Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D02293 Eucalyptus grandis HOM05D005648 ORTHO05D007357 9.1e-134 480.3 259 100.0
PGR031G0771 Punica granatum HOM05D005648 ORTHO05D007357 2.3e-76 289.7 254 60.2
Prupe.2G170800 Prunus persica HOM05D005648 ORTHO05D007357 2.5e-75 286.2 255 61.6
QL08p048767 Quercus lobata HOM05D005648 ORTHO05D007357 2.0e-72 276.6 253 61.3
COL.COLO4_12714 Corchorus olitorius HOM05D005648 ORTHO05D007357 1.1e-70 270.8 252 58.3
Potri.014G084800 Populus trichocarpa HOM05D005648 ORTHO05D007357 3.5e-69 265.8 253 56.5
FvH4_7g14300 Fragaria vesca HOM05D005648 ORTHO05D007357 6.0e-69 265.0 253 59.7
FAN10G1032 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.1e-67 260.8 253 59.3
Haze_07444 Corylus avellana HOM05D005648 ORTHO05D007357 1.9e-67 260.0 252 58.7
Thecc.01G358800 Theobroma cacao HOM05D005648 ORTHO05D007357 2.5e-67 259.6 248 57.3
FAN06G4900 Fragaria x ananassa HOM05D005648 ORTHO05D007357 3.3e-67 259.2 253 58.5
RcHm_v2.0_Chr1g0355291 Rosa chinensis HOM05D005648 ORTHO05D007357 3.3e-67 259.2 253 58.9
FAN06G1011 Fragaria x ananassa HOM05D005648 ORTHO05D007357 9.6e-67 257.7 253 58.9
Sabra14G0061500 Salix brachista HOM05D005648 ORTHO05D007357 9.6e-67 257.7 262 54.2
MD07G1136800 Malus domestica HOM05D005648 ORTHO05D007357 3.7e-66 255.8 257 57.2
MD01G1061000 Malus domestica HOM05D005648 ORTHO05D007357 6.2e-66 255.0 255 56.9
Manes.05G034000 Manihot esculenta HOM05D005648 ORTHO05D007357 8.2e-66 254.6 252 57.9
Atru.chr5.500 Acer truncatum HOM05D005648 ORTHO05D007357 1.1e-65 254.2 253 55.7
Potri.002G160100 Populus trichocarpa HOM05D005648 ORTHO05D007357 1.4e-65 253.8 258 53.9
Gorai.004G158700 Gossypium raimondii HOM05D005648 ORTHO05D007357 1.8e-65 253.4 255 54.1
FAN01G1827 Fragaria x ananassa HOM05D005648 ORTHO05D007357 2.4e-65 253.1 253 58.5
Gohir.D08G152800 Gossypium hirsutum HOM05D005648 ORTHO05D007357 2.4e-65 253.1 255 53.7
Gohir.A08G131300 Gossypium hirsutum HOM05D005648 ORTHO05D007357 5.3e-65 251.9 255 53.3
Duzib133G0061 Durio zibethinus HOM05D005648 ORTHO05D007357 2.6e-64 249.6 260 56.2
Manes.01G256501 Manihot esculenta HOM05D005648 ORTHO05D007357 4.5e-64 248.8 252 57.1
Oeu010615.1 Olea europaea HOM05D005648 ORTHO05D007357 4.5e-64 248.8 266 53.0
Cpa.g.sc11.6 Carica papaya HOM05D005648 ORTHO05D007357 1.0e-63 247.7 264 52.7
Ciclev10024354m.g Citrus clementina HOM05D005648 ORTHO05D007357 3.8e-63 245.7 253 57.7
TWI23G0553 Tripterygium wilfordii HOM05D005648 ORTHO05D007357 4.6e-61 238.8 253 54.5
TAR629G3222 Trochodendron aralioides HOM05D005648 ORTHO05D007357 4.6e-61 238.8 288 51.4
Glyma.07G070400 Glycine max HOM05D005648 ORTHO05D007357 1.5e-59 233.8 255 55.3
MBI18_g45368_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.5e-59 233.0 260 53.5
Phvul.010G099300 Phaseolus vulgaris HOM05D005648 ORTHO05D007357 7.4e-59 231.5 255 54.1
Lj3g0021061 Lotus japonicus HOM05D005648 ORTHO05D007357 1.6e-58 230.3 254 55.5
Carub.0001s0053 Capsella rubella HOM05D005648 ORTHO05D007357 3.7e-58 229.2 254 50.8
Nn1g01539 Nelumbo nucifera HOM05D005648 ORTHO05D007357 6.3e-58 228.4 258 52.7
Psat4g155800 Pisum sativum HOM05D005648 ORTHO05D007357 1.4e-57 227.3 256 53.9
AL1G10680 Arabidopsis lyrata HOM05D005648 ORTHO05D007357 2.4e-57 226.5 256 51.2
Rhsim01G0157500 Rhododendron simsii HOM05D005648 ORTHO05D007357 9.0e-57 224.6 261 49.4
VMungo0331G0956 Vigna mungo HOM05D005648 ORTHO05D007357 1.2e-56 224.2 255 53.7
Cfa019074 Carpinus fangiana HOM05D005648 ORTHO05D007357 2.0e-56 223.4 252 53.2
Migut.B01757 Erythranthe guttata HOM05D005648 ORTHO05D007357 2.6e-56 223.0 265 49.1
Sed0027842 Sechium edule HOM05D005648 ORTHO05D007357 3.4e-56 222.6 258 48.8
HanXRQChr16g0522761 Helianthus annuus HOM05D005648 ORTHO05D007357 7.7e-56 221.5 264 52.3
GSVIVG01026935001 Vitis vinifera HOM05D005648 ORTHO05D007357 1.0e-55 221.1 205 60.5
Thhalv10007771m.g Eutrema salsugineum HOM05D005648 ORTHO05D007357 1.3e-55 220.7 255 50.2
Lsat_1_v5_gn_4_36080 Lactuca sativa HOM05D005648 ORTHO05D007357 2.2e-55 219.9 275 50.2
AT1G01690 Arabidopsis thaliana HOM05D005648 ORTHO05D007357 2.9e-55 219.5 258 50.8
Sp1g00620 Schrenkiella parvula HOM05D005648 ORTHO05D007357 5.0e-55 218.8 253 49.0
Dinv32486 Davidia involucrata HOM05D005648 ORTHO05D007357 1.1e-54 217.6 259 51.7
Aqoxy7G00304 Aquilegia oxysepala HOM05D005648 ORTHO05D007357 2.5e-54 216.5 268 49.3
Actinidia12702 Actinidia chinensis HOM05D005648 ORTHO05D007357 4.2e-54 215.7 261 48.3
MSTRG.20835 Avicennia marina HOM05D005648 ORTHO05D007357 7.2e-54 214.9 264 49.6
Duzib133G1405 Durio zibethinus HOM05D005648 ORTHO05D007357 9.4e-54 214.5 230 54.3
TAR375G0141 Trochodendron aralioides HOM05D005648 ORTHO05D007357 9.4e-54 214.5 259 50.2
FAN03G1082 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.6e-53 213.8 212 59.4
Aa31LG1G11030 Aethionema arabicum HOM05D005648 ORTHO05D007357 4.6e-53 212.2 263 47.9
THA.LOC104825838 Tarenaya hassleriana HOM05D005648 ORTHO05D007357 7.9e-53 211.5 254 46.1
Solyc01g094650.4 Solanum lycopersicum HOM05D005648 ORTHO05D007357 1.8e-52 210.3 261 46.0
CiPaw.11G030900 Carya illinoinensis HOM05D005648 ORTHO05D007357 3.0e-52 209.5 252 50.0
Medtr8g030730 Medicago truncatula HOM05D005648 ORTHO05D007357 3.0e-52 209.5 278 47.8
TPR.G10304 Trifolium pratense HOM05D005648 ORTHO05D007357 6.7e-52 208.4 224 54.0
Sopen01g038460 Solanum pennellii HOM05D005648 ORTHO05D007357 1.5e-51 207.2 261 45.6
CARHR000670 Cardamine hirsuta HOM05D005648 ORTHO05D007357 2.2e-50 203.4 256 48.4
DCAR_006931 Daucus carota HOM05D005648 ORTHO05D007357 2.2e-50 203.4 246 50.8
arahy.Tifrunner.gnm1.ann1.B5LD0B Arachis hypogaea HOM05D005648 ORTHO05D007357 4.8e-50 202.2 253 50.2
Glyma.03G008900 Glycine max HOM05D005648 ORTHO05D007357 6.3e-50 201.8 226 53.5
Lalb_Chr10g0096911 Lupinus albus HOM05D005648 ORTHO05D007357 2.4e-49 199.9 269 48.7
SGA_v2.0_scaffold4G02313 Striga asiatica HOM05D005648 ORTHO05D007357 3.1e-49 199.5 261 48.7
Cc02_g38050 Coffea canephora HOM05D005648 ORTHO05D007357 4.1e-49 199.1 204 57.8
CAN.G78.81 Capsicum annuum HOM05D005648 ORTHO05D007357 6.9e-49 198.4 261 43.7
MELO3C006108.2 Cucumis melo HOM05D005648 ORTHO05D007357 1.5e-48 197.2 253 46.6
A06p44840 Brassica napus HOM05D005648 ORTHO05D007357 2.6e-48 196.4 260 46.2
Dinv43819 Davidia involucrata HOM05D005648 ORTHO05D007357 3.4e-48 196.1 195 57.4
MBI18_g44363_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.4e-48 196.1 249 49.8
arahy.Tifrunner.gnm1.ann1.SJPY5G Arachis hypogaea HOM05D005648 ORTHO05D007357 5.9e-48 195.3 234 51.7
Peaxi162Scf00020g00424 Petunia axillaris HOM05D005648 ORTHO05D007357 5.9e-48 195.3 311 41.8
AUR62004360 Chenopodium quinoa HOM05D005648 ORTHO05D007357 1.7e-47 193.7 262 43.1
Lalb_Chr17g0339581 Lupinus albus HOM05D005648 ORTHO05D007357 2.2e-47 193.4 271 48.3
HPP92_008491 Vanilla planifolia HOM05D005648 ORTHO05D007357 1.9e-46 190.3 259 42.1
BraA06t27356Z Brassica rapa HOM05D005648 ORTHO05D007357 2.5e-46 189.9 261 46.0
Actinidia33418 Actinidia chinensis HOM05D005648 ORTHO05D007357 5.5e-46 188.7 215 51.6
C07p31360 Brassica napus HOM05D005648 ORTHO05D008650 2.7e-45 186.4 268 42.9
arahy.Tifrunner.gnm1.ann1.79VNNQ Arachis hypogaea HOM05D005648 ORTHO05D007357 6.1e-45 185.3 259 46.3
BolC7t43677H Brassica oleracea HOM05D005648 ORTHO05D007357 8.8e-44 181.4 269 42.8
Ca_23631_v3 Cicer arietinum L. HOM05D005648 ORTHO05D007357 2.0e-43 180.3 249 47.8
ECA234G0615 Erigeron canadensis HOM05D005648 ORTHO05D007357 3.3e-43 179.5 257 46.3
BcaC06g34230 Brassica carinata HOM05D005648 ORTHO05D007357 4.4e-43 179.1 266 42.5
A10p00320 Brassica napus HOM05D003351 ORTHO05D003806 1.7e-42 177.2 251 44.2
ATR0680G381 Amborella trichopoda HOM05D005648 ORTHO05D007357 2.8e-42 176.4 268 41.4
Sc23g0002870 Simmondsia chinensis HOM05D005648 ORTHO05D007357 3.7e-42 176.0 270 42.2
Nitab4.5_0006762g0020 Nicotiana tabacum HOM05D005648 ORTHO05D007357 2.4e-41 173.3 252 42.1
BraA10t42311Z Brassica rapa HOM05D005648 ORTHO05D007357 1.5e-40 170.6 252 43.7
EL10Ac7g16797 Beta vulgaris HOM05D005648 ORTHO05D007357 5.9e-40 168.7 185 51.4
ClCG05G001510 Citrullus lanatus HOM05D005648 ORTHO05D007357 5.9e-40 168.7 243 43.2
PSO478G0111 Papaver somniferum HOM05D005648 ORTHO05D007357 1.1e-38 164.5 257 40.9
Rhsim01G0157000 Rhododendron simsii HOM05D005648 ORTHO05D007357 4.2e-38 162.5 231 41.6
CsaV3_3G008890 Cucumis sativus L. HOM05D003539 ORTHO05D004111 7.2e-38 161.8 236 42.8
PGSC0003DMG400000173 Solanum tuberosum HOM05D005648 ORTHO05D007357 3.6e-37 159.5 195 48.2
Nitab4.5_0000583g0110 Nicotiana tabacum HOM05D005648 ORTHO05D007357 4.7e-37 159.1 216 43.5
C05p00330 Brassica napus HOM05D003351 ORTHO05D003806 8.0e-37 158.3 251 41.4
BolC5t28826H Brassica oleracea HOM05D005648 ORTHO05D007357 3.9e-36 156.0 252 41.3
CDE04G3514 Ceratophyllum demersum HOM05D005648 ORTHO05D007357 7.4e-35 151.8 258 41.1
Peaxi162Scf00020g00041 Petunia axillaris HOM05D005648 ORTHO05D007357 3.1e-33 146.4 221 43.0
Ah.05g180590 Amaranthus hybridus HOM05D005648 ORTHO05D007357 2.2e-31 140.2 214 43.5
unitig_26.g9738 Utricularia gibba HOM05D005648 ORTHO05D007357 2.7e-29 133.3 284 35.9
Zm00001eb404350 Zea mays HOM05D005648 ORTHO05D007357 2.7e-29 133.3 281 38.4
BcaC06g31348 Brassica carinata HOM05D005648 ORTHO05D007357 1.0e-28 131.3 259 37.1
Zm00001eb000540 Zea mays HOM05D005648 ORTHO05D007357 2.8e-26 123.2 277 36.5
vmacro20940 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 9.1e-25 118.2 144 50.0
Os03g0106300 Oryza sativa ssp. japonica HOM05D005648 ORTHO05D007357 1.7e-23 114.0 266 36.5
QL08p048682 Quercus lobata HOM05D005648 ORTHO05D007357 2.2e-23 113.6 110 58.2
SHI13451 Sapria himalayana HOM05D005648 ORTHO05D007357 1.6e-21 107.5 116 47.4
AUR62022570 Chenopodium quinoa HOM05D005648 ORTHO05D007357 8.0e-21 105.1 111 48.6
arahy.Tifrunner.gnm1.ann1.QHU48Z Arachis hypogaea HOM05D005648 ORTHO05D007357 5.2e-20 102.4 123 47.2
MBI06_g29680_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.2e-18 97.1 130 47.7
MBI01_g12685_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D007357 3.8e-15 86.3 91 50.5
CSS0016999 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 5.0e-15 85.9 79 64.6
FAN10G0802 Fragaria x ananassa HOM05D005648 ORTHO05D007357 1.2e-13 81.3 67 68.7
MBI18_g42710_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 1.6e-13 80.9 74 54.1
SalBow3G1978 Salvia bowleyana HOM05D005648 ORTHO05D007357 1.6e-13 80.9 82 59.8
CSS0007131 Camellia sinensis var. sinensis HOM05D005648 ORTHO05D007357 2.8e-13 80.1 180 32.2
SHI13452 Sapria himalayana HOM05D005648 ORTHO05D007357 2.8e-13 80.1 100 53.0
MBI17_g41096_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 3.0e-12 76.6 68 55.9
MBI18_g40590_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 4.0e-12 76.3 73 54.8
BcaB03g13607 Brassica carinata HOM05D003351 ORTHO05D003806 3.4e-11 73.2 176 36.4
MBI06_g27427_MAGBIO Magnolia biondii HOM05D005648 ORTHO05D007357 2.4e-09 67.0 71 52.1
MBI19_g11759_MAGBIO Magnolia biondii HOM05D000532 ORTHO05D002414 4.1e-09 66.2 74 48.6
vmacro20941 Vaccinium macrocarpon HOM05D005648 ORTHO05D007357 7.3e-06 55.5 82 36.6


User provided reference genes

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