Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02322 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.1e-147 526.6 261 100.0
Eucgr.B02734 Eucalyptus grandis HOM05D003612 ORTHO05D004323 1.0e-140 503.4 261 95.8
PGR004G2683 Punica granatum HOM05D003612 ORTHO05D004323 2.6e-88 329.3 262 63.0
Sabra17G0119100 Salix brachista HOM05D003612 ORTHO05D004323 2.0e-80 303.1 264 55.7
GSVIVG01033242001 Vitis vinifera HOM05D003612 ORTHO05D004323 2.0e-80 303.1 254 61.4
Dinv02797 Davidia involucrata HOM05D003612 ORTHO05D004323 5.9e-80 301.6 264 58.3
Gorai.002G227800 Gossypium raimondii HOM05D003612 ORTHO05D004323 2.2e-79 299.7 264 56.4
Lj2A386T88 Lonicera japonica HOM05D003612 ORTHO05D004323 2.9e-79 299.3 265 58.5
Potri.017G142200 Populus trichocarpa HOM05D003612 ORTHO05D004323 3.8e-79 298.9 261 54.0
Dinv39651 Davidia involucrata HOM05D003612 ORTHO05D004323 1.4e-78 297.0 267 59.9
CSS0036075 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 9.4e-78 294.3 264 57.6
Manes.04G104200 Manihot esculenta HOM05D003612 ORTHO05D004323 1.2e-77 293.9 269 54.6
Eucgr.A02319 Eucalyptus grandis HOM05D003612 ORTHO05D004323 2.1e-77 293.1 261 62.5
Gohir.A01G194000 Gossypium hirsutum HOM05D003612 ORTHO05D004323 3.6e-77 292.4 265 57.0
QL11p026785 Quercus lobata HOM05D003612 ORTHO05D004323 3.0e-76 289.3 267 57.7
ClCG04G006280 Citrullus lanatus HOM05D003612 ORTHO05D004323 5.1e-76 288.5 268 55.2
QL07p002913 Quercus lobata HOM05D003612 ORTHO05D004323 1.1e-75 287.3 267 58.1
Ciclev10005938m.g Citrus clementina HOM05D003612 ORTHO05D004323 2.0e-75 286.6 269 56.5
VMungo1309G0648 Vigna mungo HOM05D003612 ORTHO05D004323 4.3e-75 285.4 264 55.7
Lj1g0003709 Lotus japonicus HOM05D003612 ORTHO05D004323 9.7e-75 284.3 257 56.4
MBI16_g21161_MAGBIO Magnolia biondii HOM05D003612 ORTHO05D004323 1.7e-74 283.5 266 54.5
Cfa016791 Carpinus fangiana HOM05D003612 ORTHO05D004323 8.2e-74 281.2 268 57.5
Nitab4.5_0000082g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.4e-73 280.4 267 55.8
Hund23474 Selenicereus undatus HOM05D003612 ORTHO05D004323 1.8e-73 280.0 263 56.7
arahy.Tifrunner.gnm1.ann1.GM1CB9 Arachis hypogaea HOM05D003612 ORTHO05D004323 2.4e-73 279.6 255 55.7
arahy.Tifrunner.gnm1.ann1.65NHSX Arachis hypogaea HOM05D003612 ORTHO05D004323 4.1e-73 278.9 255 55.7
TPR.G6202 Trifolium pratense HOM05D003612 ORTHO05D004323 4.1e-73 278.9 253 55.3
Actinidia22794 Actinidia chinensis HOM05D003612 ORTHO05D004323 5.3e-73 278.5 254 56.7
CANSAT80G2682 Cannabis sativa HOM05D003612 ORTHO05D004323 5.3e-73 278.5 253 55.7
MELO3C025231.2 Cucumis melo HOM05D003612 ORTHO05D004323 5.3e-73 278.5 272 52.9
Psat3g074360 Pisum sativum HOM05D003612 ORTHO05D004323 5.3e-73 278.5 255 55.3
MD12G1080400 Malus domestica HOM05D003612 ORTHO05D004323 6.9e-73 278.1 243 58.8
Cc04_g15140 Coffea canephora HOM05D003612 ORTHO05D004323 9.1e-73 277.7 265 54.7
Prupe.7G055000 Prunus persica HOM05D003612 ORTHO05D004323 9.1e-73 277.7 266 56.4
CiPaw.09G039700 Carya illinoinensis HOM05D003612 ORTHO05D004323 1.5e-72 276.9 267 53.6
CsaV3_4G027280 Cucumis sativus L. HOM05D003612 ORTHO05D004323 1.5e-72 276.9 270 53.7
COL.COLO4_19254 Corchorus olitorius HOM05D003612 ORTHO05D004323 2.6e-72 276.2 264 54.9
Sed0024079 Sechium edule HOM05D003612 ORTHO05D004323 2.6e-72 276.2 270 53.3
TPR.G18234 Trifolium pratense HOM05D003612 ORTHO05D004323 5.9e-72 275.0 251 54.6
COL.COLO4_22302 Corchorus olitorius HOM05D003612 ORTHO05D004323 1.0e-71 274.2 264 55.3
Medtr8g090105 Medicago truncatula HOM05D003612 ORTHO05D004323 1.0e-71 274.2 271 50.9
Thecc.05G151100 Theobroma cacao HOM05D003612 ORTHO05D004323 1.7e-71 273.5 211 63.0
Nitab4.5_0010316g0020 Nicotiana tabacum HOM05D003612 ORTHO05D004323 2.5e-70 269.6 267 54.3
Rhsim04G0105800 Rhododendron simsii HOM05D003612 ORTHO05D004323 3.2e-70 269.2 267 53.9
Hund15698 Selenicereus undatus HOM05D003612 ORTHO05D004323 7.2e-70 268.1 261 54.0
Cc06_g17860 Coffea canephora HOM05D003612 ORTHO05D004323 9.4e-70 267.7 264 53.8
PGSC0003DMG400008168 Solanum tuberosum HOM05D003612 ORTHO05D004323 9.4e-70 267.7 267 54.7
Sopen10g029960 Solanum pennellii HOM05D003612 ORTHO05D004323 2.7e-69 266.2 267 54.7
Solyc10g079310.2 Solanum lycopersicum HOM05D003612 ORTHO05D004323 4.7e-69 265.4 267 54.7
SGA_v2.0_scaffold94G28492 Striga asiatica HOM05D003612 ORTHO05D004323 6.1e-69 265.0 261 52.5
TWI53G1732 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 6.1e-69 265.0 267 52.4
Nitab4.5_0000082g0220 Nicotiana tabacum HOM05D003612 ORTHO05D004323 7.9e-69 264.6 267 55.4
CAN.G641.26 Capsicum annuum HOM05D003612 ORTHO05D004323 1.0e-68 264.2 267 53.9
Lj6g0010730 Lotus japonicus HOM05D003612 ORTHO05D004323 2.3e-68 263.1 227 56.4
Phvul.007G088100 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 3.9e-68 262.3 211 60.7
vmacro09060 Vaccinium macrocarpon HOM05D003612 ORTHO05D004323 5.1e-68 261.9 264 52.7
TWI74G0690 Tripterygium wilfordii HOM05D003612 ORTHO05D004323 6.7e-68 261.5 272 50.0
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.8e-68 261.2 240 55.8
Cpa.g.sc182.7 Carica papaya HOM05D003612 ORTHO05D004323 1.1e-67 260.8 247 53.8
RcHm_v2.0_Chr3g0483371 Rosa chinensis HOM05D003612 ORTHO05D004323 1.1e-67 260.8 281 52.0
FAN02G1760 Fragaria x ananassa HOM05D003612 ORTHO05D004323 1.5e-67 260.4 240 55.8
VMungo1383G3573 Vigna mungo HOM05D003612 ORTHO05D004323 3.3e-67 259.2 248 54.4
Ca_08432_v3 Cicer arietinum L. HOM05D003612 ORTHO05D004323 5.7e-67 258.5 241 53.1
DCAR_030722 Daucus carota HOM05D003612 ORTHO05D004323 7.4e-67 258.1 266 52.3
Actinidia17229 Actinidia chinensis HOM05D003612 ORTHO05D004323 3.7e-66 255.8 231 55.0
Nitab4.5_0000912g0130 Nicotiana tabacum HOM05D003612 ORTHO05D004323 4.8e-66 255.4 265 53.2
TAR369G0285 Trochodendron aralioides HOM05D003612 ORTHO05D004323 4.8e-66 255.4 250 52.4
SalBow1G2865 Salvia bowleyana HOM05D003612 ORTHO05D004323 8.2e-66 254.6 262 52.3
Migut.B00971 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.1e-65 254.2 253 53.0
Psat7g055720 Pisum sativum HOM05D003612 ORTHO05D004323 1.8e-65 253.4 240 52.9
Oeu023123.1 Olea europaea HOM05D003612 ORTHO05D004323 5.3e-65 251.9 260 52.3
Peaxi162Scf00059g01812 Petunia axillaris HOM05D003612 ORTHO05D004323 5.3e-65 251.9 269 50.2
Oeu008170.1 Olea europaea HOM05D003612 ORTHO05D004323 1.3e-63 247.3 262 51.1
Migut.K00098 Erythranthe guttata HOM05D003612 ORTHO05D004323 1.7e-63 246.9 254 50.4
Lsat_1_v5_gn_7_11501 Lactuca sativa HOM05D000048 ORTHO05D000436 2.5e-62 243.0 233 54.5
FvH4_6g24380 Fragaria vesca HOM05D003612 ORTHO05D004323 9.4e-62 241.1 226 54.4
Aqoxy7G03834 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 2.7e-61 239.6 266 48.5
CSS0050265 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.7e-61 238.8 201 59.2
Nitab4.5_0004416g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 6.1e-61 238.4 251 52.6
Haze_19817 Corylus avellana HOM05D003612 ORTHO05D004323 8.0e-61 238.0 274 51.1
Aqoxy7G03372 Aquilegia oxysepala HOM05D003612 ORTHO05D004323 1.0e-60 237.7 261 46.0
Nn8g39441 Nelumbo nucifera HOM05D003612 ORTHO05D004323 1.8e-60 236.9 234 53.0
Haze_19820 Corylus avellana HOM05D003612 ORTHO05D004323 5.2e-60 235.3 273 50.9
HanXRQChr04g0113101 Helianthus annuus HOM05D003612 ORTHO05D004323 6.7e-60 235.0 219 53.4
Nn1g01643 Nelumbo nucifera HOM05D003612 ORTHO05D004323 8.8e-60 234.6 264 48.9
Sopen03g026320 Solanum pennellii HOM05D003612 ORTHO05D004323 1.1e-59 234.2 203 58.6
THA.LOC104802043 Tarenaya hassleriana HOM05D003612 ORTHO05D004323 1.1e-59 234.2 267 47.9
MSTRG.26129 Avicennia marina HOM05D003612 ORTHO05D004323 1.5e-59 233.8 265 47.5
Lalb_Chr20g0110641 Lupinus albus HOM05D003612 ORTHO05D004323 1.5e-59 233.8 275 47.6
Sp5g05240 Schrenkiella parvula HOM05D003612 ORTHO05D004323 3.3e-59 232.6 264 47.0
FvH4_2g14101 Fragaria vesca HOM05D003786 ORTHO05D004375 1.3e-58 230.7 243 53.1
Carub.0001s3481 Capsella rubella HOM05D003612 ORTHO05D004323 1.7e-58 230.3 263 45.6
BraA04t16040Z Brassica rapa HOM05D003612 ORTHO05D004323 2.2e-58 229.9 265 47.5
Carub.0005s2421 Capsella rubella HOM05D003612 ORTHO05D004323 2.8e-58 229.6 263 46.4
ClCG10G015700 Citrullus lanatus HOM05D003612 ORTHO05D004323 2.8e-58 229.6 244 50.4
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.8e-58 228.8 217 53.9
AT3G57360 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 1.1e-57 227.6 260 47.3
FAN24G0412 Fragaria x ananassa HOM05D003786 ORTHO05D004375 1.1e-57 227.6 243 52.7
AL5G38900 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 2.4e-57 226.5 264 47.7
Zm00001eb102310 Zea mays HOM05D003612 ORTHO05D004323 4.1e-57 225.7 234 47.4
A09p50260 Brassica napus HOM05D003612 ORTHO05D004323 5.3e-57 225.3 263 45.6
BraA09t40476Z Brassica rapa HOM05D003612 ORTHO05D004323 5.3e-57 225.3 263 45.6
Dinv02795 Davidia involucrata HOM05D003612 ORTHO05D004323 1.2e-56 224.2 192 56.8
AL3G11670 Arabidopsis lyrata HOM05D003612 ORTHO05D004323 1.6e-56 223.8 241 49.0
BcaC02g09930 Brassica carinata HOM05D003612 ORTHO05D004323 3.5e-56 222.6 263 46.8
C04p35070 Brassica napus HOM05D003612 ORTHO05D004323 3.5e-56 222.6 263 46.8
BolC4t25063H Brassica oleracea HOM05D003612 ORTHO05D004323 3.5e-56 222.6 263 46.8
Os09g0504800 Oryza sativa ssp. japonica HOM05D003612 ORTHO05D004323 3.5e-56 222.6 236 47.5
Duzib128G0868 Durio zibethinus HOM05D003612 ORTHO05D004323 4.5e-56 222.2 263 47.5
SHI13547 Sapria himalayana HOM05D003612 ORTHO05D004323 1.3e-55 220.7 268 45.9
CARHR167560 Cardamine hirsuta HOM05D003612 ORTHO05D004323 6.5e-55 218.4 263 43.3
ECA236G0894 Erigeron canadensis HOM05D003612 ORTHO05D004323 6.5e-55 218.4 250 47.6
A04p03190 Brassica napus HOM05D003612 ORTHO05D004323 1.5e-54 217.2 285 42.8
HPP92_020032 Vanilla planifolia HOM05D003612 ORTHO05D004323 1.9e-54 216.9 217 47.9
Prupe.5G048800 Prunus persica HOM05D003612 ORTHO05D004323 2.5e-54 216.5 215 51.2
Gohir.D01G184300 Gossypium hirsutum HOM05D003612 ORTHO05D004323 7.2e-54 214.9 179 58.1
C08p32750 Brassica napus HOM05D003612 ORTHO05D004323 9.4e-54 214.5 263 45.2
BolC8t50886H Brassica oleracea HOM05D003612 ORTHO05D004323 9.4e-54 214.5 263 45.2
Thhalv10006455m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 9.4e-54 214.5 263 43.7
Phvul.008G158112 Phaseolus vulgaris HOM05D003612 ORTHO05D004323 3.6e-53 212.6 216 52.3
unitig_52.g17667 Utricularia gibba HOM05D003612 ORTHO05D004323 1.0e-52 211.1 259 46.7
PSO339G0745 Papaver somniferum HOM05D003612 ORTHO05D004323 1.4e-52 210.7 232 47.8
ATR0829G008 Amborella trichopoda HOM05D003612 ORTHO05D004323 1.8e-52 210.3 299 42.1
AUR62029731 Chenopodium quinoa HOM05D003612 ORTHO05D004323 1.8e-52 210.3 273 43.6
EL10Ac6g13255 Beta vulgaris HOM05D003612 ORTHO05D004323 2.3e-52 209.9 276 43.5
Aa31LG10G12210 Aethionema arabicum HOM05D000708 ORTHO05D004323 4.0e-52 209.1 249 43.4
BcaC07g40390 Brassica carinata HOM05D003612 ORTHO05D004323 6.8e-52 208.4 211 48.8
Sc04g0007910 Simmondsia chinensis HOM05D003612 ORTHO05D004323 8.8e-52 208.0 178 56.2
PSO210G2319 Papaver somniferum HOM05D003612 ORTHO05D004323 1.5e-51 207.2 268 44.0
PSO648G0079 Papaver somniferum HOM05D003612 ORTHO05D004323 2.0e-51 206.8 264 45.1
Aa31LG1G13790 Aethionema arabicum HOM05D003612 ORTHO05D004323 3.7e-50 202.6 249 42.6
Ah.03g134750 Amaranthus hybridus HOM05D003612 ORTHO05D004323 3.1e-49 199.5 277 42.2
AUR62032829 Chenopodium quinoa HOM05D003612 ORTHO05D004323 4.1e-49 199.1 266 42.5
Sopen03g026330 Solanum pennellii HOM05D003612 ORTHO05D004323 7.0e-49 198.4 224 49.6
Thhalv10009639m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 1.6e-48 197.2 263 41.8
AT3G02370 Arabidopsis thaliana HOM05D003612 ORTHO05D004323 2.7e-48 196.4 210 48.6
Glyma.07G129400 Glycine max HOM05D003612 ORTHO05D004323 2.7e-48 196.4 271 41.3
BcaB02g08320 Brassica carinata HOM05D003612 ORTHO05D004323 3.5e-48 196.1 220 45.5
PGSC0003DMG400011936 Solanum tuberosum HOM05D003612 ORTHO05D004323 3.5e-48 196.1 180 55.6
PSO210G3983 Papaver somniferum HOM05D003612 ORTHO05D004323 7.7e-48 194.9 251 44.2
TAR369G0664 Trochodendron aralioides HOM05D003612 ORTHO05D004323 5.0e-47 192.2 171 53.8
Thhalv10008553m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 4.2e-46 189.1 211 44.5
Peaxi162Scf00244g00019 Petunia axillaris HOM05D003612 ORTHO05D004323 3.6e-45 186.0 179 53.1
BolC8t50888H Brassica oleracea HOM05D003612 ORTHO05D004323 8.0e-45 184.9 265 40.8
Thhalv10009908m.g Eutrema salsugineum HOM05D003612 ORTHO05D004323 6.8e-44 181.8 266 39.5
MD14G1076600 Malus domestica HOM05D003612 ORTHO05D004323 1.8e-41 173.7 240 42.9
CDE09G0671 Ceratophyllum demersum HOM05D003612 ORTHO05D004323 5.4e-41 172.2 235 41.7
AUR62005836 Chenopodium quinoa HOM05D000760 ORTHO05D004323 7.0e-41 171.8 245 40.8
PSO339G0740 Papaver somniferum HOM05D003612 ORTHO05D004323 5.9e-40 168.7 180 47.2
Eucgr.A02317 Eucalyptus grandis HOM05D003612 ORTHO05D004323 8.6e-39 164.9 81 96.3
Lj1C1128T4 Lonicera japonica HOM05D003612 ORTHO05D004323 1.6e-37 160.6 158 48.1
GSVIVG01033245001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.4e-36 157.5 139 57.6
SMO364G0364 Selaginella moellendorffii HOM05D003612 ORTHO05D004323 6.8e-36 155.2 221 37.1
AagrBONN_evm.TU.Sc2ySwM_368.1563 Anthoceros agrestis HOM05D003612 ORTHO05D004323 3.4e-35 152.9 302 31.8
PSO339G6630 Papaver somniferum HOM05D003612 ORTHO05D004323 1.7e-34 150.6 219 42.9
CSS0020602 Camellia sinensis var. sinensis HOM05D003612 ORTHO05D004323 4.1e-33 146.0 179 45.3
MELO3C030712.2 Cucumis melo HOM05D003612 ORTHO05D004323 5.4e-33 145.6 130 56.9
Mapoly0007s0121 Marchantia polymorpha HOM05D003612 ORTHO05D004323 7.0e-33 145.2 319 31.3
BcaNung07094 Brassica carinata HOM05D003612 ORTHO05D004323 5.9e-32 142.1 171 43.3
SGA_v2.0_scaffold1G00588 Striga asiatica HOM05D003612 ORTHO05D004323 7.8e-32 141.7 202 40.6
Ah.02g117470 Amaranthus hybridus HOM05D003612 ORTHO05D004323 4.3e-30 136.0 231 37.2
SEGI_02185 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 5.6e-30 135.6 240 36.7
Pp3c3_37380 Physcomitrium patens HOM05D003612 ORTHO05D004323 1.6e-29 134.0 217 36.4
Glyma.19G136600 Glycine max HOM05D003612 ORTHO05D004323 7.5e-27 125.2 251 33.9
Nn2g10440 Nelumbo nucifera HOM05D003612 ORTHO05D004323 2.9e-26 123.2 113 54.9
PSO339G4790 Papaver somniferum HOM05D003612 ORTHO05D004323 3.2e-25 119.8 165 43.6
Solyc03g096220.3 Solanum lycopersicum HOM05D003612 ORTHO05D004323 1.2e-24 117.9 81 66.7
Nitab4.5_0001598g0060 Nicotiana tabacum HOM05D003612 ORTHO05D004323 1.3e-23 114.4 194 37.6
RcHm_v2.0_Chr1g0361791 Rosa chinensis HOM05D003612 ORTHO05D004323 3.9e-23 112.8 116 52.6
BcaNung07092 Brassica carinata HOM05D003612 ORTHO05D004323 5.6e-22 109.0 263 31.2
C08p32770 Brassica napus HOM05D003612 ORTHO05D004323 1.6e-21 107.5 264 31.1
Duzib093G1009 Durio zibethinus HOM05D003612 ORTHO05D004323 3.4e-19 99.8 74 58.1
Peaxi162Scf00002g03215 Petunia axillaris HOM05D003612 ORTHO05D004323 3.7e-18 96.3 141 41.1
Glyma.03G134401 Glycine max HOM05D003612 ORTHO05D004323 6.0e-16 89.0 106 45.3
QL07p002858 Quercus lobata HOM05D003612 ORTHO05D004323 2.3e-15 87.0 132 40.9
CBR_g2822 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-13 81.3 163 33.1
RcHm_v2.0_Chr6g0276201 Rosa chinensis HOM05D003786 ORTHO05D004375 2.1e-13 80.5 130 42.3
Lj1A1128T58 Lonicera japonica HOM05D003612 ORTHO05D004323 4.0e-12 76.3 46 73.9
PGSC0003DMG400013536 Solanum tuberosum HOM05D003612 ORTHO05D004323 1.2e-11 74.7 87 52.9
SEGI_36865 Sequoiadendron giganteum HOM05D003612 ORTHO05D004323 1.5e-11 74.3 74 55.4
Cfa015703 Carpinus fangiana HOM05D003612 ORTHO05D004323 2.6e-11 73.6 53 64.2
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 7.6e-11 72.0 130 39.2
Lj1A1127T48 Lonicera japonica HOM05D003612 ORTHO05D004323 3.9e-07 59.7 41 63.4
CsaV3_3G040730 Cucumis sativus L. HOM05D003612 ORTHO05D004323 6.6e-07 58.9 66 50.0
Actinidia09310 Actinidia chinensis HOM05D003612 ORTHO05D004323 1.1e-06 58.2 44 61.4
GSVIVG01033244001 Vitis vinifera HOM05D003612 ORTHO05D004323 1.1e-06 58.2 57 52.6


User provided reference genes

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