Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00997 Eucalyptus grandis HOM05D003766 ORTHO05D004607 0.0e+00 1193.7 758 100.0
Eucgr.B00877 Eucalyptus grandis HOM05D003766 ORTHO05D004607 2.8e-231 805.8 581 91.0
DCAR_029422 Daucus carota HOM05D003766 ORTHO05D004607 2.0e-229 799.7 671 77.2
TWI60G0360 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 2.6e-229 799.3 676 78.6
Ciclev10007659m.g Citrus clementina HOM05D003766 ORTHO05D004607 5.4e-227 791.6 671 77.9
Cpa.g.sc3.393 Carica papaya HOM05D003766 ORTHO05D004607 2.7e-226 789.3 665 77.4
MBI19_g04409_MAGBIO Magnolia biondii HOM05D003766 ORTHO05D004607 2.3e-225 786.2 653 78.1
Actinidia09075 Actinidia chinensis HOM05D003766 ORTHO05D004607 8.7e-225 784.3 676 76.3
Lj4g0008657 Lotus japonicus HOM05D003766 ORTHO05D004607 9.6e-224 780.8 667 77.2
TWI81G0458 Tripterygium wilfordii HOM05D003766 ORTHO05D004607 5.3e-222 775.0 690 75.8
Rhsim08G0126600 Rhododendron simsii HOM05D003766 ORTHO05D004607 4.9e-220 768.5 705 69.5
Migut.I00296 Erythranthe guttata HOM05D003766 ORTHO05D004607 3.5e-218 762.3 668 75.7
Lj5C158T14 Lonicera japonica HOM05D003766 ORTHO05D004607 1.3e-217 760.4 684 74.3
SalBow7G0490 Salvia bowleyana HOM05D003766 ORTHO05D004607 3.0e-217 759.2 665 76.1
Manes.06G005800 Manihot esculenta HOM05D003766 ORTHO05D004607 5.1e-217 758.4 657 77.8
Psat4g000160 Pisum sativum HOM05D003766 ORTHO05D004607 1.9e-216 756.5 679 74.2
CAN.G843.53 Capsicum annuum HOM05D003766 ORTHO05D004607 2.5e-216 756.1 675 75.3
Lalb_Chr09g0330351 Lupinus albus HOM05D003766 ORTHO05D004607 9.9e-213 744.2 673 75.0
SGA_v2.0_scaffold102G29891 Striga asiatica HOM05D003766 ORTHO05D004607 3.8e-212 742.3 684 73.4
Cc04_g06210 Coffea canephora HOM05D003766 ORTHO05D004607 6.4e-212 741.5 573 82.9
THA.LOC104813927 Tarenaya hassleriana HOM05D003766 ORTHO05D004607 8.4e-212 741.1 657 75.2
Dinv04134 Davidia involucrata HOM05D003766 ORTHO05D004607 2.4e-211 739.6 629 78.4
Prupe.5G234000 Prunus persica HOM05D003766 ORTHO05D004607 2.4e-211 739.6 668 74.1
Atru.chr9.1710 Acer truncatum HOM05D003766 ORTHO05D004607 7.1e-211 738.0 652 74.4
Duzib068G0750 Durio zibethinus HOM05D003766 ORTHO05D004607 1.2e-210 737.3 670 73.3
CSS0048248 Camellia sinensis var. sinensis HOM05D003766 ORTHO05D004607 3.5e-210 735.7 670 72.4
unitig_750.g28512 Utricularia gibba HOM05D003766 ORTHO05D004607 4.6e-210 735.3 668 72.2
Sp1g16220 Schrenkiella parvula HOM05D003766 ORTHO05D004607 6.0e-210 734.9 667 72.9
MD14G1236800 Malus domestica HOM05D003766 ORTHO05D004607 7.9e-210 734.6 670 74.0
Thhalv10006987m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.0e-209 734.2 669 72.5
FvH4_5g17420 Fragaria vesca HOM05D003766 ORTHO05D004607 3.0e-209 732.6 679 73.9
Thecc.03G055500 Theobroma cacao HOM05D003766 ORTHO05D004607 3.0e-209 732.6 654 74.3
BcaC05g25719 Brassica carinata HOM05D003766 ORTHO05D004607 3.9e-209 732.3 673 72.7
C05p16530 Brassica napus HOM05D003766 ORTHO05D004607 5.1e-209 731.9 673 72.7
MELO3C002135.2 Cucumis melo HOM05D003766 ORTHO05D004607 5.1e-209 731.9 652 77.6
PGR044G0562 Punica granatum HOM05D003766 ORTHO05D004607 5.1e-209 731.9 650 77.2
BolC5t30350H Brassica oleracea HOM05D003766 ORTHO05D004607 6.7e-209 731.5 673 72.5
FAN13G1632 Fragaria x ananassa HOM05D003766 ORTHO05D004607 8.7e-209 731.1 674 69.7
Potri.012G046300 Populus trichocarpa HOM05D003766 ORTHO05D004607 8.7e-209 731.1 684 73.2
AL1G30630 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 1.5e-208 730.3 661 73.1
A06p14270 Brassica napus HOM05D003766 ORTHO05D004607 1.5e-208 730.3 670 73.0
BraA06t24556Z Brassica rapa HOM05D003766 ORTHO05D004607 1.5e-208 730.3 670 73.0
FAN18G4514 Fragaria x ananassa HOM05D003766 ORTHO05D004607 1.5e-208 730.3 679 73.8
BcaB07g31816 Brassica carinata HOM05D003766 ORTHO05D004607 3.3e-208 729.2 670 72.8
arahy.Tifrunner.gnm1.ann1.679W5T Arachis hypogaea HOM05D003766 ORTHO05D004607 9.6e-208 727.6 689 72.3
MSTRG.11305 Avicennia marina HOM05D003766 ORTHO05D004607 1.3e-207 727.2 670 73.4
CsaV3_1G007190 Cucumis sativus L. HOM05D003766 ORTHO05D004607 1.6e-207 726.9 658 76.6
ClCG04G010600 Citrullus lanatus HOM05D003766 ORTHO05D004607 2.1e-207 726.5 652 76.4
HanXRQChr15g0492431 Helianthus annuus HOM05D003766 ORTHO05D004607 4.8e-207 725.3 651 73.7
Sed0009438 Sechium edule HOM05D003766 ORTHO05D004607 4.8e-207 725.3 668 72.8
FAN04G2446 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.2e-207 724.9 678 73.3
Nn3g18290 Nelumbo nucifera HOM05D003766 ORTHO05D004607 6.2e-207 724.9 672 73.4
RcHm_v2.0_Chr7g0178271 Rosa chinensis HOM05D003766 ORTHO05D004607 6.2e-207 724.9 680 64.1
Aqoxy3G00054 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 3.1e-206 722.6 684 67.8
Aa31LG4G3770 Aethionema arabicum HOM05D003766 ORTHO05D004607 4.0e-206 722.2 672 72.2
FAN08G2416 Fragaria x ananassa HOM05D003766 ORTHO05D004607 6.9e-206 721.5 679 67.0
AT1G18260 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.0e-205 719.9 661 72.2
Cfa019652 Carpinus fangiana HOM05D003766 ORTHO05D004607 5.8e-205 718.4 677 68.4
Potri.015G038100 Populus trichocarpa HOM05D003766 ORTHO05D004607 7.6e-205 718.0 675 73.0
CARHR018810 Cardamine hirsuta HOM05D003766 ORTHO05D004607 1.3e-204 717.2 672 71.0
Haze_18860 Corylus avellana HOM05D003766 ORTHO05D004607 3.8e-204 715.7 677 68.5
Sopen03g037630 Solanum pennellii HOM05D003766 ORTHO05D004607 4.9e-204 715.3 679 73.0
Carub.0001s1787 Capsella rubella HOM05D003766 ORTHO05D004607 8.4e-204 714.5 669 70.9
Ca_17184_v3 Cicer arietinum L. HOM05D003766 ORTHO05D004607 5.5e-203 711.8 665 72.3
Solyc03g118670.3 Solanum lycopersicum HOM05D003766 ORTHO05D004607 1.6e-202 710.3 679 72.8
Sc10g0009160 Simmondsia chinensis HOM05D003766 ORTHO05D004607 2.7e-202 709.5 673 72.8
Aa31LG7G2830 Aethionema arabicum HOM05D003766 ORTHO05D004607 6.0e-202 708.4 660 71.5
TPR.G1449 Trifolium pratense HOM05D003766 ORTHO05D004607 1.0e-201 707.6 679 68.6
arahy.Tifrunner.gnm1.ann1.G74QKM Arachis hypogaea HOM05D003766 ORTHO05D004607 3.0e-201 706.1 715 69.2
TAR622G0358 Trochodendron aralioides HOM05D003766 ORTHO05D004607 5.1e-201 705.3 653 67.1
EL10Ac8g19505 Beta vulgaris HOM05D003766 ORTHO05D004607 1.1e-200 704.1 649 73.0
Thhalv10018231m.g Eutrema salsugineum HOM05D003766 ORTHO05D004607 1.9e-200 703.4 664 71.4
Medtr8g107400 Medicago truncatula HOM05D003766 ORTHO05D004607 2.5e-200 703.0 669 71.6
AUR62043006 Chenopodium quinoa HOM05D003766 ORTHO05D004607 1.6e-199 700.3 574 79.1
Gohir.D11G002500 Gossypium hirsutum HOM05D003766 ORTHO05D004607 6.3e-199 698.4 666 73.6
Lalb_Chr05g0221621 Lupinus albus HOM05D003766 ORTHO05D004607 1.8e-198 696.8 656 70.4
QL10p029803 Quercus lobata HOM05D003766 ORTHO05D004607 2.4e-198 696.4 684 71.6
Gorai.007G003500 Gossypium raimondii HOM05D003766 ORTHO05D004607 3.1e-198 696.0 666 73.1
Glyma.08G054900 Glycine max HOM05D003766 ORTHO05D004607 4.1e-198 695.7 668 66.8
Hund06721 Selenicereus undatus HOM05D003766 ORTHO05D004607 4.1e-198 695.7 656 73.2
ECA232G0010 Erigeron canadensis HOM05D003766 ORTHO05D004607 5.3e-198 695.3 650 72.6
Gohir.A11G002900 Gossypium hirsutum HOM05D003766 ORTHO05D004607 5.3e-198 695.3 666 73.3
CARHR066590 Cardamine hirsuta HOM05D003766 ORTHO05D004607 6.9e-198 694.9 675 70.7
Aqoxy3G02431 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 1.2e-197 694.1 683 67.9
Ah.14g085990 Amaranthus hybridus HOM05D003766 ORTHO05D004607 4.5e-197 692.2 675 69.3
AUR62042013 Chenopodium quinoa HOM05D003766 ORTHO05D004607 7.6e-197 691.4 659 71.0
Sabra15G0036800 Salix brachista HOM05D003766 ORTHO05D004607 1.7e-196 690.3 673 72.2
AL2G33320 Arabidopsis lyrata HOM05D003766 ORTHO05D004607 5.0e-196 688.7 669 69.7
PSO478G2458 Papaver somniferum HOM05D003766 ORTHO05D004607 6.5e-196 688.3 683 69.5
Phvul.002G330600 Phaseolus vulgaris HOM05D003766 ORTHO05D004607 1.4e-195 687.2 641 73.5
PSO017G5688 Papaver somniferum HOM05D003766 ORTHO05D004607 4.2e-195 685.6 683 69.7
Lsat_1_v5_gn_0_34021 Lactuca sativa HOM05D003766 ORTHO05D004607 9.3e-195 684.5 654 71.9
CDE05G3381 Ceratophyllum demersum HOM05D003766 ORTHO05D004607 6.1e-194 681.8 643 72.3
GSVIVG01008448001 Vitis vinifera HOM05D003766 ORTHO05D004607 1.0e-193 681.0 557 70.9
HanXRQChr17g0545731 Helianthus annuus HOM05D003766 ORTHO05D004607 8.7e-193 677.9 624 74.0
VMungo0251G1288 Vigna mungo HOM05D003766 ORTHO05D004607 1.5e-192 677.2 666 68.3
Glyma.05G246700 Glycine max HOM05D003766 ORTHO05D004607 2.8e-191 672.9 676 70.3
Peaxi162Scf00314g00235 Petunia axillaris HOM05D003766 ORTHO05D004607 3.4e-189 666.0 680 70.7
Sabra12G0032400 Salix brachista HOM05D003766 ORTHO05D004607 6.5e-188 661.8 690 67.7
AT1G73570 Arabidopsis thaliana HOM05D003766 ORTHO05D004607 2.5e-187 659.8 669 58.9
Lj9A419T35 Lonicera japonica HOM05D003766 ORTHO05D004607 1.0e-185 654.4 659 69.3
Oeu015089.1 Olea europaea HOM05D003766 ORTHO05D004607 5.1e-185 652.1 672 69.0
Atru.chr9.1724 Acer truncatum HOM05D003766 ORTHO05D004607 5.7e-184 648.7 595 73.8
Oeu046630.1 Olea europaea HOM05D003766 ORTHO05D004607 2.9e-180 636.3 712 56.6
ATR0753G133 Amborella trichopoda HOM05D003766 ORTHO05D004607 5.5e-179 632.1 654 67.1
CiPaw.16G093700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.1e-176 624.4 666 61.9
HPP92_011105 Vanilla planifolia HOM05D003766 ORTHO05D004607 5.2e-169 599.0 668 61.4
SEGI_38105 Sequoiadendron giganteum HOM05D003766 ORTHO05D004607 1.1e-168 597.8 609 68.8
CiPaw.15G143700 Carya illinoinensis HOM05D003766 ORTHO05D004607 1.3e-167 594.3 527 78.4
Sp5g28730 Schrenkiella parvula HOM05D003766 ORTHO05D004607 4.1e-166 589.3 669 62.2
Zm00001eb011300 Zea mays HOM05D003766 ORTHO05D004607 1.6e-162 577.4 603 65.0
Mapoly0093s0082 Marchantia polymorpha HOM05D003766 ORTHO05D004607 8.0e-162 575.1 693 56.7
MD06G1227600 Malus domestica HOM05D003766 ORTHO05D004607 1.2e-154 551.2 519 76.3
Pp3c19_13490 Physcomitrium patens HOM05D003766 ORTHO05D004607 6.3e-151 538.9 602 60.0
Nitab4.5_0003401g0020 Nicotiana tabacum HOM05D003766 ORTHO05D004607 5.9e-149 532.3 667 63.7
SMO228G0037 Selaginella moellendorffii HOM05D003766 ORTHO05D004607 5.0e-148 529.3 565 61.2
Oeu026275.1 Olea europaea HOM05D003766 ORTHO05D004607 1.3e-140 504.6 508 70.1
Nitab4.5_0004556g0010 Nicotiana tabacum HOM05D003766 ORTHO05D004607 3.0e-140 503.4 722 58.6
Sed0018638 Sechium edule HOM05D003766 ORTHO05D004607 4.0e-137 493.0 512 72.1
Pp3c22_10650 Physcomitrium patens HOM05D003766 ORTHO05D004607 2.2e-135 487.3 619 55.3
Manes.06G005600 Manihot esculenta HOM05D003766 ORTHO05D004607 1.7e-132 477.6 525 70.5
HanXRQChr14g0456281 Helianthus annuus HOM05D003766 ORTHO05D004607 4.1e-126 456.4 530 61.3
TAR629G3071 Trochodendron aralioides HOM05D003766 ORTHO05D004607 1.7e-124 451.1 259 85.3
Pp3c19_15130 Physcomitrium patens HOM05D003766 ORTHO05D004607 1.6e-122 444.5 511 60.9
vmacro17777 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 7.6e-120 435.6 320 80.0
Aqoxy3G00039 Aquilegia oxysepala HOM05D003766 ORTHO05D004607 4.2e-102 376.7 460 68.9
TAR629G0485 Trochodendron aralioides HOM05D003766 ORTHO05D004607 3.9e-100 370.2 287 67.6
Carub.0002s2031 Capsella rubella HOM05D003766 ORTHO05D004607 2.5e-99 367.5 429 49.2
vmacro17776 Vaccinium macrocarpon HOM05D003766 ORTHO05D004607 2.5e-99 367.5 295 66.4
AagrBONN_evm.TU.Sc2ySwM_228.854 Anthoceros agrestis HOM05D003766 ORTHO05D004607 5.5e-94 349.7 476 54.8
COL.COLO4_04795 Corchorus olitorius HOM05D003766 ORTHO05D004607 8.4e-87 325.9 225 73.8
BcaB05g24801 Brassica carinata HOM05D003766 ORTHO05D004607 2.3e-84 317.8 247 61.9
HPP92_011088 Vanilla planifolia HOM05D003766 ORTHO05D004607 5.0e-79 300.1 304 83.9
Zm00001eb398230 Zea mays HOM05D003766 ORTHO05D004607 4.1e-73 280.4 304 54.3
BcaC04g22654 Brassica carinata HOM05D003766 ORTHO05D004607 1.7e-71 275.0 189 72.5
BolC2t09163H Brassica oleracea HOM05D003766 ORTHO05D004607 1.8e-68 265.0 319 71.5
BcaC07g36877 Brassica carinata HOM05D003766 ORTHO05D004607 2.3e-68 264.6 284 53.2
Atru.chr9.1718 Acer truncatum HOM05D003766 ORTHO05D004607 2.6e-67 261.2 216 70.4
Psat4g000240 Pisum sativum HOM05D003766 ORTHO05D004607 2.7e-61 241.1 301 49.5
BolC7t40944H Brassica oleracea HOM05D003766 ORTHO05D004607 4.1e-57 227.3 138 79.0
QL10p029813 Quercus lobata HOM05D003766 ORTHO05D004607 4.2e-54 217.2 293 46.4
Actinidia35129 Actinidia chinensis HOM05D003766 ORTHO05D004607 2.7e-48 198.0 289 77.2
C02p31190 Brassica napus HOM05D003766 ORTHO05D004607 2.2e-47 194.9 288 43.4
C09p56670 Brassica napus HOM05D003766 ORTHO05D004607 1.9e-46 191.8 111 82.9
HPP92_011087 Vanilla planifolia HOM05D003766 ORTHO05D004607 5.5e-46 190.3 226 50.4
C02p31200 Brassica napus HOM05D003766 ORTHO05D004607 7.2e-46 189.9 123 69.9
BolC1t04841H Brassica oleracea HOM05D003766 ORTHO05D004607 3.0e-44 184.5 111 80.2
QL10p030223 Quercus lobata HOM05D003766 ORTHO05D004607 5.4e-41 173.7 167 56.3
Dinv12692 Davidia involucrata HOM05D003766 ORTHO05D004607 2.7e-40 171.4 87 89.7
CBR_g40334 Chara braunii HOM05D000019 ORTHO05D000002 5.7e-35 153.7 322 55.3
Cre03.g197400 Chlamydomonas reinhardtii HOM05D003766 ORTHO05D004607 5.4e-33 147.1 552 33.5
MCO08G236 Micromonas commoda HOM05D003766 ORTHO05D004607 2.7e-32 144.8 181 47.0
Sp5g28740 Schrenkiella parvula HOM05D000408 ORTHO05D004607 3.5e-32 144.4 150 52.0
Hma1.2p1_2524F.1_g323905 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.6e-29 135.6 98 71.4
Hma1.2p1_0759F.1_g213970 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 1.0e-28 132.9 95 70.5
Hma1.2p1_0502F.1_g167690 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 2.3e-28 131.7 107 65.4
Hma1.2p1_0127F.1_g059480 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 6.8e-28 130.2 98 70.4
Cfa023117 Carpinus fangiana HOM05D016742 ORTHO05D028589 2.6e-27 128.3 545 31.6
COL.COLO4_04913 Corchorus olitorius HOM05D003766 ORTHO05D004607 4.9e-26 124.0 175 47.4
PRCOL_00002904 Prasinoderma coloniale HOM05D003766 ORTHO05D004607 6.4e-26 123.6 203 37.4
C08p01510 Brassica napus HOM05D003766 ORTHO05D004607 9.8e-19 99.8 69 66.7
BraA05t20732Z Brassica rapa HOM05D003766 ORTHO05D004607 3.0e-15 88.2 68 61.8
BolC9t56024H Brassica oleracea HOM05D021712 ORTHO05D021656 3.3e-14 84.7 64 60.9
Hma1.2p1_0478F.1_g161250 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 5.6e-14 84.0 68 63.2
Oeu002213.1 Olea europaea HOM05D003766 ORTHO05D004607 7.3e-14 83.6 157 36.9
A05p35970 Brassica napus HOM05D003766 ORTHO05D004607 9.5e-14 83.2 64 62.5
C09p31690 Brassica napus HOM05D021712 ORTHO05D021656 2.0e-11 75.5 58 60.3
A02p18780 Brassica napus HOM05D003766 ORTHO05D004607 5.8e-11 73.9 84 51.2
CBR_g40333 Chara braunii HOM05D003766 ORTHO05D004607 5.8e-11 73.9 94 45.7
A02p18790 Brassica napus HOM05D003766 ORTHO05D004607 7.5e-11 73.6 48 66.7
Hma1.2p1_0632F.1_g192420 Hydrangea macrophylla HOM05D003766 ORTHO05D004607 6.4e-10 70.5 54 63.0
BraA05t22403Z Brassica rapa HOM05D003766 ORTHO05D004607 1.6e-08 65.9 45 66.7
A02p21490 Brassica napus HOM05D021712 ORTHO05D021656 2.1e-08 65.5 69 50.7
Glyma.15G140700 Glycine max HOM05D003766 ORTHO05D004607 2.7e-08 65.1 73 49.3
A05p18420 Brassica napus HOM05D017138 ORTHO05D016749 7.8e-08 63.5 59 52.5
C07p05430 Brassica napus HOM05D003766 ORTHO05D016749 1.7e-07 62.4 49 59.2
EL10Ac8g19330 Beta vulgaris HOM05D003766 ORTHO05D004607 7.3e-06 57.0 68 52.9


User provided reference genes

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