Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.D00251 Eucalyptus grandis HOM05D004333 ORTHO05D005363 0.0e+00 1594.7 801 100.0
QL11p010725 Quercus lobata HOM05D004333 ORTHO05D005363 1.2e-248 863.6 801 55.9
Haze_00260 Corylus avellana HOM05D004333 ORTHO05D005363 5.2e-236 821.6 801 53.8
Cfa016195 Carpinus fangiana HOM05D004333 ORTHO05D005363 5.7e-235 818.1 801 53.4
CiPaw.05G200800 Carya illinoinensis HOM05D004333 ORTHO05D005363 1.8e-233 813.1 799 53.8
RcHm_v2.0_Chr1g0381961 Rosa chinensis HOM05D004333 ORTHO05D005363 4.1e-233 812.0 801 51.7
Duzib068G0008 Durio zibethinus HOM05D004333 ORTHO05D005363 8.5e-231 804.3 798 52.1
Manes.01G037200 Manihot esculenta HOM05D004333 ORTHO05D005363 1.6e-229 800.0 799 51.6
Dinv32109 Davidia involucrata HOM05D004333 ORTHO05D005363 5.2e-228 795.0 809 52.4
FAN10G1078 Fragaria x ananassa HOM05D004333 ORTHO05D005363 6.8e-228 794.7 801 50.3
Cpa.g.c29767.1 Carica papaya HOM05D004333 ORTHO05D005363 8.8e-228 794.3 801 52.1
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 3.7e-226 788.9 800 51.6
PGR142G3828 Punica granatum HOM05D004333 ORTHO05D005363 8.3e-226 787.7 785 53.4
FAN03G1314 Fragaria x ananassa HOM05D004333 ORTHO05D005363 2.4e-225 786.2 801 49.8
Prupe.2G315300 Prunus persica HOM05D004333 ORTHO05D005363 3.1e-225 785.8 803 52.8
Ciclev10000006m.g Citrus clementina HOM05D004333 ORTHO05D005363 4.1e-225 785.4 797 51.8
Sabra12G0012900 Salix brachista HOM05D004333 ORTHO05D005363 4.1e-225 785.4 804 50.9
Potri.012G020000 Populus trichocarpa HOM05D004333 ORTHO05D005363 5.4e-225 785.0 801 51.2
Thecc.03G204400 Theobroma cacao HOM05D004333 ORTHO05D005363 2.0e-224 783.1 799 52.1
FvH4_7g32380 Fragaria vesca HOM05D004333 ORTHO05D005363 7.7e-224 781.2 801 49.8
Potri.015G008500 Populus trichocarpa HOM05D004333 ORTHO05D005363 1.0e-223 780.8 802 50.6
TWI39G1232 Tripterygium wilfordii HOM05D004333 ORTHO05D005363 1.3e-223 780.4 798 50.3
FAN06G4186 Fragaria x ananassa HOM05D004333 ORTHO05D005363 2.3e-223 779.6 801 49.8
FAN10G0319 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.5e-222 776.9 801 49.4
Sabra15G0006500 Salix brachista HOM05D004333 ORTHO05D005363 4.0e-220 768.8 802 50.0
MD07G1295800 Malus domestica HOM05D004333 ORTHO05D005363 1.5e-219 766.9 803 51.7
Gohir.D12G248500 Gossypium hirsutum HOM05D004333 ORTHO05D005363 7.5e-219 764.6 799 50.8
Gorai.008G266500 Gossypium raimondii HOM05D004333 ORTHO05D005363 7.5e-219 764.6 799 50.9
Lj1g0003347 Lotus japonicus HOM05D004333 ORTHO05D005363 5.4e-217 758.4 799 50.3
TAR633G0098 Trochodendron aralioides HOM05D004333 ORTHO05D005363 5.4e-217 758.4 796 51.4
MD01G1225300 Malus domestica HOM05D004333 ORTHO05D005363 1.6e-216 756.9 804 50.9
Medtr3g091940 Medicago truncatula HOM05D004333 ORTHO05D005363 1.5e-214 750.4 798 49.4
Gohir.A12G247800 Gossypium hirsutum HOM05D004333 ORTHO05D005363 2.5e-214 749.6 799 49.9
Phvul.009G048100 Phaseolus vulgaris HOM05D004333 ORTHO05D005363 3.3e-214 749.2 800 49.8
Ca_16734_v3 Cicer arietinum L. HOM05D004333 ORTHO05D005363 7.3e-214 748.0 800 49.2
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea HOM05D004333 ORTHO05D005363 2.1e-213 746.5 802 48.6
Glyma.04G232700 Glycine max HOM05D004333 ORTHO05D005363 4.7e-213 745.3 799 48.9
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea HOM05D004333 ORTHO05D005363 2.3e-212 743.0 802 48.3
TPR.G33633 Trifolium pratense HOM05D004333 ORTHO05D005363 2.0e-211 740.0 799 48.7
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 5.8e-211 738.4 799 49.2
Lalb_Chr08g0240011 Lupinus albus HOM05D004333 ORTHO05D005363 7.5e-211 738.0 801 48.2
Glyma.06G132300 Glycine max HOM05D004333 ORTHO05D005363 2.9e-210 736.1 799 48.4
CANSAT21G1061 Cannabis sativa HOM05D004333 ORTHO05D005363 3.2e-209 732.6 800 48.2
vmacro06413 Vaccinium macrocarpon HOM05D004333 ORTHO05D005363 1.2e-208 730.7 808 48.3
Lj1C1024G7 Lonicera japonica HOM05D004333 ORTHO05D005363 6.2e-205 718.4 812 48.6
Actinidia08674 Actinidia chinensis HOM05D004333 ORTHO05D005363 1.5e-203 713.8 809 48.1
Sed0018682 Sechium edule HOM05D004333 ORTHO05D005363 1.4e-201 707.2 799 46.6
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 1.0e-199 701.0 772 48.4
Nn7g38041 Nelumbo nucifera HOM05D004333 ORTHO05D005363 1.5e-198 697.2 809 45.9
GSVIVG01038603001 Vitis vinifera HOM05D004333 ORTHO05D005363 1.1e-190 671.0 695 49.6
ClCG03G011440 Citrullus lanatus HOM05D004333 ORTHO05D005363 4.3e-190 669.1 805 45.7
CSS0015753 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 9.6e-190 667.9 810 45.6
CSS0025528 Camellia sinensis var. sinensis HOM05D004333 ORTHO05D005363 1.6e-189 667.2 810 45.4
MELO3C010103.2 Cucumis melo HOM05D004333 ORTHO05D005363 2.1e-189 666.8 784 46.2
DCAR_020346 Daucus carota HOM05D004333 ORTHO05D005363 4.7e-189 665.6 815 45.5
CsaV3_1G044960 Cucumis sativus L. HOM05D004333 ORTHO05D005363 1.2e-184 651.0 786 45.5
CARHR189090 Cardamine hirsuta HOM05D004333 ORTHO05D005363 1.7e-183 647.1 807 45.1
Carub.0006s2218 Capsella rubella HOM05D004333 ORTHO05D005363 3.0e-183 646.4 800 44.5
AT5G24350 Arabidopsis thaliana HOM05D004333 ORTHO05D005363 7.3e-182 641.7 806 44.8
AL6G35880 Arabidopsis lyrata HOM05D004333 ORTHO05D005363 2.1e-181 640.2 807 45.0
Hund21026 Selenicereus undatus HOM05D004333 ORTHO05D005363 2.0e-179 633.6 807 44.6
Peaxi162Scf00740g00426 Petunia axillaris HOM05D004333 ORTHO05D005363 1.3e-178 630.9 810 43.3
Sp2g22970 Schrenkiella parvula HOM05D004333 ORTHO05D005363 1.3e-178 630.9 803 45.2
Sc19g0000760 Simmondsia chinensis HOM05D004333 ORTHO05D005363 1.1e-177 627.9 808 43.3
Sopen03g022440 Solanum pennellii HOM05D004333 ORTHO05D005363 1.1e-177 627.9 810 43.0
Nitab4.5_0010367g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 4.2e-177 625.9 809 42.8
Cc02_g01170 Coffea canephora HOM05D004333 ORTHO05D005363 2.1e-176 623.6 808 43.7
THA.LOC104798907 Tarenaya hassleriana HOM05D004333 ORTHO05D005363 1.8e-175 620.5 812 44.6
Solyc03g082680.4 Solanum lycopersicum HOM05D004333 ORTHO05D005363 3.9e-175 619.4 809 42.6
CAN.G481.60 Capsicum annuum HOM05D004333 ORTHO05D005363 5.1e-175 619.0 810 43.1
Aqoxy5G04259 Aquilegia oxysepala HOM05D004333 ORTHO05D005363 1.1e-174 617.8 809 44.1
FAN01G1860 Fragaria x ananassa HOM05D004333 ORTHO05D005363 1.3e-173 614.4 801 42.1
EL10Ac9g21652 Beta vulgaris HOM05D004333 ORTHO05D005363 3.6e-173 612.8 786 43.4
FAN20G1934 Fragaria x ananassa HOM05D004333 ORTHO05D005363 4.8e-173 612.5 801 42.1
Aa31LG11G3630 Aethionema arabicum HOM05D004333 ORTHO05D005363 6.2e-173 612.1 773 44.8
C07p43390 Brassica napus HOM05D004333 ORTHO05D005363 6.2e-173 612.1 807 44.7
BolC7t44866H Brassica oleracea HOM05D004333 ORTHO05D005363 6.2e-173 612.1 807 44.7
Migut.F00177 Erythranthe guttata HOM05D004333 ORTHO05D005363 3.1e-172 609.8 810 43.2
BraA06t26437Z Brassica rapa HOM05D004333 ORTHO05D005363 2.6e-171 606.7 807 44.1
A06p35170 Brassica napus HOM05D004333 ORTHO05D005363 3.4e-171 606.3 807 44.1
Thhalv10003502m.g Eutrema salsugineum HOM05D004333 ORTHO05D005363 7.6e-171 605.1 805 43.5
Ah.01g018970 Amaranthus hybridus HOM05D004333 ORTHO05D005363 1.3e-170 604.4 789 42.6
Nitab4.5_0008197g0020 Nicotiana tabacum HOM05D004333 ORTHO05D005363 2.2e-170 603.6 809 41.8
BcaNung01227 Brassica carinata HOM05D004333 ORTHO05D005363 6.0e-168 595.5 764 44.8
AUR62010404 Chenopodium quinoa HOM05D004333 ORTHO05D005363 1.6e-165 587.4 793 43.3
MSTRG.27005 Avicennia marina HOM05D004333 ORTHO05D005363 3.4e-163 579.7 810 40.7
HanXRQChr04g0107121 Helianthus annuus HOM05D004333 ORTHO05D005363 1.0e-162 578.2 819 40.9
SGA_v2.0_scaffold18G08437 Striga asiatica HOM05D004333 ORTHO05D005363 2.5e-161 573.5 788 42.4
PSO063G3257 Papaver somniferum HOM05D004333 ORTHO05D005363 3.9e-159 566.2 790 40.0
MBI06_g06689_MAGBIO Magnolia biondii HOM05D004333 ORTHO05D005363 2.5e-158 563.5 785 41.7
AUR62016813 Chenopodium quinoa HOM05D004333 ORTHO05D005363 7.4e-158 562.0 793 41.9
Lsat_1_v5_gn_9_49400 Lactuca sativa HOM05D004333 ORTHO05D005363 2.1e-157 560.5 809 40.5
CAN.G481.57 Capsicum annuum HOM05D004333 ORTHO05D005363 9.3e-153 545.0 808 40.2
CDE02G3740 Ceratophyllum demersum HOM05D004333 ORTHO05D005363 4.4e-142 509.6 761 37.6
Atru.chr12.2311 Acer truncatum HOM05D004333 ORTHO05D005363 1.1e-140 505.0 470 55.7
unitig_0.g2452 Utricularia gibba HOM05D004333 ORTHO05D005363 8.5e-138 495.4 796 37.8
SHI08278 Sapria himalayana HOM05D004333 ORTHO05D005363 2.8e-133 480.3 780 36.8
ATR0697G293 Amborella trichopoda HOM05D004333 ORTHO05D005363 5.3e-132 476.1 802 36.9
ECA232G2446 Erigeron canadensis HOM05D004333 ORTHO05D005363 5.5e-121 439.5 654 38.8
Zm00001eb359130 Zea mays HOM05D004333 ORTHO05D005363 1.7e-117 427.9 778 36.4
Actinidia34249 Actinidia chinensis HOM05D004333 ORTHO05D005363 9.2e-76 289.3 314 49.7
Os12g0233600 Oryza sativa ssp. japonica HOM05D004333 ORTHO05D005363 3.2e-60 237.7 432 35.6
SEGI_24760 Sequoiadendron giganteum HOM05D004333 ORTHO05D005363 1.4e-52 212.2 516 30.0
Nitab4.5_0004178g0060 Nicotiana tabacum HOM05D004333 ORTHO05D005363 7.4e-49 199.9 341 34.6
Psat5g074840 Pisum sativum HOM05D004333 ORTHO05D005363 1.8e-47 195.3 199 47.2
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis HOM05D004333 ORTHO05D005363 2.6e-46 191.4 817 23.4
Mapoly0143s0007 Marchantia polymorpha HOM05D004333 ORTHO05D005363 6.7e-42 176.8 568 26.8
Pp3c1_3140 Physcomitrium patens HOM05D004333 ORTHO05D005363 3.8e-37 161.0 785 23.6
Psat1g100720 Pisum sativum HOM05D004333 ORTHO05D005363 6.1e-35 153.7 312 33.7
Oeu001937.1 Olea europaea HOM05D004333 ORTHO05D005363 4.5e-30 137.5 191 42.4
BcaNung02039 Brassica carinata HOM05D004333 ORTHO05D005363 1.4e-28 132.5 323 32.2
Psat5g193520 Pisum sativum HOM05D001137 ORTHO05D001967 2.7e-27 128.3 122 49.2
Psat3g000280 Pisum sativum HOM05D002984 ORTHO05D005363 1.1e-23 116.3 103 50.5
CBR_g48777 Chara braunii HOM05D004333 ORTHO05D005363 3.8e-13 81.3 579 21.6
Nitab4.5_0004178g0010 Nicotiana tabacum HOM05D004333 ORTHO05D005363 4.7e-11 74.3 126 31.0
SMO356G0059 Selaginella moellendorffii HOM05D004333 ORTHO05D005363 6.1e-11 73.9 342 24.3
A02p40370 Brassica napus HOM05D004333 ORTHO05D005363 1.8e-07 62.4 103 37.9


User provided reference genes

Program Settings