Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C00098 Eucalyptus grandis HOM05D001433 ORTHO05D013129 2.6e-91 338.6 158 100.0
Eucgr.L03008 Eucalyptus grandis HOM05D001433 ORTHO05D005019 5.3e-76 287.7 138 98.6
Eucgr.A01471 Eucalyptus grandis HOM05D001433 ORTHO05D005019 7.9e-72 273.9 138 94.9
arahy.Tifrunner.gnm1.ann1.A1ZC3A Arachis hypogaea HOM05D001433 ORTHO05D005019 2.4e-68 262.3 138 87.7
arahy.Tifrunner.gnm1.ann1.ZYZ79R Arachis hypogaea HOM05D001433 ORTHO05D005019 2.4e-68 262.3 138 87.7
Phvul.009G053900 Phaseolus vulgaris HOM05D001433 ORTHO05D005019 5.3e-68 261.2 138 87.0
Lj1A1014T43 Lonicera japonica HOM05D001433 ORTHO05D005019 6.9e-68 260.8 138 87.7
GSVIVG01038714001 Vitis vinifera HOM05D001433 ORTHO05D005019 6.9e-68 260.8 138 86.2
Dinv35322 Davidia involucrata HOM05D001433 ORTHO05D005019 9.1e-68 260.4 138 86.2
Atru.chr1.150 Acer truncatum HOM05D001433 ORTHO05D005019 1.2e-67 260.0 138 87.7
Aqoxy5G04232 Aquilegia oxysepala HOM05D001433 ORTHO05D005019 1.2e-67 260.0 138 86.2
Duzib084G0325 Durio zibethinus HOM05D001433 ORTHO05D005019 1.5e-67 259.6 138 87.7
Glyma.04G236900 Glycine max HOM05D001433 ORTHO05D005019 1.5e-67 259.6 138 86.2
COL.COLO4_03428 Corchorus olitorius HOM05D001433 ORTHO05D005019 2.0e-67 259.2 138 86.2
Thecc.03G195800 Theobroma cacao HOM05D001433 ORTHO05D005019 2.0e-67 259.2 138 86.2
VMungo1309G1831 Vigna mungo HOM05D001433 ORTHO05D005019 2.0e-67 259.2 138 85.5
DCAR_020316 Daucus carota HOM05D001433 ORTHO05D005019 2.6e-67 258.8 138 86.2
Lalb_Chr11g0066781 Lupinus albus HOM05D001433 ORTHO05D005019 2.6e-67 258.8 138 85.5
TWI14G0941 Tripterygium wilfordii HOM05D001433 ORTHO05D005019 2.6e-67 258.8 138 87.0
arahy.Tifrunner.gnm1.ann1.Z6RGWR Arachis hypogaea HOM05D001433 ORTHO05D005019 3.4e-67 258.5 138 87.0
Cpa.g.sc3.65 Carica papaya HOM05D001433 ORTHO05D005019 3.4e-67 258.5 138 85.5
CsaV3_3G027930 Cucumis sativus L. HOM05D001433 ORTHO05D005019 3.4e-67 258.5 138 85.5
Gohir.D12G251500 Gossypium hirsutum HOM05D001433 ORTHO05D005019 3.4e-67 258.5 138 86.2
Actinidia08638 Actinidia chinensis HOM05D001433 ORTHO05D005019 7.7e-67 257.3 138 86.2
CANSAT21G0603 Cannabis sativa HOM05D001433 ORTHO05D005019 7.7e-67 257.3 138 87.0
Gohir.A12G250700 Gossypium hirsutum HOM05D001433 ORTHO05D005019 7.7e-67 257.3 138 86.2
Duzib205G1094 Durio zibethinus HOM05D001433 ORTHO05D005019 1.0e-66 256.9 138 86.2
Glyma.06G127400 Glycine max HOM05D001433 ORTHO05D005019 1.0e-66 256.9 138 85.5
Oeu041044.1 Olea europaea HOM05D001433 ORTHO05D005019 1.0e-66 256.9 138 85.5
Cc02_g01700 Coffea canephora HOM05D001433 ORTHO05D005019 1.3e-66 256.5 138 84.1
Haze_00186 Corylus avellana HOM05D001433 ORTHO05D005019 1.3e-66 256.5 138 84.1
Gorai.008G269600 Gossypium raimondii HOM05D001433 ORTHO05D005019 1.3e-66 256.5 138 85.5
Medtr1g027020 Medicago truncatula HOM05D001433 ORTHO05D005019 1.3e-66 256.5 138 85.5
Sopen03g023210 Solanum pennellii HOM05D001433 ORTHO05D005019 1.3e-66 256.5 138 85.5
MELO3C008481.2 Cucumis melo HOM05D001433 ORTHO05D005019 1.7e-66 256.1 138 84.8
Glyma.19G065600 Glycine max HOM05D001433 ORTHO05D005019 1.7e-66 256.1 138 86.2
Lj3C907T3 Lonicera japonica HOM05D001433 ORTHO05D005019 1.7e-66 256.1 138 84.8
Lj1g0027622 Lotus japonicus HOM05D001433 ORTHO05D005019 1.7e-66 256.1 138 86.2
Manes.06G159400 Manihot esculenta HOM05D001433 ORTHO05D005019 1.7e-66 256.1 144 81.9
Manes.14G006836 Manihot esculenta HOM05D001433 ORTHO05D005019 1.7e-66 256.1 144 81.2
PSO170G0996 Papaver somniferum HOM05D001433 ORTHO05D005019 1.7e-66 256.1 138 84.1
PGR042G1482 Punica granatum HOM05D001433 ORTHO05D005019 1.7e-66 256.1 138 87.0
Glyma.14G162300 Glycine max HOM05D001433 ORTHO05D005019 2.2e-66 255.8 138 86.2
Potri.015G017500 Populus trichocarpa HOM05D001433 ORTHO05D005019 2.2e-66 255.8 138 86.2
Prupe.2G311700 Prunus persica HOM05D001433 ORTHO05D005019 2.2e-66 255.8 138 84.8
RcHm_v2.0_Chr1g0381001 Rosa chinensis HOM05D001433 ORTHO05D005019 2.2e-66 255.8 138 84.8
AUR62019375 Chenopodium quinoa HOM05D001433 ORTHO05D005019 2.9e-66 255.4 138 84.8
Duzib068G1332 Durio zibethinus HOM05D001433 ORTHO05D005019 2.9e-66 255.4 138 85.5
Ciclev10004120m.g Citrus clementina HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 85.5
FvH4_7g31770 Fragaria vesca HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.1
FAN01G1716 Fragaria x ananassa HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.1
FAN03G1831 Fragaria x ananassa HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.1
FAN06G0708 Fragaria x ananassa HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.1
Nn3g19010 Nelumbo nucifera HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.8
Nitab4.5_0002492g0040 Nicotiana tabacum HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.8
Solyc03g083440.4 Solanum lycopersicum HOM05D001433 ORTHO05D005019 3.8e-66 255.0 138 84.8
arahy.Tifrunner.gnm1.ann1.HI2JIU Arachis hypogaea HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 85.5
EL10Ac3g05303 Beta vulgaris HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 85.5
AUR62006114 Chenopodium quinoa HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 84.1
FAN10G1144 Fragaria x ananassa HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 83.3
FAN10G3586 Fragaria x ananassa HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 83.3
MD07G1290500 Malus domestica HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 83.3
PSO063G5383 Papaver somniferum HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 83.3
QL09p009608 Quercus lobata HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 85.5
Sc13g0009760 Simmondsia chinensis HOM05D001433 ORTHO05D005019 5.0e-66 254.6 138 84.1
Peaxi162Scf00550g00052 Petunia axillaris HOM05D001433 ORTHO05D005019 6.5e-66 254.2 138 85.5
TPR.G20023 Trifolium pratense HOM05D001433 ORTHO05D005019 6.5e-66 254.2 138 84.8
CSS0050330 Camellia sinensis var. sinensis HOM05D001433 ORTHO05D005019 8.5e-66 253.8 138 86.2
Hund11674 Selenicereus undatus HOM05D001433 ORTHO05D005019 8.5e-66 253.8 138 84.1
Aa31LG3G9620 Aethionema arabicum HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 84.8
CARHR266580 Cardamine hirsuta HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 84.8
Ca_12725_v3 Cicer arietinum L. HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 84.1
FAN06G0504 Fragaria x ananassa HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 82.6
Gohir.A08G095962 Gossypium hirsutum HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 84.8
Phvul.001G076400 Phaseolus vulgaris HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 84.8
TWI23G0733 Tripterygium wilfordii HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 84.8
VMungo0647G1305 Vigna mungo HOM05D001433 ORTHO05D005019 1.1e-65 253.4 138 85.5
Rhsim09G0205100 Rhododendron simsii HOM05D001433 ORTHO05D005019 1.4e-65 253.1 138 83.3
Actinidia34209 Actinidia chinensis HOM05D001433 ORTHO05D005019 1.9e-65 252.7 138 84.8
CiPaw.05G252100 Carya illinoinensis HOM05D001433 ORTHO05D005019 1.9e-65 252.7 138 83.3
Dinv29294 Davidia involucrata HOM05D001433 ORTHO05D005019 1.9e-65 252.7 138 84.8
Oeu041320.1 Olea europaea HOM05D001433 ORTHO05D005019 1.9e-65 252.7 138 84.1
Oeu041327.1 Olea europaea HOM05D001433 ORTHO05D005019 1.9e-65 252.7 138 84.1
Potri.012G011700 Populus trichocarpa HOM05D001433 ORTHO05D005019 1.9e-65 252.7 138 84.1
TAR629G0032 Trochodendron aralioides HOM05D001433 ORTHO05D005019 1.9e-65 252.7 142 82.4
Carub.0008s1362 Capsella rubella HOM05D001433 ORTHO05D005019 2.5e-65 252.3 138 84.1
ClCG05G008840 Citrullus lanatus HOM05D001433 ORTHO05D005019 2.5e-65 252.3 138 83.3
Thhalv10012414m.g Eutrema salsugineum HOM05D001433 ORTHO05D005019 2.5e-65 252.3 138 84.1
Hund04854 Selenicereus undatus HOM05D001433 ORTHO05D005019 2.5e-65 252.3 138 84.1
MBI06_g08464_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D005019 3.2e-65 251.9 138 84.1
MD01G1219500 Malus domestica HOM05D001433 ORTHO05D005019 3.2e-65 251.9 138 83.3
SalBow4G0367 Salvia bowleyana HOM05D001433 ORTHO05D005019 3.2e-65 251.9 138 85.5
SalBow4G2448 Salvia bowleyana HOM05D001433 ORTHO05D005019 3.2e-65 251.9 138 85.5
A03p15140 Brassica napus HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 84.1
BraA03t10809Z Brassica rapa HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 84.1
CSS0007758 Camellia sinensis var. sinensis HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 84.8
DCAR_008916 Daucus carota HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 83.3
HanXRQChr15g0493171 Helianthus annuus HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 83.3
Lsat_1_v5_gn_9_58201 Lactuca sativa HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 84.8
Sabra15G0013400 Salix brachista HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 84.1
THA.LOC104811925 Tarenaya hassleriana HOM05D001433 ORTHO05D005019 4.2e-65 251.5 138 82.6
BcaC01g06255 Brassica carinata HOM05D001433 ORTHO05D005019 5.5e-65 251.1 138 83.3
BolC3t14177H Brassica oleracea HOM05D001433 ORTHO05D005019 5.5e-65 251.1 138 83.3
CiPaw.06G009900 Carya illinoinensis HOM05D001433 ORTHO05D005019 5.5e-65 251.1 144 79.2
Sp6g15593 Schrenkiella parvula HOM05D001433 ORTHO05D005019 5.5e-65 251.1 138 83.3
Aqoxy7G00099 Aquilegia oxysepala HOM05D001433 ORTHO05D005019 9.4e-65 250.4 138 81.9
AL8G28160 Arabidopsis lyrata HOM05D001433 ORTHO05D005019 9.4e-65 250.4 138 83.3
ECA232G2377 Erigeron canadensis HOM05D001433 ORTHO05D005019 9.4e-65 250.4 138 84.1
Sed0021586 Sechium edule HOM05D001433 ORTHO05D005019 9.4e-65 250.4 138 83.3
TAR375G0916 Trochodendron aralioides HOM05D001433 ORTHO05D005019 1.6e-64 249.6 138 82.6
Rhsim03G0207200 Rhododendron simsii HOM05D001433 ORTHO05D005019 2.7e-64 248.8 138 84.1
Sabra12G0018500 Salix brachista HOM05D001433 ORTHO05D005019 3.6e-64 248.4 138 82.6
Migut.F00228 Erythranthe guttata HOM05D001433 ORTHO05D005019 4.7e-64 248.1 138 83.3
AT5G53460 Arabidopsis thaliana HOM05D001433 ORTHO05D005019 7.9e-64 247.3 138 82.6
HanXRQChr09g0253001 Helianthus annuus HOM05D001433 ORTHO05D005019 1.4e-63 246.5 138 81.9
Ah.07g205860 Amaranthus hybridus HOM05D001433 ORTHO05D005019 1.8e-63 246.1 138 81.9
ATR0602G279 Amborella trichopoda HOM05D001433 ORTHO05D005019 1.8e-63 246.1 138 81.9
MBI07_g07096_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D005019 2.3e-63 245.7 138 81.9
Sed0006803 Sechium edule HOM05D001433 ORTHO05D005019 2.3e-63 245.7 138 81.9
unitig_748.g8526 Utricularia gibba HOM05D001433 ORTHO05D005019 1.1e-62 243.4 138 79.0
HPP92_008165 Vanilla planifolia HOM05D001433 ORTHO05D005019 2.6e-62 242.3 138 79.0
Os01g0681900 Oryza sativa ssp. japonica HOM05D001433 ORTHO05D005019 1.3e-61 240.0 144 78.5
Lalb_Chr08g0240351 Lupinus albus HOM05D001433 ORTHO05D005019 4.8e-61 238.0 165 70.9
CDE10G1071 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 1.4e-60 236.5 138 77.5
Os05g0555600 Oryza sativa ssp. japonica HOM05D001433 ORTHO05D005019 1.4e-60 236.5 138 79.0
Zm00001eb360480 Zea mays HOM05D001433 ORTHO05D005019 9.1e-60 233.8 138 79.0
SEGI_17472 Sequoiadendron giganteum HOM05D001433 ORTHO05D005019 1.6e-59 233.0 138 78.3
SHI02382 Sapria himalayana HOM05D001433 ORTHO05D005019 2.6e-59 232.3 144 73.6
Pp3c5_20080 Physcomitrium patens HOM05D001433 ORTHO05D005019 4.5e-59 231.5 142 72.5
Zm00001eb156610 Zea mays HOM05D001433 ORTHO05D005019 1.0e-58 230.3 138 79.0
Pp3c14_8740 Physcomitrium patens HOM05D001433 ORTHO05D005019 1.3e-58 229.9 137 75.9
Zm00001eb295220 Zea mays HOM05D001433 ORTHO05D005019 1.1e-57 226.9 138 74.6
AagrBONN_evm.TU.Sc2ySwM_344.3239 Anthoceros agrestis HOM05D001433 ORTHO05D005019 4.2e-57 224.9 137 76.6
Pp3c10_8200 Physcomitrium patens HOM05D001433 ORTHO05D005019 7.2e-57 224.2 137 73.7
CAN.G303.50 Capsicum annuum HOM05D001433 ORTHO05D005019 9.4e-57 223.8 133 80.5
Mapoly0002s0330 Marchantia polymorpha HOM05D001433 ORTHO05D005019 1.8e-55 219.5 137 70.8
SMO302G0002 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 1.1e-54 216.9 138 74.6
SMO353G0329 Selaginella moellendorffii HOM05D001433 ORTHO05D005019 1.5e-54 216.5 138 73.9
CBR_g18717 Chara braunii HOM05D001433 ORTHO05D005019 4.4e-54 214.9 144 68.1
Gohir.A05G414000 Gossypium hirsutum HOM05D001433 ORTHO05D005019 2.8e-53 212.2 117 82.9
MCO07G759 Micromonas commoda HOM05D001433 ORTHO05D005019 1.2e-51 206.8 145 66.2
CBR_g18711 Chara braunii HOM05D001433 ORTHO05D005019 2.0e-51 206.1 137 66.4
vmacro10115 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 9.4e-49 197.2 138 68.8
CBR_g31844 Chara braunii HOM05D001433 ORTHO05D005019 2.1e-48 196.1 138 63.8
Cre13.g592200 Chlamydomonas reinhardtii HOM05D001433 ORTHO05D005019 8.0e-48 194.1 145 65.5
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 7.7e-35 151.0 85 75.3
Psat6g037200 Pisum sativum HOM05D001433 ORTHO05D005019 1.0e-34 150.6 123 60.2
vmacro06546 Vaccinium macrocarpon HOM05D001433 ORTHO05D005019 4.4e-30 135.2 74 83.8
TAR375G0942 Trochodendron aralioides HOM05D001433 ORTHO05D005019 4.9e-29 131.7 74 83.8
Haze_26266 Corylus avellana HOM05D001433 ORTHO05D005019 1.6e-27 126.7 122 47.5
Psat6g221080 Pisum sativum HOM05D007675 ORTHO05D009699 2.0e-22 109.8 106 50.9
CAN.G348.16 Capsicum annuum HOM05D001433 ORTHO05D005019 3.5e-19 99.0 120 48.3
MBI11_g24188_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D013129 1.7e-10 70.1 34 97.1
MBI11_g42958_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D013129 4.3e-09 65.5 34 94.1
CDE10G1303 Ceratophyllum demersum HOM05D001433 ORTHO05D005019 3.6e-08 62.4 74 44.6
MBI03_g15604_MAGBIO Magnolia biondii HOM05D003428 ORTHO05D013129 1.5e-06 57.0 32 87.5


User provided reference genes

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