Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 2.2e-70 268.9 139 100.0
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 3.1e-35 152.1 96 82.3
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-35 151.4 95 80.0
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-35 151.4 95 80.0
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 5.2e-35 151.4 95 80.0
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 5.2e-35 151.4 97 83.5
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 6.8e-35 151.0 95 80.0
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 6.8e-35 151.0 95 80.0
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 6.8e-35 151.0 95 78.9
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 6.8e-35 151.0 95 78.9
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 6.8e-35 151.0 94 81.9
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 6.8e-35 151.0 93 81.7
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 8.9e-35 150.6 95 82.1
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 8.9e-35 150.6 95 82.1
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 1.2e-34 150.2 95 83.2
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 2.0e-34 149.4 95 80.0
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 2.6e-34 149.1 95 82.1
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 3.4e-34 148.7 95 82.1
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 4.4e-34 148.3 110 72.7
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 4.4e-34 148.3 97 78.4
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 4.4e-34 148.3 95 80.0
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 5.8e-34 147.9 94 81.9
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 7.5e-34 147.5 95 83.2
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 7.5e-34 147.5 93 78.5
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.3e-33 146.7 95 78.9
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 1.3e-33 146.7 95 81.1
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 2.2e-33 146.0 93 81.7
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 2.2e-33 146.0 93 80.6
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 2.2e-33 146.0 96 77.1
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.9e-33 145.6 89 84.3
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 2.9e-33 145.6 95 80.0
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 4.9e-33 144.8 95 77.9
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 6.4e-33 144.4 93 76.3
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 6.4e-33 144.4 96 78.1
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 6.4e-33 144.4 96 78.1
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 6.4e-33 144.4 93 78.5
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 8.3e-33 144.1 95 80.0
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 8.3e-33 144.1 93 77.4
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 1.1e-32 143.7 95 75.8
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.1e-32 143.7 93 77.4
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 1.4e-32 143.3 107 71.0
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.4e-32 143.3 95 76.8
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.9e-32 142.9 95 77.9
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 1.9e-32 142.9 95 75.8
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 1.9e-32 142.9 95 77.9
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 1.9e-32 142.9 95 75.8
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 2.4e-32 142.5 93 75.3
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 3.2e-32 142.1 95 75.8
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 4.1e-32 141.7 95 78.9
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 4.1e-32 141.7 95 76.8
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 5.4e-32 141.4 95 73.7
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 5.4e-32 141.4 95 73.7
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 7.1e-32 141.0 94 76.6
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 7.1e-32 141.0 95 77.9
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 7.1e-32 141.0 95 74.7
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 9.2e-32 140.6 95 77.9
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 9.2e-32 140.6 95 76.8
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 9.2e-32 140.6 95 74.7
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.6e-31 139.8 95 76.8
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.1e-31 139.4 95 77.9
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 2.1e-31 139.4 95 76.8
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 2.1e-31 139.4 95 77.9
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 2.1e-31 139.4 95 76.8
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.1e-31 139.4 126 59.5
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 2.1e-31 139.4 95 77.9
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.1e-31 139.4 95 73.7
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.7e-31 139.0 102 73.5
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 3.5e-31 138.7 94 74.5
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 3.5e-31 138.7 101 72.3
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 3.5e-31 138.7 99 70.7
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 3.5e-31 138.7 94 73.4
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 4.6e-31 138.3 126 60.3
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 4.6e-31 138.3 95 74.7
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 4.6e-31 138.3 95 72.6
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 4.6e-31 138.3 95 74.7
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 6.0e-31 137.9 94 72.3
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 6.0e-31 137.9 93 76.3
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 6.0e-31 137.9 95 73.7
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 6.0e-31 137.9 96 72.9
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 7.8e-31 137.5 95 76.8
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.8e-31 137.5 96 70.8
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 7.8e-31 137.5 96 70.8
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.0e-30 137.1 95 77.9
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 1.3e-30 136.7 95 76.8
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 1.3e-30 136.7 95 76.8
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.3e-30 136.7 95 75.8
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.3e-30 136.7 94 73.4
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.3e-30 136.7 95 74.7
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 1.3e-30 136.7 95 75.8
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.7e-30 136.3 95 73.7
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 2.3e-30 136.0 101 68.3
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.3e-30 136.0 95 72.6
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 3.9e-30 135.2 94 71.3
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 3.9e-30 135.2 93 71.0
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 5.1e-30 134.8 95 76.8
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 5.1e-30 134.8 93 76.3
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 5.1e-30 134.8 92 71.7
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 5.1e-30 134.8 95 69.5
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 6.6e-30 134.4 95 73.7
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 6.6e-30 134.4 94 69.1
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 8.6e-30 134.0 95 74.7
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.6e-30 134.0 95 70.5
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 8.6e-30 134.0 79 78.5
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.1e-29 133.7 95 73.7
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 1.5e-29 133.3 101 66.3
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 1.5e-29 133.3 95 71.6
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.5e-29 133.3 95 70.5
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 2.5e-29 132.5 96 69.8
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 3.3e-29 132.1 94 71.3
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 4.3e-29 131.7 115 67.0
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 4.3e-29 131.7 95 72.6
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 4.3e-29 131.7 116 59.5
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 5.6e-29 131.3 95 74.7
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 5.6e-29 131.3 95 70.5
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 7.3e-29 131.0 95 73.7
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 9.5e-29 130.6 80 75.0
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 9.5e-29 130.6 95 69.5
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 2.1e-28 129.4 95 73.7
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 2.8e-28 129.0 79 78.5
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 3.6e-28 128.6 95 69.5
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 4.7e-28 128.3 93 68.8
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 8.1e-28 127.5 96 67.7
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 8.1e-28 127.5 81 80.2
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.1e-27 127.1 95 71.6
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.4e-27 126.7 95 70.5
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 1.4e-27 126.7 95 73.7
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 1.8e-27 126.3 95 70.5
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 1.8e-27 126.3 95 70.5
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 4.0e-27 125.2 95 68.4
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 4.0e-27 125.2 93 66.7
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 4.0e-27 125.2 94 69.1
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 8.9e-27 124.0 95 69.5
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 1.5e-26 123.2 95 68.4
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 1.5e-26 123.2 93 68.8
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 2.0e-26 122.9 94 64.9
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.6e-26 122.5 95 70.5
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 4.4e-26 121.7 93 66.7
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 5.8e-26 121.3 94 69.1
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 7.6e-26 120.9 95 68.4
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 7.6e-26 120.9 95 68.4
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 7.6e-26 120.9 77 70.1
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 1.3e-25 120.2 94 66.0
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 1.7e-25 119.8 95 64.2
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 1.7e-25 119.8 83 78.3
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 2.2e-25 119.4 84 78.6
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 3.7e-25 118.6 94 64.9
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 8.4e-25 117.5 81 70.4
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 4.1e-24 115.2 102 62.7
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 5.4e-24 114.8 93 63.4
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.7e-23 112.5 77 74.0
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 3.5e-23 112.1 96 61.5
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 1.0e-22 110.5 95 63.2
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 1.3e-22 110.2 82 70.7
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 1.3e-22 110.2 96 59.4
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 5.6e-21 104.8 97 57.7
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 5.6e-21 104.8 83 66.3
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 7.3e-21 104.4 65 76.9
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 3.6e-20 102.1 98 56.1
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.9e-19 97.4 96 55.2
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 7.6e-18 94.4 72 65.3
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 6.4e-17 91.3 99 49.5
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 8.4e-17 90.9 61 68.9
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 2.3e-14 82.8 72 62.5
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 3.0e-14 82.4 52 76.9
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.9e-13 79.7 72 52.8
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 4.3e-13 78.6 102 44.1
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 1.3e-12 77.0 99 41.4
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.3e-12 77.0 94 41.5
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 1.4e-11 73.6 71 45.1
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 1.2e-10 70.5 39 82.1
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 4.9e-09 65.1 69 46.4
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.4e-09 64.3 89 34.8
SEGI_01546 Sequoiadendron giganteum HOM05D007557 ORTHO05D009573 1.0e-06 57.4 69 40.6
SEGI_28711 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 3.0e-06 55.8 47 51.1


User provided reference genes

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