Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 5.9e-67 257.7 159 100.0
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 4.2e-65 251.5 159 98.1
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.3e-49 197.6 159 69.2
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 7.3e-49 197.6 159 69.2
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 9.2e-44 180.6 161 62.7
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 7.8e-43 177.6 157 64.3
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 3.0e-42 175.6 157 63.7
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 3.9e-42 175.3 157 61.1
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 5.0e-42 174.9 157 63.7
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 5.6e-41 171.4 157 59.9
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 3.6e-40 168.7 159 58.5
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 6.2e-40 167.9 105 76.2
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.4e-39 166.8 107 75.7
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 1.8e-39 166.4 107 74.8
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 2.3e-39 166.0 103 75.7
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 1.2e-38 163.7 107 73.8
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 2.0e-38 162.9 107 72.0
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 4.4e-38 161.8 152 59.2
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 4.4e-38 161.8 106 71.7
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 5.8e-38 161.4 159 58.5
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 7.5e-38 161.0 152 57.9
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 9.8e-38 160.6 102 72.5
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 1.3e-37 160.2 107 72.9
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 2.2e-37 159.5 106 70.8
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 4.9e-37 158.3 161 57.8
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 6.4e-37 157.9 105 70.5
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 6.4e-37 157.9 105 73.3
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 8.3e-37 157.5 156 53.2
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 8.3e-37 157.5 104 73.1
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 8.3e-37 157.5 102 73.5
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 1.1e-36 157.1 107 69.2
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 1.1e-36 157.1 108 67.6
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 1.4e-36 156.8 105 70.5
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 1.4e-36 156.8 106 68.9
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 1.9e-36 156.4 108 69.4
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 3.2e-36 155.6 106 68.9
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 4.1e-36 155.2 105 69.5
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 4.1e-36 155.2 107 70.1
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 4.1e-36 155.2 105 68.6
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 4.1e-36 155.2 105 70.5
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 7.1e-36 154.5 107 71.0
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 7.1e-36 154.5 163 56.4
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 9.2e-36 154.1 107 68.2
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 9.2e-36 154.1 107 70.1
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 9.2e-36 154.1 107 68.2
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.2e-35 153.7 106 67.9
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 1.6e-35 153.3 105 68.6
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 1.6e-35 153.3 105 68.6
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 2.7e-35 152.5 105 68.6
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.7e-35 152.5 108 67.6
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 3.5e-35 152.1 105 67.6
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 3.5e-35 152.1 105 67.6
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 3.5e-35 152.1 105 67.6
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 3.5e-35 152.1 105 67.6
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 4.6e-35 151.8 105 67.6
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 4.6e-35 151.8 105 67.6
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 4.6e-35 151.8 105 67.6
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 6.0e-35 151.4 105 67.6
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 7.8e-35 151.0 105 67.6
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 1.0e-34 150.6 98 72.4
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.3e-34 150.2 105 68.6
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 3.0e-34 149.1 105 66.7
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 3.9e-34 148.7 107 67.3
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 5.1e-34 148.3 105 66.7
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 5.1e-34 148.3 105 65.7
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 6.6e-34 147.9 105 66.7
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 6.6e-34 147.9 105 68.6
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.1e-33 147.1 105 67.6
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.1e-33 147.1 105 67.6
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 2.5e-33 146.0 105 65.7
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 2.5e-33 146.0 123 61.8
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 3.3e-33 145.6 107 65.4
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 4.3e-33 145.2 107 64.5
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 4.3e-33 145.2 105 65.7
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 7.3e-33 144.4 104 63.5
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.2e-32 143.7 97 71.1
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.2e-32 143.7 105 61.9
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 1.2e-32 143.7 102 66.7
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 1.6e-32 143.3 157 49.7
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 1.6e-32 143.3 105 65.7
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 1.6e-32 143.3 105 65.7
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 3.6e-32 142.1 104 62.5
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.7e-32 141.7 104 62.5
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 4.7e-32 141.7 105 64.8
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 8.1e-32 141.0 105 61.0
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 8.1e-32 141.0 104 60.6
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 1.1e-31 140.6 98 68.4
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.1e-31 140.6 107 63.6
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 3.1e-31 139.0 104 63.5
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.5e-30 136.7 148 50.0
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 1.7e-29 133.3 98 62.2
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 2.2e-29 132.9 107 60.7
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 8.4e-29 131.0 106 57.5
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 1.2e-27 127.1 99 57.6
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.3e-26 123.6 152 48.0
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 1.5e-25 120.2 112 60.7
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 5.6e-25 118.2 157 45.9
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.8e-24 115.9 129 53.5
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 5.2e-23 111.7 89 57.3
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 1.5e-22 110.2 78 69.2
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 2.0e-22 109.8 79 65.8
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 4.4e-22 108.6 77 70.1
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 9.9e-22 107.5 77 67.5
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 9.9e-22 107.5 129 50.4
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 1.1e-20 104.0 77 66.2
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 1.4e-20 103.6 78 64.1
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 7.1e-20 101.3 77 62.3
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 1.6e-19 100.1 77 62.3
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 2.7e-19 99.4 89 48.3
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 2.7e-19 99.4 77 62.3
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 7.8e-19 97.8 101 46.5
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.3e-18 97.1 101 53.5
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 5.1e-18 95.1 77 58.4
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 2.5e-17 92.8 77 58.4
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 7.3e-17 91.3 69 65.2
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 2.1e-16 89.7 74 60.8
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 1.4e-15 87.0 73 57.5
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 1.4e-12 77.0 69 56.5
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 4.2e-12 75.5 57 61.4
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 2.1e-11 73.2 104 30.8


User provided reference genes

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