Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 8.5e-66 253.4 121 100.0
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.0e-36 154.1 93 76.3
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 8.9e-23 110.5 95 56.8
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.2e-21 105.9 94 55.3
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.2e-21 105.9 94 55.3
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 4.9e-21 104.8 95 52.6
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 6.4e-21 104.4 95 52.6
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 6.4e-21 104.4 95 54.7
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 8.3e-21 104.0 94 52.1
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 8.3e-21 104.0 95 54.7
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.1e-20 103.6 93 52.7
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.1e-20 103.6 95 55.8
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.1e-20 103.6 87 52.9
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.4e-20 103.2 87 55.2
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 1.4e-20 103.2 87 54.0
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 1.4e-20 103.2 94 54.3
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.4e-20 103.2 94 54.3
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.4e-20 103.2 94 53.2
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.4e-20 103.2 95 50.5
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.4e-20 103.2 94 54.3
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 1.9e-20 102.8 94 52.1
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.9e-20 102.8 95 53.7
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.9e-20 102.8 95 53.7
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.9e-20 102.8 95 53.7
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 2.4e-20 102.4 94 50.0
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 3.2e-20 102.1 91 54.9
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 4.1e-20 101.7 94 52.1
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.4e-20 101.3 94 53.2
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 5.4e-20 101.3 94 50.0
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.0e-20 100.9 95 53.7
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.0e-20 100.9 95 53.7
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 7.0e-20 100.9 95 53.7
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 9.2e-20 100.5 93 55.9
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.2e-19 100.1 94 48.9
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.6e-19 99.8 87 50.6
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 1.6e-19 99.8 95 50.5
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.6e-19 99.8 95 52.6
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.6e-19 99.8 95 55.8
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.0e-19 99.4 87 50.6
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.0e-19 99.4 95 51.6
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 3.5e-19 98.6 95 51.6
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 4.6e-19 98.2 95 51.6
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.6e-19 98.2 95 52.6
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 6.0e-19 97.8 87 49.4
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 6.0e-19 97.8 94 51.1
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 6.0e-19 97.8 89 55.1
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.0e-18 97.1 87 49.4
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.3e-18 96.7 94 45.7
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.3e-18 96.7 95 51.6
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.3e-18 96.7 95 51.6
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.3e-18 96.7 95 52.6
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.7e-18 96.3 94 45.7
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 1.7e-18 96.3 95 51.6
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.3e-18 95.9 95 51.6
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 2.3e-18 95.9 95 50.5
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 3.9e-18 95.1 94 44.7
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 5.0e-18 94.7 94 44.7
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 5.0e-18 94.7 94 44.7
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 5.0e-18 94.7 94 44.7
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.0e-18 94.7 94 51.1
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 6.6e-18 94.4 95 51.6
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 8.6e-18 94.0 95 48.4
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 8.6e-18 94.0 95 50.5
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 8.6e-18 94.0 95 48.4
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 1.1e-17 93.6 95 48.4
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 1.1e-17 93.6 95 50.5
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.5e-17 93.2 95 47.4
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.5e-17 93.2 95 47.4
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.5e-17 93.2 94 50.0
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.5e-17 93.2 87 54.0
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.9e-17 92.8 95 51.6
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 2.5e-17 92.4 88 50.0
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 2.5e-17 92.4 94 48.9
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 2.5e-17 92.4 95 49.5
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 3.3e-17 92.0 95 48.4
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 4.3e-17 91.7 95 50.5
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 5.6e-17 91.3 86 51.2
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 5.6e-17 91.3 94 47.9
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 7.3e-17 90.9 95 48.4
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 7.3e-17 90.9 95 48.4
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 7.3e-17 90.9 95 48.4
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 9.5e-17 90.5 95 48.4
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 9.5e-17 90.5 87 50.6
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.2e-16 90.1 95 48.4
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.2e-16 90.1 93 49.5
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 2.1e-16 89.4 95 46.3
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 2.8e-16 89.0 95 48.4
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 3.6e-16 88.6 96 49.0
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 4.7e-16 88.2 95 49.5
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.2e-16 87.8 94 45.7
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 6.2e-16 87.8 96 50.0
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 6.2e-16 87.8 95 47.4
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.1e-15 87.0 95 48.4
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.1e-15 87.0 94 47.9
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.4e-15 86.7 95 47.4
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.4e-15 86.7 95 47.4
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 2.3e-15 85.9 92 45.7
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.3e-15 85.9 96 47.9
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 3.1e-15 85.5 94 48.9
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 3.1e-15 85.5 94 47.9
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 5.2e-15 84.7 95 44.2
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 5.2e-15 84.7 95 46.3
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 8.9e-15 84.0 96 47.9
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 8.9e-15 84.0 86 46.5
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.2e-14 83.6 94 43.6
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 1.5e-14 83.2 95 43.2
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 2.0e-14 82.8 95 43.2
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 2.0e-14 82.8 95 46.3
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 3.4e-14 82.0 94 44.7
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 5.8e-14 81.3 96 44.8
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 7.5e-14 80.9 88 50.0
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 2.2e-13 79.3 95 43.2
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.7e-13 78.6 89 42.7
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 8.3e-13 77.4 95 44.2
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.3e-13 77.4 90 47.8
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 1.4e-12 76.6 86 43.0
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.9e-12 76.3 93 45.2
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.4e-12 75.9 89 46.1
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 5.4e-12 74.7 95 42.1
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.2e-11 73.6 88 45.5
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 7.8e-11 70.9 95 42.1


User provided reference genes

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