Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00519 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.9e-72 274.6 133 100.0
Eucgr.J01056 Eucalyptus grandis HOM05D000003 ORTHO05D000126 5.2e-24 114.8 131 42.0
Eucgr.H02687 Eucalyptus grandis HOM05D000003 ORTHO05D000126 8.8e-24 114.0 131 43.5
Eucgr.A01843 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.4e-23 111.7 131 40.5
Eucgr.L02151 Eucalyptus grandis HOM05D000003 ORTHO05D000126 9.8e-23 110.5 132 40.2
Eucgr.I02046 Eucalyptus grandis HOM05D000003 ORTHO05D000126 2.8e-22 109.0 131 37.4
Eucgr.H01226 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.8e-22 108.2 131 38.9
Eucgr.G01608 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.5e-20 101.7 131 38.2
Eucgr.H00840 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.5e-20 101.7 132 37.9
Eucgr.D02416 Eucalyptus grandis HOM05D000003 ORTHO05D000126 7.7e-20 100.9 131 37.4
Eucgr.K00628 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.0e-19 100.5 131 40.5
Eucgr.F00058 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.1e-18 97.1 132 37.9
Eucgr.J02093 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.1e-18 97.1 127 36.2
Eucgr.E01407 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.3e-18 95.5 130 36.2
Eucgr.I00784 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.6e-17 93.2 130 33.8
Eucgr.C02001 Eucalyptus grandis HOM05D000003 ORTHO05D000126 2.1e-17 92.8 118 39.0
Eucgr.D02404 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.7e-17 91.7 131 35.1
Eucgr.K01585 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.0e-16 90.5 132 32.6
Eucgr.G00832 Eucalyptus grandis HOM05D000003 ORTHO05D000126 2.3e-16 89.4 113 39.8
Eucgr.L02110 Eucalyptus grandis HOM05D000003 ORTHO05D000126 8.9e-16 87.4 107 42.1
Eucgr.B01330 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.5e-15 86.7 112 35.7
Eucgr.L03030 Eucalyptus grandis HOM05D000003 ORTHO05D000126 7.5e-15 84.3 130 33.1
Eucgr.C02564 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.3e-14 83.6 113 37.2
Eucgr.L01803 Eucalyptus grandis HOM05D000003 ORTHO05D000126 2.8e-14 82.4 122 31.1
Eucgr.C02117 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.7e-14 82.0 111 34.2
Eucgr.B02430 Eucalyptus grandis HOM05D000003 ORTHO05D000126 8.3e-14 80.9 112 34.8
Eucgr.H05091 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.8e-13 79.7 112 33.9
Eucgr.H03448 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.1e-13 78.6 130 30.0
Eucgr.H01799 Eucalyptus grandis HOM05D000003 ORTHO05D000126 7.0e-13 77.8 128 34.4
Eucgr.K02013 Eucalyptus grandis HOM05D000003 ORTHO05D000126 7.0e-13 77.8 107 35.5
Eucgr.D00722 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.5e-12 75.5 92 41.3
QL04p045400 Quercus lobata HOM05D000003 ORTHO05D000126 1.0e-11 73.9 122 31.1
QL04p084567 Quercus lobata HOM05D000003 ORTHO05D000126 2.3e-11 72.8 97 38.1
QL06p002686 Quercus lobata HOM05D000003 ORTHO05D000126 2.9e-11 72.4 101 34.7
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 2.9e-11 72.4 117 33.3
QL12p015288 Quercus lobata HOM05D000003 ORTHO05D000126 8.6e-11 70.9 117 30.8
QL93p2011_0013 Quercus lobata HOM05D000003 ORTHO05D000126 8.6e-11 70.9 117 30.8
Eucgr.H01492 Eucalyptus grandis HOM05D000003 ORTHO05D000126 2.5e-10 69.3 130 33.8
Eucgr.A02218 Eucalyptus grandis HOM05D000003 ORTHO05D000126 9.5e-10 67.4 113 31.9
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 9.5e-10 67.4 112 31.2
QL02p056055 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-09 67.0 116 31.0
QL07p017701 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-09 67.0 103 33.0
Eucgr.D01521 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.6e-09 66.6 92 33.7
Hma1.2p1_1573F.1_g291540 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.6e-09 66.6 119 31.9
QL09p041419 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-09 66.6 117 30.8
TWI23G1165 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.6e-09 66.6 123 29.3
QL10p065510 Quercus lobata HOM05D000003 ORTHO05D000126 2.8e-09 65.9 117 29.9
Eucgr.F00181 Eucalyptus grandis HOM05D000003 ORTHO05D000126 4.7e-09 65.1 97 30.9
QL06p037254 Quercus lobata HOM05D000003 ORTHO05D000126 4.7e-09 65.1 117 29.9
Eucgr.A00179 Eucalyptus grandis HOM05D000003 ORTHO05D000126 6.1e-09 64.7 86 37.2
QL02p019249 Quercus lobata HOM05D000003 ORTHO05D000126 6.1e-09 64.7 104 32.7
QL05p080911 Quercus lobata HOM05D000774 ORTHO05D000602 6.1e-09 64.7 112 29.5
QL10p031737 Quercus lobata HOM05D000003 ORTHO05D000126 8.0e-09 64.3 126 28.6
TWI31G0464 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 8.0e-09 64.3 123 28.5
Eucgr.L01399 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.0e-08 63.9 84 45.2
QL03p033500 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-08 63.2 112 29.5
TWI63G1223 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 1.8e-08 63.2 124 26.6
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 3.1e-08 62.4 87 33.3
Rhsim07G0162600 Rhododendron simsii HOM05D000358 ORTHO05D005121 3.1e-08 62.4 118 28.8
COL.COLO4_25222 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.0e-08 62.0 116 28.4
Dinv03294 Davidia involucrata HOM05D000003 ORTHO05D000126 4.0e-08 62.0 119 28.6
Lj3g0020321 Lotus japonicus HOM05D000003 ORTHO05D000126 4.0e-08 62.0 112 28.6
Lj4g0019340 Lotus japonicus HOM05D000003 ORTHO05D000126 4.0e-08 62.0 112 28.6
QL04p011564 Quercus lobata HOM05D000009 ORTHO05D000126 4.0e-08 62.0 117 29.1
QL08p034912 Quercus lobata HOM05D000003 ORTHO05D000126 4.0e-08 62.0 105 27.6
Eucgr.D01145 Eucalyptus grandis HOM05D000003 ORTHO05D000126 5.2e-08 61.6 85 35.3
Eucgr.A01526 Eucalyptus grandis HOM05D000003 ORTHO05D000126 6.8e-08 61.2 101 33.7
QL08p037895 Quercus lobata HOM05D000003 ORTHO05D000126 6.8e-08 61.2 117 28.2
Atru.chr2.314 Acer truncatum HOM05D000003 ORTHO05D000126 1.2e-07 60.5 121 26.4
CANSAT25G1444 Cannabis sativa HOM05D000003 ORTHO05D000126 1.2e-07 60.5 124 26.6
COL.COLO4_04241 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.2e-07 60.5 103 31.1
QL02p095718 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-07 60.5 103 30.1
QL08p033637 Quercus lobata HOM05D000003 ORTHO05D000006 1.2e-07 60.5 107 30.8
Rhsim10G0077300 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.2e-07 60.5 118 28.8
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 1.5e-07 60.1 126 27.0
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 1.5e-07 60.1 126 27.0
Lj5g0012424 Lotus japonicus HOM05D000003 ORTHO05D000126 1.5e-07 60.1 107 26.2
QL04p060974 Quercus lobata HOM05D000003 ORTHO05D000126 1.5e-07 60.1 117 27.4
QL07p019949 Quercus lobata HOM05D000003 ORTHO05D000006 1.5e-07 60.1 113 28.3
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-07 60.1 107 29.9
QL08p015957 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-07 59.7 107 30.8
Atru.chr13.2520 Acer truncatum HOM05D000003 ORTHO05D000126 2.6e-07 59.3 119 27.7
COL.COLO4_15631 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.6e-07 59.3 110 31.8
QL03p026642 Quercus lobata HOM05D000003 ORTHO05D000126 2.6e-07 59.3 105 29.5
Rhsim01G0139400 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.6e-07 59.3 118 26.3
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.6e-07 59.3 112 31.2
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 2.6e-07 59.3 123 27.6
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 2.6e-07 59.3 117 28.2
CANSAT56G2987 Cannabis sativa HOM05D000003 ORTHO05D000126 3.4e-07 58.9 116 25.9
Lj2g0023122 Lotus japonicus HOM05D000003 ORTHO05D000126 3.4e-07 58.9 110 26.4
Rhsim11G0002700 Rhododendron simsii HOM05D059582 ORTHO05D000126 3.4e-07 58.9 112 31.2
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 3.4e-07 58.9 123 27.6
Atru.chr6.1085 Acer truncatum HOM05D000003 ORTHO05D000126 4.4e-07 58.5 123 26.8
COL.COLO4_26026 Corchorus olitorius HOM05D000003 ORTHO05D000126 4.4e-07 58.5 89 31.5
QL09p002839 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-07 58.5 105 28.6
Aa31sc441G30 Aethionema arabicum HOM05D000496 ORTHO05D000411 5.8e-07 58.2 97 32.0
CANSAT56G2562 Cannabis sativa HOM05D000003 ORTHO05D000126 5.8e-07 58.2 116 25.9
Dinv08166 Davidia involucrata HOM05D000003 ORTHO05D000126 5.8e-07 58.2 114 30.7
QL05p016061 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-07 58.2 123 25.2
QL07p045178 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-07 58.2 115 33.9
QL09p040040 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-07 58.2 105 27.6
QL11p021813 Quercus lobata HOM05D000003 ORTHO05D000126 5.8e-07 58.2 107 29.9
Rhsim10G0112300 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.8e-07 58.2 118 26.3
TAR648G0002 Trochodendron aralioides HOM05D000003 ORTHO05D000126 5.8e-07 58.2 111 31.5
CANSAT80G1431 Cannabis sativa HOM05D000003 ORTHO05D000126 7.5e-07 57.8 123 26.0
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 7.5e-07 57.8 112 25.9
QL09p026026 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-07 57.8 111 28.8
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-07 57.8 100 31.0
QL12p016979 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-07 57.8 103 28.2
CANSAT54G2152 Cannabis sativa HOM05D000003 ORTHO05D000004 9.8e-07 57.4 125 24.8
CANSAT64G2526 Cannabis sativa HOM05D000003 ORTHO05D000126 9.8e-07 57.4 124 25.8
COL.COLO4_38315 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.8e-07 57.4 116 27.6
Lj1g0014216 Lotus japonicus HOM05D000003 ORTHO05D000126 9.8e-07 57.4 112 28.6
Lj4g0014165 Lotus japonicus HOM05D000003 ORTHO05D000126 9.8e-07 57.4 112 29.5
QL02p082094 Quercus lobata HOM05D000003 ORTHO05D000126 9.8e-07 57.4 110 30.9
QL03p060676 Quercus lobata HOM05D000003 ORTHO05D000126 9.8e-07 57.4 105 25.7
Ah.07g199530 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.3e-06 57.0 121 26.4
Ah.07g199660 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.3e-06 57.0 121 26.4
Dinv10031 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 57.0 96 30.2
Lj5P52T12 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-06 57.0 110 29.1
QL03p012601 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.0 116 28.4
QL05p001179 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.0 105 28.6
QL09p012273 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-06 57.0 95 32.6
CANSAT01G1830 Cannabis sativa HOM05D000003 ORTHO05D000126 1.7e-06 56.6 111 29.7
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.7e-06 56.6 123 26.8
Eucgr.C01618 Eucalyptus grandis HOM05D000003 ORTHO05D000126 1.7e-06 56.6 83 32.5
Hma1.2p1_0481F.1_g162210 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.7e-06 56.6 86 30.2
QL03p061166 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 56.6 105 28.6
QL04p039774 Quercus lobata HOM05D000003 ORTHO05D000126 1.7e-06 56.6 107 26.2
QL09p045506 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-06 56.6 103 30.1
COL.COLO4_25190 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.2e-06 56.2 118 28.0
Haze_05315 Corylus avellana HOM05D022711 ORTHO05D000126 2.2e-06 56.2 123 23.6
Dinv25744 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-06 56.2 123 28.5
QL11p025676 Quercus lobata HOM05D000003 ORTHO05D000126 2.2e-06 56.2 106 26.4
Rhsim04G0047100 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.2e-06 56.2 118 27.1
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.2e-06 56.2 94 29.8
TWI34G0137 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.2e-06 56.2 123 29.3
Atru.chr11.854 Acer truncatum HOM05D000003 ORTHO05D000126 2.9e-06 55.8 123 25.2
BcaB06g25722 Brassica carinata HOM05D013103 ORTHO05D018244 2.9e-06 55.8 94 33.0
Dinv10075 Davidia involucrata HOM05D000003 ORTHO05D000126 2.9e-06 55.8 126 25.4
QL02p003383 Quercus lobata HOM05D000003 ORTHO05D000126 2.9e-06 55.8 114 25.4
QL04p002610 Quercus lobata HOM05D000038 ORTHO05D000126 2.9e-06 55.8 103 28.2
QL05p006022 Quercus lobata HOM05D000003 ORTHO05D000126 2.9e-06 55.8 105 27.6
Rhsim02G0107700 Rhododendron simsii HOM05D000048 ORTHO05D000006 2.9e-06 55.8 122 25.4
BcaB02g10661 Brassica carinata HOM05D000496 ORTHO05D000411 3.7e-06 55.5 120 27.5
Dinv05257 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-06 55.5 99 27.3
Dinv07777 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-06 55.5 99 27.3
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 3.7e-06 55.5 117 24.8
TWI38G1337 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 3.7e-06 55.5 122 28.7
Atru.chr3.2408 Acer truncatum HOM05D000003 ORTHO05D000126 4.9e-06 55.1 119 26.9
Aa31LG2G19810 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.9e-06 55.1 96 33.3
Aa31LG5G20950 Aethionema arabicum HOM05D000496 ORTHO05D000411 4.9e-06 55.1 85 31.8
BcaC01g02297 Brassica carinata HOM05D000496 ORTHO05D000411 4.9e-06 55.1 97 32.0
CANSAT25G0594 Cannabis sativa HOM05D000003 ORTHO05D000126 4.9e-06 55.1 116 25.9
Oeu027302.1 Olea europaea HOM05D000003 ORTHO05D000126 4.9e-06 55.1 72 33.3
Oeu027303.1 Olea europaea HOM05D000003 ORTHO05D000126 4.9e-06 55.1 72 33.3
Oeu027304.1 Olea europaea HOM05D000003 ORTHO05D000126 4.9e-06 55.1 72 33.3
AUR62006131 Chenopodium quinoa HOM05D000003 ORTHO05D000126 6.4e-06 54.7 118 27.1
Thhalv10009818m.g Eutrema salsugineum HOM05D000496 ORTHO05D000411 6.4e-06 54.7 104 28.8
Lj8C82T10 Lonicera japonica HOM05D000003 ORTHO05D000126 6.4e-06 54.7 123 26.8
QL10p002713 Quercus lobata HOM05D000003 ORTHO05D000126 6.4e-06 54.7 118 28.0
Aa31LG1G4620 Aethionema arabicum HOM05D000496 ORTHO05D000411 8.3e-06 54.3 83 31.3
Aa31LG9G15190 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-06 54.3 113 31.0
CANSAT56G2563 Cannabis sativa HOM05D000003 ORTHO05D000126 8.3e-06 54.3 124 26.6
COL.COLO4_34402 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.3e-06 54.3 92 33.7
Dinv02876 Davidia involucrata HOM05D000003 ORTHO05D000007 8.3e-06 54.3 83 31.3
QL08p035793 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-06 54.3 114 29.8
QL10p028980 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-06 54.3 107 29.9
QL10p029082 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-06 54.3 107 29.9
QL11p056942 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-06 54.3 103 25.2
Rhsim01G0092500 Rhododendron simsii HOM05D000003 ORTHO05D000126 8.3e-06 54.3 124 25.0


User provided reference genes

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