Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 2.4e-176 622.1 325 100.0
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 5.7e-101 371.7 324 61.7
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 2.2e-100 369.8 324 61.4
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 3.2e-99 365.9 321 62.0
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 9.2e-99 364.4 332 61.4
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 7.8e-98 361.3 325 60.6
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 3.0e-97 359.4 332 61.1
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 1.1e-96 357.5 321 61.1
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 4.0e-94 349.0 332 57.5
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 7.5e-93 344.7 332 58.1
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 4.9e-92 342.0 335 59.1
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.1e-91 340.9 329 58.7
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 5.4e-91 338.6 325 56.9
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.6e-90 337.0 325 56.6
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.6e-90 337.0 327 56.9
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 2.7e-90 336.3 332 57.5
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 1.0e-89 334.3 331 58.3
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.7e-89 333.6 325 56.6
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 1.7e-89 333.6 329 55.6
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 3.9e-89 332.4 328 57.3
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 4.3e-88 328.9 328 56.7
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 4.7e-87 325.5 325 56.6
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 1.4e-86 323.9 325 56.3
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 4.0e-86 322.4 325 54.5
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 8.9e-86 321.2 327 57.5
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.5e-85 320.5 329 54.4
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 2.0e-85 320.1 322 55.3
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 2.6e-85 319.7 329 55.3
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 9.8e-85 317.8 327 57.8
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 1.3e-84 317.4 326 54.0
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 2.2e-84 316.6 322 55.3
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 3.7e-84 315.8 329 53.8
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 4.9e-84 315.5 323 54.8
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 6.4e-84 315.1 326 54.6
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 8.3e-84 314.7 324 56.2
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 8.3e-84 314.7 327 55.0
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 1.1e-83 314.3 326 54.9
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.9e-83 313.5 332 55.1
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 1.9e-83 313.5 321 55.8
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.4e-83 313.2 333 55.9
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 2.4e-83 313.2 333 55.9
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 3.2e-83 312.8 371 50.9
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 3.2e-83 312.8 335 55.5
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 5.4e-83 312.0 325 55.1
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 5.4e-83 312.0 332 54.8
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 7.1e-83 311.6 324 56.2
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 9.2e-83 311.2 332 53.0
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 2.7e-82 309.7 326 55.5
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 2.3e-81 306.6 332 54.2
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.3e-81 306.6 332 54.2
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 2.3e-81 306.6 327 54.1
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 3.0e-81 306.2 325 54.2
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 8.6e-81 304.7 325 53.5
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.9e-80 303.5 344 53.5
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 5.6e-80 302.0 344 52.9
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 2.1e-79 300.1 325 52.9
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 2.8e-79 299.7 326 52.5
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 3.6e-79 299.3 328 54.9
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 4.7e-79 298.9 325 52.6
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 6.2e-79 298.5 325 54.2
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 8.1e-79 298.1 324 52.2
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 1.1e-78 297.7 327 54.1
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 1.4e-78 297.4 322 52.2
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 3.1e-78 296.2 326 54.6
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 2.6e-77 293.1 345 52.5
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 3.4e-77 292.7 325 52.6
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 9.9e-77 291.2 328 50.6
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 9.9e-77 291.2 328 52.4
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 1.7e-76 290.4 335 51.0
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 2.2e-76 290.0 328 52.7
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 8.4e-76 288.1 324 52.2
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 8.4e-76 288.1 329 52.6
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 3.2e-75 286.2 318 50.9
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 3.2e-75 286.2 327 51.4
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 7.1e-75 285.0 325 49.2
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 2.7e-74 283.1 332 50.9
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 2.5e-72 276.6 330 53.9
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 5.6e-72 275.4 325 50.5
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 1.2e-71 274.2 325 49.5
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 2.1e-71 273.5 327 50.5
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 3.6e-71 272.7 326 50.3
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 3.6e-71 272.7 326 50.3
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 6.2e-71 271.9 337 51.3
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 8.1e-71 271.6 325 50.8
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 3.1e-70 269.6 327 50.2
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 5.2e-70 268.9 326 50.3
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 1.5e-69 267.3 335 49.0
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 9.9e-69 264.6 328 49.4
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 4.9e-68 262.3 337 49.9
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 6.4e-68 261.9 322 48.8
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 5.4e-67 258.8 332 48.5
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 1.7e-65 253.8 328 48.5
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 1.9e-64 250.4 325 45.5
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 2.8e-63 246.5 328 43.9
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 8.1e-63 245.0 297 49.2
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 1.4e-62 244.2 273 50.5
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 5.8e-61 238.8 324 46.0
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 4.9e-60 235.7 406 41.6
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 3.5e-58 229.6 159 69.2
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.0e-57 228.0 326 44.5
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 1.0e-57 228.0 326 43.9
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 5.6e-56 222.2 325 43.1
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 4.8e-55 219.2 329 44.1
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 4.1e-38 162.9 164 51.8
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 6.9e-38 162.2 322 36.3
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 2.9e-36 156.8 168 51.8
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 3.8e-36 156.4 269 38.3
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 1.2e-34 151.4 333 33.6
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 1.9e-32 144.1 359 32.9
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 4.3e-32 142.9 269 42.4
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.8e-30 137.5 203 41.9
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 3.1e-30 136.7 213 39.9
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 3.1e-30 136.7 370 33.0
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 4.1e-30 136.3 326 36.2
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 5.7e-24 115.9 142 43.0
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 1.7e-23 114.4 92 63.0
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 1.7e-23 114.4 128 43.8
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 1.0e-20 105.1 138 39.9
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 5.5e-19 99.4 144 43.8
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.4e-17 94.7 238 36.6
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 3.9e-17 93.2 57 68.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 3.9e-17 93.2 57 68.4
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 5.7e-16 89.4 238 35.7
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 2.0e-08 64.3 120 38.3
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 1.1e-06 58.5 121 38.8
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 3.1e-06 57.0 42 66.7


User provided reference genes

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