN08G0331 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.0e-53 213.4 126 81.7
CAN.G1608.2 Capsicum annuum HOM05D004437 ORTHO05D005401 2.6e-53 213.0 129 82.2
Cc02_g36970 Coffea canephora HOM05D004437 ORTHO05D005401 2.6e-53 213.0 126 81.7
Thhalv10001671m.g Eutrema salsugineum HOM05D004437 ORTHO05D005401 3.3e-53 212.6 127 79.5
FAN10G0783 Fragaria x ananassa HOM05D004437 ORTHO05D005401 4.4e-53 212.2 127 81.9
PSO478G3285 Papaver somniferum HOM05D004437 ORTHO05D005401 4.4e-53 212.2 123 84.6
Peaxi162Scf00988g00110 Petunia axillaris HOM05D004437 ORTHO05D005401 4.4e-53 212.2 125 83.2
Prupe.5G087000 Prunus persica HOM05D004437 ORTHO05D005401 4.4e-53 212.2 125 80.0
FvH4_5g01190 Fragaria vesca HOM05D004437 ORTHO05D005401 5.7e-53 211.8 126 81.0
PSO782G1895 Papaver somniferum HOM05D004437 ORTHO05D005401 7.4e-53 211.5 123 84.6
Potri.003G119300 Populus trichocarpa HOM05D004437 ORTHO05D005401 9.7e-53 211.1 125 83.2
Hund14703 Selenicereus undatus HOM05D004437 ORTHO05D005401 1.3e-52 210.7 124 83.1
ClCG05G001990 Citrullus lanatus HOM05D004437 ORTHO05D005401 1.7e-52 210.3 151 72.8
FAN04G1903 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.7e-52 210.3 126 80.2
Solyc05g047690.3 Solanum lycopersicum HOM05D004437 ORTHO05D005401 1.7e-52 210.3 132 81.1
Sopen05g027940 Solanum pennellii HOM05D004437 ORTHO05D005401 1.7e-52 210.3 132 81.1
PGSC0003DMG400013695 Solanum tuberosum HOM05D004437 ORTHO05D005401 1.7e-52 210.3 132 81.1
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea HOM05D004437 ORTHO05D005401 3.7e-52 209.1 127 81.1
Hund16975 Selenicereus undatus HOM05D004437 ORTHO05D005401 3.7e-52 209.1 126 81.0
COL.COLO4_12656 Corchorus olitorius HOM05D004437 ORTHO05D005401 4.8e-52 208.8 129 80.6
FAN13G0465 Fragaria x ananassa HOM05D004437 ORTHO05D005401 4.8e-52 208.8 132 78.8
Zm00001eb208420 Zea mays HOM05D004437 ORTHO05D005401 4.8e-52 208.8 131 79.4
AL4G44810 Arabidopsis lyrata HOM05D004437 ORTHO05D005401 6.3e-52 208.4 128 76.6
Potri.002G151500 Populus trichocarpa HOM05D004437 ORTHO05D005401 6.3e-52 208.4 121 84.3
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea HOM05D004437 ORTHO05D005401 1.4e-51 207.2 127 80.3
AT2G45640 Arabidopsis thaliana HOM05D004437 ORTHO05D005401 5.3e-51 205.3 128 75.8
MSTRG.1255 Avicennia marina HOM05D004437 ORTHO05D005401 5.3e-51 205.3 125 81.6
CSS0011172 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 5.3e-51 205.3 118 85.6
ClCG00G000160 Citrullus lanatus HOM05D004437 ORTHO05D005401 7.0e-51 204.9 128 78.9
ClCG10G003410 Citrullus lanatus HOM05D004437 ORTHO05D005401 7.0e-51 204.9 128 78.9
ECA236G3516 Erigeron canadensis HOM05D004437 ORTHO05D005401 9.1e-51 204.5 123 82.9
CSS0004475 Camellia sinensis var. sinensis HOM05D004437 ORTHO05D005401 1.5e-50 203.8 116 87.1
SalBow7G1560 Salvia bowleyana HOM05D004437 ORTHO05D005401 1.5e-50 203.8 140 75.0
Lsat_1_v5_gn_7_59201 Lactuca sativa HOM05D004437 ORTHO05D005401 2.0e-50 203.4 134 76.9
AUR62017329 Chenopodium quinoa HOM05D004437 ORTHO05D005401 4.5e-50 202.2 123 78.9
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis HOM05D004437 ORTHO05D005401 5.9e-50 201.8 128 77.3
AUR62010560 Chenopodium quinoa HOM05D004437 ORTHO05D005401 1.0e-49 201.1 119 79.8
SGA_v2.0_scaffold201G41379 Striga asiatica HOM05D000186 ORTHO05D001124 1.0e-49 201.1 119 82.4
SEGI_23012 Sequoiadendron giganteum HOM05D004437 ORTHO05D005401 3.8e-49 199.1 132 76.5
SGA_v2.0_scaffold11G05840 Striga asiatica HOM05D000186 ORTHO05D001124 3.8e-49 199.1 118 82.2
vmacro13357 Vaccinium macrocarpon HOM05D004437 ORTHO05D005401 7.2e-48 194.9 182 61.0
unitig_578.g16077 Utricularia gibba HOM05D002183 ORTHO05D002169 1.6e-47 193.7 116 81.9
Mapoly0086s0082 Marchantia polymorpha HOM05D004437 ORTHO05D005401 3.6e-47 192.6 128 75.0
Pp3c14_24540 Physcomitrium patens HOM05D004437 ORTHO05D005401 8.0e-47 191.4 140 70.0
Potri.014G074000 Populus trichocarpa HOM05D004437 ORTHO05D005401 8.0e-47 191.4 131 74.0
MBI04_g06621_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 1.0e-46 191.0 106 88.7
MBI04_g34692_MAGBIO Magnolia biondii HOM05D004437 ORTHO05D005401 1.4e-46 190.7 105 89.5
CBR_g4404 Chara braunii HOM05D004437 ORTHO05D005401 3.9e-46 189.1 119 79.0
Nitab4.5_0001702g0190 Nicotiana tabacum HOM05D004437 ORTHO05D005401 1.1e-45 187.6 126 77.0
Nitab4.5_0001127g0160 Nicotiana tabacum HOM05D004437 ORTHO05D005401 2.0e-45 186.8 125 76.0
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis HOM05D004437 ORTHO05D005401 2.6e-45 186.4 119 76.5
AUR62004271 Chenopodium quinoa HOM05D004437 ORTHO05D005401 2.6e-45 186.4 129 72.9
Nitab4.5_0004622g0030 Nicotiana tabacum HOM05D004437 ORTHO05D005401 3.3e-45 186.0 120 76.7
SMO230G0007 Selaginella moellendorffii HOM05D004437 ORTHO05D005401 9.7e-45 184.5 122 77.0
AUR62033386 Chenopodium quinoa HOM05D004437 ORTHO05D005401 2.8e-44 183.0 160 61.9
EL10Ac1g00948 Beta vulgaris HOM05D004437 ORTHO05D005401 8.2e-44 181.4 123 73.2
Ah.12g057860 Amaranthus hybridus HOM05D004437 ORTHO05D005401 1.1e-43 181.0 125 72.0
Zm00001eb230470 Zea mays HOM05D004437 ORTHO05D005401 3.1e-43 179.5 131 72.5
BcaC01g05120 Brassica carinata HOM05D004437 ORTHO05D005401 5.3e-43 178.7 118 71.2
Cpa.g.sc18.165 Carica papaya HOM05D004437 ORTHO05D005401 5.3e-43 178.7 93 90.3
BcaC02g12196 Brassica carinata HOM05D004437 ORTHO05D005401 4.5e-42 175.6 102 80.4
Sabra03G0083300 Salix brachista HOM05D004437 ORTHO05D005401 1.7e-41 173.7 105 82.9
FAN18G0922 Fragaria x ananassa HOM05D004437 ORTHO05D005401 2.9e-41 172.9 105 79.0
MD00G1131900 Malus domestica HOM05D004437 ORTHO05D005401 3.8e-41 172.6 155 58.1
DCAR_006889 Daucus carota HOM05D004437 ORTHO05D005401 6.5e-41 171.8 124 71.8
FAN06G3102 Fragaria x ananassa HOM05D004437 ORTHO05D005401 6.5e-41 171.8 130 69.2
FAN01G2781 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.5e-40 170.6 131 69.5
FAN06G0648 Fragaria x ananassa HOM05D004437 ORTHO05D005401 1.5e-40 170.6 131 69.5
Aa31LG1G27110 Aethionema arabicum HOM05D004437 ORTHO05D005401 4.2e-40 169.1 99 82.8
HPP92_025880 Vanilla planifolia HOM05D004437 ORTHO05D005401 2.7e-39 166.4 95 84.2
Sabra01G0086400 Salix brachista HOM05D004437 ORTHO05D005401 3.0e-38 162.9 127 68.5
Sed0003115 Sechium edule HOM05D004437 ORTHO05D005401 2.6e-37 159.8 91 81.3
SHI32178 Sapria himalayana HOM05D004437 ORTHO05D005401 1.3e-36 157.5 115 67.8
TPR.G14692 Trifolium pratense HOM05D004437 ORTHO05D005401 1.7e-36 157.1 137 63.5
Cre09.g404400 Chlamydomonas reinhardtii HOM05D004437 ORTHO05D005401 1.2e-34 151.0 128 60.2
Lj9A574G30 Lonicera japonica HOM05D000186 ORTHO05D001124 4.2e-32 142.5 107 69.2
CDE04G2772 Ceratophyllum demersum HOM05D004437 ORTHO05D005401 2.7e-31 139.8 76 93.4
EL10Ac5g12685 Beta vulgaris HOM05D004437 ORTHO05D005401 3.0e-30 136.3 133 55.6
Oeu058600.1 Olea europaea HOM05D004437 ORTHO05D005401 1.6e-23 114.0 74 81.1
Glyma.07G081500 Glycine max HOM05D004437 ORTHO05D005401 2.8e-23 113.2 58 91.4
Haze_26096 Corylus avellana HOM05D004437 ORTHO05D005401 3.6e-23 112.8 120 48.3
CAN.G126.10 Capsicum annuum HOM05D004437 ORTHO05D005401 6.1e-23 112.1 64 81.2
Haze_16715 Corylus avellana HOM05D004437 ORTHO05D005401 3.0e-22 109.8 54 90.7
Actinidia31448 Actinidia chinensis HOM05D004437 ORTHO05D005401 6.8e-22 108.6 93 64.5
C03p30120 Brassica napus HOM05D004437 ORTHO05D005401 2.0e-21 107.1 75 68.0
Zm00001eb230390 Zea mays HOM05D004437 ORTHO05D004372 3.4e-21 106.3 59 81.4
BolC3t15361H Brassica oleracea HOM05D004437 ORTHO05D005401 1.7e-20 104.0 75 66.7
BraA03t11727Z Brassica rapa HOM05D004437 ORTHO05D005401 2.2e-20 103.6 75 66.7
Glyma.20G186451 Glycine max HOM05D004437 ORTHO05D005401 3.7e-20 102.8 60 85.0
A03p25260 Brassica napus HOM05D004437 ORTHO05D005401 3.6e-15 86.3 64 65.6
DCAR_008576 Daucus carota HOM05D004437 ORTHO05D005401 7.5e-13 78.6 121 40.5
Atru.ctg1434.8 Acer truncatum HOM05D004437 ORTHO05D037942 2.2e-12 77.0 132 35.6
Cfa022890 Carpinus fangiana HOM05D004437 ORTHO05D037942 2.7e-10 70.1 151 31.1
BcaC09g48983 Brassica carinata HOM05D004437 ORTHO05D005401 2.3e-09 67.0 39 76.9


User provided reference genes

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