Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 1.4e-91 339.7 190 100.0
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 9.9e-61 237.3 132 87.1
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 1.7e-60 236.5 132 87.1
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 2.9e-60 235.7 132 86.4
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 6.4e-60 234.6 131 86.3
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 8.4e-60 234.2 132 84.8
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 8.4e-60 234.2 132 84.8
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 8.4e-60 234.2 132 84.8
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 1.1e-59 233.8 132 86.4
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.9e-59 233.0 129 87.6
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 4.2e-59 231.9 132 84.8
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 2.1e-58 229.6 131 84.7
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 2.1e-58 229.6 132 84.8
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 4.6e-58 228.4 132 82.6
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 4.6e-58 228.4 132 82.6
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.6e-58 228.4 132 83.3
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 4.6e-58 228.4 132 83.3
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 4.6e-58 228.4 132 83.3
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 4.6e-58 228.4 132 83.3
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 6.0e-58 228.0 132 81.8
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 7.8e-58 227.6 131 84.7
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 7.8e-58 227.6 132 83.3
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 1.0e-57 227.3 132 82.6
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.0e-57 227.3 132 82.6
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 1.3e-57 226.9 132 82.6
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.3e-57 226.9 132 83.3
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 1.7e-57 226.5 133 85.0
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 1.7e-57 226.5 131 83.2
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 2.3e-57 226.1 132 81.1
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 3.0e-57 225.7 131 82.4
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.9e-57 225.3 132 81.8
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.9e-57 225.3 132 81.8
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.9e-57 225.3 132 81.8
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 3.9e-57 225.3 132 81.8
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 6.6e-57 224.6 132 81.1
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 6.6e-57 224.6 130 83.1
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 8.7e-57 224.2 132 81.8
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 8.7e-57 224.2 132 83.3
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 8.7e-57 224.2 133 82.0
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.1e-56 223.8 132 83.3
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 1.1e-56 223.8 132 81.8
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 1.1e-56 223.8 130 83.8
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 2.5e-56 222.6 131 80.2
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 4.3e-56 221.9 129 82.9
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 7.3e-56 221.1 132 78.0
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 7.3e-56 221.1 132 81.1
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 9.6e-56 220.7 129 80.6
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 9.6e-56 220.7 133 82.7
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 1.6e-55 219.9 132 82.6
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 2.8e-55 219.2 132 79.5
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 3.6e-55 218.8 132 81.8
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 3.6e-55 218.8 132 81.8
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 3.6e-55 218.8 132 81.8
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 3.6e-55 218.8 132 81.8
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 3.6e-55 218.8 132 77.3
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 4.8e-55 218.4 131 79.4
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 6.2e-55 218.0 132 81.8
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 6.2e-55 218.0 131 80.2
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 6.2e-55 218.0 132 81.8
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 8.1e-55 217.6 132 81.1
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 8.1e-55 217.6 132 78.8
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 8.1e-55 217.6 140 77.9
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.1e-54 217.2 158 71.5
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 1.8e-54 216.5 132 76.5
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 2.4e-54 216.1 133 78.2
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 2.4e-54 216.1 132 80.3
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 2.4e-54 216.1 132 80.3
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 2.4e-54 216.1 132 80.3
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 2.4e-54 216.1 132 80.3
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 3.1e-54 215.7 132 80.3
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 5.3e-54 214.9 132 79.5
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 6.9e-54 214.5 132 80.3
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 1.5e-53 213.4 132 78.8
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.0e-53 213.0 132 79.5
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 2.0e-53 213.0 132 79.5
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 2.0e-53 213.0 132 76.5
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 2.6e-53 212.6 133 79.7
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 2.6e-53 212.6 132 76.5
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 2.6e-53 212.6 131 79.4
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 2.6e-53 212.6 131 74.0
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 3.4e-53 212.2 133 77.4
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 4.4e-53 211.8 132 76.5
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 5.8e-53 211.5 124 81.5
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 9.9e-53 210.7 140 75.0
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 1.3e-52 210.3 132 78.0
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 1.7e-52 209.9 133 75.2
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 2.2e-52 209.5 123 81.3
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 3.8e-52 208.8 132 78.8
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 4.9e-52 208.4 131 74.8
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 4.9e-52 208.4 123 82.9
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 1.1e-51 207.2 123 82.1
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.4e-51 206.1 157 70.1
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 5.4e-51 204.9 129 73.6
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.6e-50 203.4 123 78.0
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 1.6e-50 203.4 131 73.3
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 1.0e-49 200.7 127 73.2
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.7e-49 199.9 120 81.7
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.7e-49 199.9 120 81.7
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 8.7e-49 197.6 125 77.6
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 5.6e-48 194.9 131 66.4
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 5.6e-48 194.9 124 73.4
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 4.8e-47 191.8 130 75.4
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.4e-46 190.3 131 71.8
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 2.4e-46 189.5 132 72.7
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 9.9e-45 184.1 105 82.9
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 1.9e-43 179.9 121 74.4
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 7.1e-43 177.9 105 81.9
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 9.3e-43 177.6 105 81.0
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.2e-42 177.2 105 78.1
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 1.2e-42 177.2 105 78.1
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.2e-42 177.2 105 81.9
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 1.2e-42 177.2 106 82.1
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 3.0e-41 172.6 104 80.8
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 3.9e-41 172.2 138 63.8
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 2.5e-40 169.5 105 79.0
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 1.6e-39 166.8 105 79.0
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 6.2e-39 164.9 126 66.7
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 1.8e-38 163.3 115 67.0
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 2.6e-37 159.5 106 67.0
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 1.3e-36 157.1 132 61.4
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.1e-35 154.1 102 72.5
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 9.3e-35 151.0 135 63.0
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.8e-33 146.7 85 85.9
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 3.0e-33 146.0 83 88.0
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 1.5e-32 143.7 180 46.1
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.1e-30 137.5 83 81.9
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 2.6e-29 132.9 86 79.1
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 7.6e-29 131.3 83 79.5
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 2.9e-28 129.4 83 80.7
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 1.1e-27 127.5 104 57.7
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 1.4e-27 127.1 120 56.7
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 4.2e-27 125.6 132 54.5
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 7.9e-26 121.3 114 53.5
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 8.7e-25 117.9 70 75.7
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 2.5e-24 116.3 93 62.4
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 7.4e-24 114.8 93 61.3
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 9.7e-24 114.4 64 85.9
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 4.1e-22 109.0 65 78.5
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 3.2e-19 99.4 130 39.2
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 1.0e-17 94.4 55 78.2
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 2.3e-17 93.2 60 76.7
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 3.3e-16 89.4 62 71.0
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 5.7e-16 88.6 49 83.7
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 1.3e-15 87.4 48 79.2
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 2.2e-15 86.7 107 43.9
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 2.8e-15 86.3 48 77.1
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 5.3e-14 82.0 49 77.6
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 6.9e-14 81.6 72 56.9
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 2.2e-12 76.6 45 73.3
Cre16.g657000 Chlamydomonas reinhardtii HOM05D005002 ORTHO05D006016 1.4e-09 67.4 136 33.1
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 3.9e-09 65.9 82 50.0
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 3.7e-07 59.3 41 70.7
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 3.1e-06 56.2 55 52.7


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