Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.B00872 Eucalyptus grandis HOM05D003305 ORTHO05D001298 1.6e-117 426.4 257 100.0
Potri.015G040200 Populus trichocarpa HOM05D003305 ORTHO05D001298 7.2e-22 108.6 218 40.8
Sabra12G0034100 Salix brachista HOM05D003305 ORTHO05D001298 2.7e-21 106.7 269 39.0
TWI81G0813 Tripterygium wilfordii HOM05D003305 ORTHO05D001298 2.7e-21 106.7 190 45.3
Potri.012G048500 Populus trichocarpa HOM05D003305 ORTHO05D001298 4.4e-19 99.4 216 40.7
Migut.D01563 Erythranthe guttata HOM05D003305 ORTHO05D001298 1.3e-18 97.8 308 33.4
Sabra15G0056800 Salix brachista HOM05D003305 ORTHO05D001298 2.0e-16 90.5 319 32.0
Duzib268G1509 Durio zibethinus HOM05D003305 ORTHO05D001298 2.6e-16 90.1 261 34.9
Sabra15G0068400 Salix brachista HOM05D003305 ORTHO05D001298 4.5e-16 89.4 316 32.9
Actinidia39846 Actinidia chinensis HOM05D003305 ORTHO05D001298 1.3e-15 87.8 169 38.5
Cpa.g.sc3.415 Carica papaya HOM05D003305 ORTHO05D001298 2.9e-15 86.7 189 42.3
Cfa019681 Carpinus fangiana HOM05D003305 ORTHO05D001298 8.5e-15 85.1 285 36.8
Gohir.A12G161500 Gossypium hirsutum HOM05D003305 ORTHO05D001298 1.1e-14 84.7 231 36.8
Sc12g0007140 Simmondsia chinensis HOM05D003305 ORTHO05D001298 1.4e-14 84.3 288 33.3
Glyma.05G245500 Glycine max HOM05D003305 ORTHO05D001298 1.9e-14 84.0 295 30.2
Phvul.002G328400 Phaseolus vulgaris HOM05D003305 ORTHO05D001298 2.5e-14 83.6 295 31.2
Gohir.D12G164800 Gossypium hirsutum HOM05D003305 ORTHO05D001298 5.5e-14 82.4 229 35.8
Gorai.008G177600 Gossypium raimondii HOM05D003305 ORTHO05D001298 5.5e-14 82.4 229 36.7
MD06G1230400 Malus domestica HOM05D003305 ORTHO05D001298 7.2e-14 82.0 205 40.5
QL10p028134 Quercus lobata HOM05D003305 ORTHO05D001298 9.4e-14 81.6 116 46.6
Duzib251G0590 Durio zibethinus HOM05D003305 ORTHO05D001298 2.7e-13 80.1 179 39.1
MD14G1235000 Malus domestica HOM05D003305 ORTHO05D001298 3.6e-13 79.7 188 39.4
Aa31LG10G5190 Aethionema arabicum HOM05D003305 ORTHO05D001298 6.1e-13 79.0 203 37.9
Medtr8g106980 Medicago truncatula HOM05D003305 ORTHO05D001298 7.9e-13 78.6 282 33.0
SGA_v2.0_scaffold168G38497 Striga asiatica HOM05D003305 ORTHO05D001298 1.0e-12 78.2 284 32.0
VMungo0251G1191 Vigna mungo HOM05D003305 ORTHO05D001298 1.0e-12 78.2 304 31.9
AL3G31190 Arabidopsis lyrata HOM05D003305 ORTHO05D001298 1.8e-12 77.4 209 34.0
Dinv10182 Davidia involucrata HOM05D003305 ORTHO05D001298 1.8e-12 77.4 199 33.2
Thhalv10020566m.g Eutrema salsugineum HOM05D003305 ORTHO05D001298 2.3e-12 77.0 185 36.8
SGA_v2.0_scaffold171G38920 Striga asiatica HOM05D003305 ORTHO05D001298 2.3e-12 77.0 276 32.6
Gorai.012G185800 Gossypium raimondii HOM05D003305 ORTHO05D001298 3.0e-12 76.6 123 43.9
CSS0023887 Camellia sinensis var. sinensis HOM05D003305 ORTHO05D001298 3.9e-12 76.3 203 34.5
CSS0036038 Camellia sinensis var. sinensis HOM05D003305 ORTHO05D001298 3.9e-12 76.3 203 34.5
Gohir.A04G146100 Gossypium hirsutum HOM05D003305 ORTHO05D001298 6.7e-12 75.5 123 43.1
Lalb_Chr22g0353371 Lupinus albus HOM05D003305 ORTHO05D001298 6.7e-12 75.5 183 38.8
CANSAT56G3283 Cannabis sativa HOM05D003305 ORTHO05D001298 1.5e-11 74.3 213 33.3
Gohir.D04G190500 Gossypium hirsutum HOM05D003305 ORTHO05D001298 1.5e-11 74.3 123 43.1
THA.LOC104821833 Tarenaya hassleriana HOM05D003305 ORTHO05D001298 1.5e-11 74.3 138 42.8
BraA01t03706Z Brassica rapa HOM05D003305 ORTHO05D001298 2.0e-11 73.9 193 37.3
Ca_17205_v3 Cicer arietinum L. HOM05D003305 ORTHO05D001298 2.6e-11 73.6 212 32.1
Ca_25315_v3 Cicer arietinum L. HOM05D003305 ORTHO05D001298 3.3e-11 73.2 197 31.5
Aa31LG8G4890 Aethionema arabicum HOM05D003305 ORTHO05D001298 9.7e-11 71.6 194 37.6
DCAR_011326 Daucus carota HOM05D003305 ORTHO05D001298 9.7e-11 71.6 231 34.2
A01p36410 Brassica napus HOM05D003305 ORTHO05D001298 1.3e-10 71.2 193 36.3
Lj2g0013992 Lotus japonicus HOM05D003305 ORTHO05D001298 1.3e-10 71.2 169 36.7
Oeu046177.1 Olea europaea HOM05D003305 ORTHO05D001298 2.2e-10 70.5 219 33.3
BcaB04g20799 Brassica carinata HOM05D003305 ORTHO05D001298 2.8e-10 70.1 163 37.4
BcaC09g48763 Brassica carinata HOM05D003305 ORTHO05D001298 2.8e-10 70.1 193 36.3
C01p46160 Brassica napus HOM05D003305 ORTHO05D001298 2.8e-10 70.1 193 36.3
BolC1t04578H Brassica oleracea HOM05D003305 ORTHO05D001298 2.8e-10 70.1 193 36.3
Carub.0003s1775 Capsella rubella HOM05D003305 ORTHO05D001298 2.8e-10 70.1 216 35.2
CSS0006846 Camellia sinensis var. sinensis HOM05D003305 ORTHO05D001298 4.8e-10 69.3 183 31.7
Glyma.08G052600 Glycine max HOM05D003305 ORTHO05D001298 6.3e-10 68.9 300 29.7
Glyma.09G177500 Glycine max HOM05D003305 ORTHO05D001298 6.3e-10 68.9 123 36.6
Rhsim08G0132500 Rhododendron simsii HOM05D003305 ORTHO05D001298 1.8e-09 67.4 224 32.1
CiPaw.16G091800 Carya illinoinensis HOM05D003305 ORTHO05D001298 3.1e-09 66.6 148 37.8
DCAR_014730 Daucus carota HOM05D003305 ORTHO05D001298 5.3e-09 65.9 146 34.9
BolC5t32256H Brassica oleracea HOM05D003305 ORTHO05D011756 7.0e-09 65.5 234 33.8
arahy.Tifrunner.gnm1.ann1.5E7A70 Arachis hypogaea HOM05D003305 ORTHO05D001298 9.1e-09 65.1 143 34.3
BcaB02g11397 Brassica carinata HOM05D003305 ORTHO05D001298 9.1e-09 65.1 197 35.0
BcaNung05560 Brassica carinata HOM05D003305 ORTHO05D001298 9.1e-09 65.1 194 35.6
C05p35440 Brassica napus HOM05D003305 ORTHO05D001298 9.1e-09 65.1 194 35.6
Oeu026293.1 Olea europaea HOM05D003305 ORTHO05D001298 9.1e-09 65.1 183 35.0
Sp1g35590 Schrenkiella parvula HOM05D003305 ORTHO05D001298 1.2e-08 64.7 199 34.2
Lj4g0004392 Lotus japonicus HOM05D003305 ORTHO05D001298 1.6e-08 64.3 182 31.3
Carub.0001s3776 Capsella rubella HOM05D003305 ORTHO05D001298 2.0e-08 63.9 198 34.8
Duzib248G0796 Durio zibethinus HOM05D003305 ORTHO05D001298 4.5e-08 62.8 281 30.2
BcaC08g43068 Brassica carinata HOM05D003305 ORTHO05D001298 5.9e-08 62.4 235 31.5
BcaC08g43069 Brassica carinata HOM05D003305 ORTHO05D001298 5.9e-08 62.4 233 31.3
A06p04300 Brassica napus HOM05D003305 ORTHO05D001298 5.9e-08 62.4 199 34.7
BolC6t35458H Brassica oleracea HOM05D003305 ORTHO05D001298 5.9e-08 62.4 235 31.5
Nitab4.5_0004028g0030 Nicotiana tabacum HOM05D003305 ORTHO05D001298 5.9e-08 62.4 185 35.1
AT1G48620 Arabidopsis thaliana HOM05D003305 ORTHO05D001298 7.7e-08 62.0 251 32.7
Sp3g16150 Schrenkiella parvula HOM05D003305 ORTHO05D001298 7.7e-08 62.0 198 33.3
Hma1.2p1_0660F.1_g197680 Hydrangea macrophylla HOM05D003305 ORTHO05D001298 1.0e-07 61.6 227 31.3
arahy.Tifrunner.gnm1.ann1.0WKN8B Arachis hypogaea HOM05D003305 ORTHO05D001298 1.3e-07 61.2 144 33.3
AUR62013608 Chenopodium quinoa HOM05D025767 ORTHO05D027022 1.7e-07 60.8 276 31.2
BcaC05g27560 Brassica carinata HOM05D003305 ORTHO05D001298 2.2e-07 60.5 188 34.0
C06p03260 Brassica napus HOM05D003305 ORTHO05D001298 2.9e-07 60.1 234 31.2
DCAR_031739 Daucus carota HOM05D003305 ORTHO05D001298 2.9e-07 60.1 254 30.7
HanXRQChr08g0227291 Helianthus annuus HOM05D003305 ORTHO05D001298 2.9e-07 60.1 184 34.8
TPR.G8621 Trifolium pratense HOM05D003305 ORTHO05D001298 2.9e-07 60.1 81 44.4
Haze_18809 Corylus avellana HOM05D003305 ORTHO05D001298 3.8e-07 59.7 262 37.4
CARHR038230 Cardamine hirsuta HOM05D003305 ORTHO05D001298 5.0e-07 59.3 197 33.0
AL1G55280 Arabidopsis lyrata HOM05D003305 ORTHO05D001298 6.5e-07 58.9 248 30.6
Dinv18258 Davidia involucrata HOM05D003305 ORTHO05D001298 6.5e-07 58.9 247 35.6
FAN13G3137 Fragaria x ananassa HOM05D003305 ORTHO05D001298 8.5e-07 58.5 233 29.2
COL.COLO4_31503 Corchorus olitorius HOM05D003305 ORTHO05D001298 1.5e-06 57.8 158 35.4
Thhalv10011410m.g Eutrema salsugineum HOM05D003305 ORTHO05D001298 1.5e-06 57.8 196 34.7
Medtr6g079520 Medicago truncatula HOM05D003305 ORTHO05D001298 1.9e-06 57.4 73 43.8
Thecc.03G053100 Theobroma cacao HOM05D003305 ORTHO05D001298 1.9e-06 57.4 76 42.1
MSTRG.4568 Avicennia marina HOM05D003305 ORTHO05D001298 3.2e-06 56.6 302 28.8
FAN18G3362 Fragaria x ananassa HOM05D003305 ORTHO05D001298 4.2e-06 56.2 121 37.2
FAN04G1779 Fragaria x ananassa HOM05D003305 ORTHO05D001298 5.5e-06 55.8 230 29.6
Phvul.004G151300 Phaseolus vulgaris HOM05D003305 ORTHO05D001298 9.4e-06 55.1 201 29.4
VMungo0464G1650 Vigna mungo HOM05D003305 ORTHO05D001298 9.4e-06 55.1 218 31.7


User provided reference genes

Program Settings