Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 6.0e-214 747.3 385 100.0
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 2.8e-195 685.3 375 96.3
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 3.1e-21 107.1 401 30.7
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 5.3e-21 106.3 395 29.6
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 4.5e-20 103.2 393 31.3
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.3e-19 101.7 392 29.8
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.8e-19 100.1 386 29.3
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 3.8e-19 100.1 365 30.4
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 1.1e-18 98.6 385 29.9
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 1.5e-18 98.2 399 29.3
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 3.2e-18 97.1 388 27.6
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 1.4e-16 91.7 364 28.8
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 1.4e-16 91.7 405 28.9
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 4.0e-16 90.1 363 27.3
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 8.8e-16 89.0 363 28.1
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 9.7e-15 85.5 384 29.2
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 1.7e-14 84.7 187 32.1
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 1.1e-13 82.0 365 27.4
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 1.4e-13 81.6 387 28.4
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 9.1e-13 79.0 187 32.1
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 2.0e-12 77.8 370 27.0
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 4.5e-12 76.6 392 27.3
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 1.3e-11 75.1 170 30.6
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.7e-11 74.7 391 28.6
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.2e-11 74.3 381 28.6
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.2e-11 74.3 381 27.8
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 5.0e-11 73.2 211 31.8
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.1e-10 72.0 376 27.9
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 1.5e-10 71.6 399 27.1
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 3.2e-10 70.5 377 27.6
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 4.2e-10 70.1 482 23.9
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 4.2e-10 70.1 38 68.4
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 4.2e-10 70.1 395 26.6
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 5.5e-10 69.7 474 24.1
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 5.5e-10 69.7 366 27.3
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 7.2e-10 69.3 350 27.4
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 9.4e-10 68.9 367 27.2
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 9.4e-10 68.9 376 27.1
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 1.2e-09 68.6 371 25.3
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 2.7e-09 67.4 182 26.9
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 3.6e-09 67.0 311 28.6
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 3.6e-09 67.0 368 26.6
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 3.6e-09 67.0 337 24.3
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 6.1e-09 66.2 381 26.2
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 1.4e-08 65.1 386 27.7
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 1.8e-08 64.7 355 27.3
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 1.8e-08 64.7 407 25.8
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 2.3e-08 64.3 375 26.9
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 3.0e-08 63.9 242 28.1
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 5.2e-08 63.2 51 52.9
Aa31LG11G5940 Aethionema arabicum HOM05D010535 ORTHO05D005895 6.8e-08 62.8 37 64.9
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 6.8e-08 62.8 382 26.2
Hma1.2p1_3164F.1_g333530 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.5e-07 61.6 29 82.8
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 2.0e-07 61.2 190 31.1
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 2.0e-07 61.2 375 26.7
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 2.6e-07 60.8 427 25.1
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 7.5e-07 59.3 357 25.2
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 1.3e-06 58.5 193 25.4
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 1.7e-06 58.2 380 23.7
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 2.2e-06 57.8 201 26.4
Os01g0572100 Oryza sativa ssp. japonica HOM05D006920 ORTHO05D005895 2.2e-06 57.8 134 31.3


User provided reference genes

Program Settings