Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 8.1e-73 276.9 137 100.0
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 2.9e-54 215.3 140 70.7
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 7.1e-53 210.7 143 67.8
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 1.2e-52 209.9 136 68.4
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 4.6e-52 208.0 139 68.3
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 6.0e-52 207.6 137 67.2
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 1.0e-51 206.8 154 63.6
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 2.3e-51 205.7 137 71.5
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 3.0e-51 205.3 140 72.9
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 3.9e-51 204.9 142 64.1
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 1.5e-50 203.0 142 63.4
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 1.5e-50 203.0 137 68.6
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 2.5e-50 202.2 139 66.9
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 9.7e-50 200.3 140 65.0
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 1.6e-49 199.5 139 64.7
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 1.6e-49 199.5 139 64.7
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 1.6e-49 199.5 144 63.2
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 65.0
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 66.4
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 66.4
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 66.4
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 66.4
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 2.2e-49 199.1 137 66.4
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 2.2e-49 199.1 140 67.1
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.8e-49 198.7 103 80.6
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 2.8e-49 198.7 137 66.4
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 2.8e-49 198.7 137 68.6
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 3.7e-49 198.4 102 80.4
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 3.7e-49 198.4 139 63.3
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 4.8e-49 198.0 143 64.3
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 8.2e-49 197.2 137 66.4
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 8.2e-49 197.2 137 65.7
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 1.8e-48 196.1 138 63.8
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.8e-48 196.1 142 64.8
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.8e-48 196.1 142 64.8
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 2.4e-48 195.7 137 62.8
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.1e-48 195.3 142 61.3
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 3.1e-48 195.3 139 64.0
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 4.1e-48 194.9 103 79.6
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 4.1e-48 194.9 140 62.9
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 5.3e-48 194.5 137 69.3
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 9.0e-48 193.7 102 73.5
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 9.0e-48 193.7 155 56.1
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 1.2e-47 193.4 137 65.7
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.2e-47 193.4 137 59.1
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.5e-47 193.0 137 64.2
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.5e-47 193.0 152 57.9
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 2.6e-47 192.2 148 58.8
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 2.6e-47 192.2 132 63.6
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 2.6e-47 192.2 137 64.2
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 3.4e-47 191.8 139 66.2
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 3.4e-47 191.8 137 62.8
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 3.4e-47 191.8 102 75.5
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 4.5e-47 191.4 140 68.6
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 4.5e-47 191.4 140 68.6
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 4.5e-47 191.4 143 60.8
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 7.7e-47 190.7 143 65.0
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 7.7e-47 190.7 138 62.3
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 1.0e-46 190.3 138 67.4
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 1.0e-46 190.3 143 67.1
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.7e-46 189.5 102 71.6
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.9e-46 188.7 103 75.7
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 3.8e-46 188.3 138 61.6
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.1e-45 186.8 137 62.0
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.4e-45 186.4 145 61.4
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 1.9e-45 186.0 142 59.2
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 5.5e-45 184.5 133 63.9
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 7.2e-45 184.1 137 62.0
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 9.4e-45 183.7 102 72.5
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 1.2e-44 183.3 95 77.9
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 1.2e-44 183.3 137 62.8
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.2e-44 183.3 139 61.9
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.2e-44 183.3 137 64.2
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 1.6e-44 183.0 157 60.5
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.6e-44 183.0 135 60.0
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 7.9e-44 180.6 142 61.3
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 7.9e-44 180.6 103 69.9
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.0e-43 180.3 91 80.2
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 1.4e-43 179.9 103 69.9
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.3e-43 179.1 142 61.3
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 3.0e-43 178.7 157 56.7
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 3.9e-43 178.3 127 61.4
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 5.1e-43 177.9 137 59.1
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.3e-42 174.9 149 57.0
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 4.3e-42 174.9 138 55.8
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 1.7e-41 172.9 98 74.5
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 2.8e-41 172.2 110 70.0
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 6.3e-41 171.0 173 48.6
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 8.2e-41 170.6 182 47.8
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.4e-40 169.9 173 48.6
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 2.4e-40 169.1 103 70.9
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.4e-40 169.1 141 59.6
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 3.1e-40 168.7 103 62.1
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 9.1e-40 167.2 151 51.7
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 3.4e-39 165.2 78 88.5
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 5.9e-39 164.5 95 68.4
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 5.9e-39 164.5 142 54.9
Peaxi162Scf00736g00313 Petunia axillaris HOM05D006296 ORTHO05D007777 5.5e-37 157.9 103 68.9
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 7.2e-37 157.5 119 52.1
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 7.9e-36 154.1 117 61.5
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 1.1e-34 150.2 78 74.4
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 2.6e-34 149.1 124 59.7
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 3.3e-34 148.7 117 56.4
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.1e-32 143.7 90 70.0
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 1.5e-31 139.8 116 56.9
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 5.9e-31 137.9 77 75.3
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 1.3e-30 136.7 149 47.7
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.1e-24 117.1 60 81.7
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 98 56.1
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 1.1e-24 117.1 98 56.1
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 7.0e-24 114.4 94 58.5
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 7.0e-24 114.4 94 58.5
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 7.0e-24 114.4 102 56.9
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 1.3e-22 110.2 88 61.4
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 8.5e-22 107.5 98 55.1
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 1.1e-21 107.1 97 54.6
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 5.5e-21 104.8 93 46.2
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 4.8e-17 91.7 98 45.9
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 5.9e-15 84.7 53 62.3
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 3.0e-11 72.4 38 78.9
PGSC0003DMG400022813 Solanum tuberosum HOM05D006296 ORTHO05D007777 1.7e-06 56.6 65 53.8


User provided reference genes

Program Settings