Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C01059 Eucalyptus grandis HOM05D002376 ORTHO05D004654 1.2e-45 186.0 88 100.0
Eucgr.J01841 Eucalyptus grandis HOM05D002376 ORTHO05D004654 1.3e-23 112.8 51 96.1
ATR0681G169 Amborella trichopoda HOM05D002376 ORTHO05D004654 7.9e-21 103.6 50 88.0
Carub.0004s1150 Capsella rubella HOM05D002376 ORTHO05D004654 1.8e-20 102.4 51 84.3
ClCG03G000240 Citrullus lanatus HOM05D002376 ORTHO05D004654 1.8e-20 102.4 50 86.0
MELO3C020503.2 Cucumis melo HOM05D002376 ORTHO05D004654 1.8e-20 102.4 50 86.0
arahy.Tifrunner.gnm1.ann1.D8LDTS Arachis hypogaea HOM05D002376 ORTHO05D004654 2.3e-20 102.1 52 82.7
CiPaw.14G052200 Carya illinoinensis HOM05D002376 ORTHO05D004654 2.3e-20 102.1 51 86.3
arahy.Tifrunner.gnm1.ann1.WIJ2N1 Arachis hypogaea HOM05D002376 ORTHO05D004654 3.0e-20 101.7 50 86.0
Ca_15029_v3 Cicer arietinum L. HOM05D002376 ORTHO05D004654 3.0e-20 101.7 50 86.0
Haze_24447 Corylus avellana HOM05D002376 ORTHO05D004654 3.0e-20 101.7 51 84.3
Sed0022472 Sechium edule HOM05D002376 ORTHO05D004654 3.0e-20 101.7 73 65.8
THA.LOC104826270 Tarenaya hassleriana HOM05D002376 ORTHO05D004654 3.0e-20 101.7 50 86.0
Dinv28716 Davidia involucrata HOM05D002376 ORTHO05D004654 3.9e-20 101.3 50 86.0
Hma1.2p1_1637F.1_g294890 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 3.9e-20 101.3 50 86.0
Phvul.006G076300 Phaseolus vulgaris HOM05D002376 ORTHO05D004654 5.1e-20 100.9 60 75.0
GSVIVG01024586001 Vitis vinifera HOM05D002376 ORTHO05D004654 5.1e-20 100.9 50 84.0
unitig_747.g21450 Utricularia gibba HOM05D002376 ORTHO05D004654 8.7e-20 100.1 63 74.6
Glyma.18G054900 Glycine max HOM05D002376 ORTHO05D004654 1.1e-19 99.8 60 73.3
SGA_v2.0_scaffold6G03299 Striga asiatica HOM05D002376 ORTHO05D004654 1.1e-19 99.8 60 75.0
Lj6g0027008 Lotus japonicus HOM05D002376 ORTHO05D004654 1.5e-19 99.4 73 64.4
Os07g0230500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D004654 1.5e-19 99.4 50 84.0
Peaxi162Scf01078g00415 Petunia axillaris HOM05D002376 ORTHO05D004654 1.5e-19 99.4 60 76.7
MD03G1055200 Malus domestica HOM05D002376 ORTHO05D004654 1.9e-19 99.0 50 86.0
MD11G1056400 Malus domestica HOM05D002376 ORTHO05D004654 1.9e-19 99.0 50 86.0
Prupe.1G106000 Prunus persica HOM05D002376 ORTHO05D004654 1.9e-19 99.0 50 86.0
Prupe.6G045800 Prunus persica HOM05D002376 ORTHO05D004654 1.9e-19 99.0 50 86.0
TAR369G0569 Trochodendron aralioides HOM05D002376 ORTHO05D004654 1.9e-19 99.0 75 62.7
AL4G25210 Arabidopsis lyrata HOM05D002376 ORTHO05D004654 2.5e-19 98.6 51 82.4
AT2G30350 Arabidopsis thaliana HOM05D002376 ORTHO05D004654 2.5e-19 98.6 51 82.4
Aqoxy2G00736 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 3.3e-19 98.2 51 80.4
CAN.G473.25 Capsicum annuum HOM05D002376 ORTHO05D004654 3.3e-19 98.2 60 73.3
Prupe.6G043600 Prunus persica HOM05D002376 ORTHO05D004654 3.3e-19 98.2 50 86.0
PGR119G0696 Punica granatum HOM05D002376 ORTHO05D004654 3.3e-19 98.2 51 84.3
Zm00001eb303730 Zea mays HOM05D002376 ORTHO05D004654 3.3e-19 98.2 51 82.4
MSTRG.21249 Avicennia marina HOM05D002376 ORTHO05D004654 4.3e-19 97.8 75 62.7
CANSAT54G2949 Cannabis sativa HOM05D002376 ORTHO05D004654 4.3e-19 97.8 50 84.0
Medtr3g466410 Medicago truncatula HOM05D002376 ORTHO05D004654 4.3e-19 97.8 50 84.0
TPR.G24962 Trifolium pratense HOM05D002376 ORTHO05D004654 4.3e-19 97.8 50 84.0
Aa31LG5G6350 Aethionema arabicum HOM05D002376 ORTHO05D004654 5.7e-19 97.4 50 84.0
Cpa.g.sc2.324 Carica papaya HOM05D002376 ORTHO05D004654 5.7e-19 97.4 51 82.4
HanXRQChr01g0013301 Helianthus annuus HOM05D002376 ORTHO05D004654 5.7e-19 97.4 60 75.0
Prupe.1G103400 Prunus persica HOM05D002376 ORTHO05D004654 5.7e-19 97.4 51 84.3
CSS0048295 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 7.4e-19 97.1 74 63.5
CSS0050025 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D004654 7.4e-19 97.1 74 63.5
Oeu011367.1 Olea europaea HOM05D002376 ORTHO05D004654 7.4e-19 97.1 60 73.3
Psat5g150440 Pisum sativum HOM05D002376 ORTHO05D004654 7.4e-19 97.1 60 75.0
VMungo0540G1534 Vigna mungo HOM05D002376 ORTHO05D004654 7.4e-19 97.1 60 73.3
Duzib168G1857 Durio zibethinus HOM05D002376 ORTHO05D004654 9.7e-19 96.7 50 82.0
Nn5g26899 Nelumbo nucifera HOM05D002376 ORTHO05D004654 9.7e-19 96.7 51 78.4
Thecc.09G361600 Theobroma cacao HOM05D002376 ORTHO05D004654 9.7e-19 96.7 50 84.0
TWI79G1034 Tripterygium wilfordii HOM05D002376 ORTHO05D004654 9.7e-19 96.7 60 71.7
Atru.chr1.2538 Acer truncatum HOM05D002376 ORTHO05D004654 1.6e-18 95.9 75 61.3
Ciclev10001469m.g Citrus clementina HOM05D002376 ORTHO05D004654 1.6e-18 95.9 60 73.3
Migut.D00832 Erythranthe guttata HOM05D002376 ORTHO05D004654 1.6e-18 95.9 50 82.0
Hma1.2p1_2270F.1_g318510 Hydrangea macrophylla HOM05D002376 ORTHO05D004654 1.6e-18 95.9 71 67.6
CDE04G2750 Ceratophyllum demersum HOM05D002376 ORTHO05D004654 2.2e-18 95.5 50 80.0
Cc01_g15150 Coffea canephora HOM05D002376 ORTHO05D004654 2.2e-18 95.5 60 71.7
Lsat_1_v5_gn_5_175220 Lactuca sativa HOM05D002376 ORTHO05D004654 2.2e-18 95.5 60 75.0
Potri.013G155900 Populus trichocarpa HOM05D002376 ORTHO05D004654 2.2e-18 95.5 60 75.0
QL01p025227 Quercus lobata HOM05D002376 ORTHO05D004654 2.2e-18 95.5 50 82.0
Rhsim01G0242200 Rhododendron simsii HOM05D002376 ORTHO05D004654 2.2e-18 95.5 51 82.4
Sabra13G0125800 Salix brachista HOM05D002376 ORTHO05D004654 2.2e-18 95.5 60 75.0
vmacro14632 Vaccinium macrocarpon HOM05D002376 ORTHO05D004654 2.2e-18 95.5 51 82.4
Actinidia11613 Actinidia chinensis HOM05D000055 ORTHO05D000057 2.8e-18 95.1 73 64.4
COL.COLO4_11190 Corchorus olitorius HOM05D002376 ORTHO05D004654 2.8e-18 95.1 51 80.4
Sp4g12910 Schrenkiella parvula HOM05D002376 ORTHO05D004654 2.8e-18 95.1 50 82.0
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 3.7e-18 94.7 50 82.0
A04p23110 Brassica napus HOM05D002376 ORTHO05D004654 4.8e-18 94.4 50 82.0
C04p59280 Brassica napus HOM05D002376 ORTHO05D004654 4.8e-18 94.4 50 82.0
BolC4t27433H Brassica oleracea HOM05D002376 ORTHO05D004654 4.8e-18 94.4 50 82.0
Lalb_Chr15g0085961 Lupinus albus HOM05D002376 ORTHO05D004654 4.8e-18 94.4 63 71.4
Nitab4.5_0002601g0080 Nicotiana tabacum HOM05D002376 ORTHO05D004654 4.8e-18 94.4 50 82.0
CsaV3_1G036670 Cucumis sativus L. HOM05D002376 ORTHO05D004654 6.3e-18 94.0 68 64.7
ECA248G1568 Erigeron canadensis HOM05D002376 ORTHO05D004654 6.3e-18 94.0 60 73.3
Thhalv10016841m.g Eutrema salsugineum HOM05D002376 ORTHO05D004654 6.3e-18 94.0 73 63.0
FvH4_3g40230 Fragaria vesca HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 80.0
FAN11G3581 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 80.0
FAN16G2868 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 80.0
FAN21G3096 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 80.0
FAN25G0776 Fragaria x ananassa HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 80.0
Lalb_Chr20g0117351 Lupinus albus HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 80.0
RcHm_v2.0_Chr5g0072441 Rosa chinensis HOM05D002376 ORTHO05D004654 6.3e-18 94.0 60 71.7
Solyc09g031790.4 Solanum lycopersicum HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 82.0
PGSC0003DMG400020864 Solanum tuberosum HOM05D002376 ORTHO05D004654 6.3e-18 94.0 50 82.0
MSTRG.12701 Avicennia marina HOM05D002376 ORTHO05D004654 8.2e-18 93.6 51 82.4
BcaB01g04112 Brassica carinata HOM05D002376 ORTHO05D004654 8.2e-18 93.6 50 78.0
Manes.18G137600 Manihot esculenta HOM05D002376 ORTHO05D004654 8.2e-18 93.6 75 60.0
SMO364G0016 Selaginella moellendorffii HOM05D002376 ORTHO05D004654 8.2e-18 93.6 51 78.4
BcaB06g28361 Brassica carinata HOM05D002376 ORTHO05D004654 1.1e-17 93.2 50 80.0
BcaC02g08025 Brassica carinata HOM05D002376 ORTHO05D004654 1.1e-17 93.2 50 80.0
BraA04t17841Z Brassica rapa HOM05D002376 ORTHO05D004654 1.1e-17 93.2 73 63.0
SHI19259 Sapria himalayana HOM05D002376 ORTHO05D004654 1.1e-17 93.2 54 74.1
Sopen09g014780 Solanum pennellii HOM05D002376 ORTHO05D004654 1.1e-17 93.2 50 82.0
CARHR123670 Cardamine hirsuta HOM05D002376 ORTHO05D004654 1.4e-17 92.8 73 63.0
Potri.019G127600 Populus trichocarpa HOM05D002376 ORTHO05D004654 1.4e-17 92.8 60 71.7
Actinidia23178 Actinidia chinensis HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 82.0
BcaC01g05989 Brassica carinata HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 78.0
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 78.0
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 78.0
Gohir.1Z049629 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 80.0
Gohir.A13G235800 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 80.0
Gohir.D04G000035 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 80.0
Gohir.D13G241450 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 80.0
Gorai.012G000400 Gossypium raimondii HOM05D002376 ORTHO05D004654 1.8e-17 92.4 50 80.0
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 2.4e-17 92.0 50 78.0
Sc12g0000140 Simmondsia chinensis HOM05D002376 ORTHO05D004654 2.4e-17 92.0 50 78.0
TAR623G0587 Trochodendron aralioides HOM05D002376 ORTHO05D004654 2.4e-17 92.0 50 80.0
EL10Ac7g15858 Beta vulgaris HOM05D002376 ORTHO05D004654 4.1e-17 91.3 50 76.0
Nitab4.5_0000734g0130 Nicotiana tabacum HOM05D002376 ORTHO05D004654 4.1e-17 91.3 50 80.0
Thecc.10G043800 Theobroma cacao HOM05D002376 ORTHO05D004654 4.1e-17 91.3 50 80.0
AUR62009726 Chenopodium quinoa HOM05D002376 ORTHO05D004654 6.9e-17 90.5 60 68.3
Hund05050 Selenicereus undatus HOM05D002376 ORTHO05D004654 9.0e-17 90.1 71 63.4
Pp3c10_1920 Physcomitrium patens HOM05D002376 ORTHO05D004654 1.2e-16 89.7 49 77.6
Gorai.013G272400 Gossypium raimondii HOM05D002376 ORTHO05D004654 1.5e-16 89.4 50 78.0
Aqoxy2G00731 Aquilegia oxysepala HOM05D002376 ORTHO05D004654 2.0e-16 89.0 50 78.0
DCAR_004798 Daucus carota HOM05D002376 ORTHO05D004654 2.6e-16 88.6 60 66.7
Gohir.A08G000016 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.6e-16 88.6 50 78.0
PSO339G0904 Papaver somniferum HOM05D002376 ORTHO05D004654 3.8e-15 84.7 50 76.0
PSO384G2467 Papaver somniferum HOM05D002376 ORTHO05D004654 3.8e-15 84.7 50 76.0
AagrBONN_evm.TU.Sc2ySwM_369.511 Anthoceros agrestis HOM05D002376 ORTHO05D004654 5.0e-15 84.3 51 66.7
C04p59230 Brassica napus HOM05D002376 ORTHO05D004654 5.0e-15 84.3 46 78.3
Mapoly0004s0007 Marchantia polymorpha HOM05D002376 ORTHO05D004654 1.1e-14 83.2 53 71.7
Cre07.g351500 Chlamydomonas reinhardtii HOM05D002376 ORTHO05D004654 4.2e-14 81.3 51 66.7
Gohir.1Z049334 Gossypium hirsutum HOM05D002376 ORTHO05D004654 1.2e-13 79.7 41 82.9
PRCOL_00000864 Prasinoderma coloniale HOM05D002376 ORTHO05D004654 1.1e-11 73.2 55 60.0
MCO16G118 Micromonas commoda HOM05D002376 ORTHO05D004654 2.0e-11 72.4 55 61.8
CBR_g31178 Chara braunii HOM05D002376 ORTHO05D004654 7.4e-11 70.5 50 58.0
FAN26G2163 Fragaria x ananassa HOM05D002376 ORTHO05D004654 2.2e-10 68.9 51 52.9
Cfa023829 Carpinus fangiana HOM05D002376 ORTHO05D004654 2.4e-09 65.5 60 50.0
Gohir.1Z049465 Gossypium hirsutum HOM05D002376 ORTHO05D004654 2.4e-09 65.5 53 56.6
PSO210G2598 Papaver somniferum HOM05D000916 ORTHO05D009274 1.1e-06 56.6 71 43.7
PSO170G4961 Papaver somniferum HOM05D000916 ORTHO05D009274 4.2e-06 54.7 70 40.0
SEGI_20425 Sequoiadendron giganteum HOM05D000916 ORTHO05D009274 4.2e-06 54.7 43 53.5


User provided reference genes

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