Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.A02183 Eucalyptus grandis HOM05D006616 ORTHO05D008435 0.0e+00 1358.2 722 100.0
Dinv27270 Davidia involucrata HOM05D006616 ORTHO05D008435 3.1e-147 526.6 748 50.0
PGR042G1816 Punica granatum HOM05D006616 ORTHO05D008435 1.0e-145 521.5 729 49.9
Actinidia03423 Actinidia chinensis HOM05D006616 ORTHO05D008435 7.7e-138 495.4 744 47.2
GSVIVG01025818001 Vitis vinifera HOM05D006616 ORTHO05D008435 1.1e-136 491.5 510 60.2
TAR622G0026 Trochodendron aralioides HOM05D006616 ORTHO05D008435 4.3e-133 479.6 546 55.9
CSS0027023 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 3.7e-132 476.5 466 62.4
Rhsim11G0071400 Rhododendron simsii HOM05D006616 ORTHO05D008435 3.7e-132 476.5 744 47.4
Hma1.2p1_2178F.1_g316210 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 6.3e-132 475.7 472 61.9
Atru.chr1.1509 Acer truncatum HOM05D006616 ORTHO05D008435 1.8e-131 474.2 478 60.0
Prupe.7G020500 Prunus persica HOM05D006616 ORTHO05D008435 1.1e-128 464.9 474 61.2
QL07p014063 Quercus lobata HOM05D006616 ORTHO05D008435 4.2e-128 463.0 775 44.1
Potri.006G032200 Populus trichocarpa HOM05D006616 ORTHO05D008435 2.1e-127 460.7 451 59.9
MD00G1150000 Malus domestica HOM05D006616 ORTHO05D008435 4.7e-127 459.5 472 61.0
Cfa019948 Carpinus fangiana HOM05D006616 ORTHO05D008435 1.0e-126 458.4 743 46.0
Lj5g0015037 Lotus japonicus HOM05D006616 ORTHO05D008435 1.8e-126 457.6 452 62.2
Hund19065 Selenicereus undatus HOM05D006616 ORTHO05D008435 8.8e-126 455.3 747 45.8
arahy.Tifrunner.gnm1.ann1.QA0LD5 Arachis hypogaea HOM05D006616 ORTHO05D008435 3.3e-125 453.4 493 59.6
MBI16_g32949_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 7.4e-125 452.2 767 45.1
Ca_02795_v3 Cicer arietinum L. HOM05D006616 ORTHO05D008435 1.3e-124 451.4 454 61.7
TPR.G13802 Trifolium pratense HOM05D006616 ORTHO05D008435 1.7e-124 451.1 469 61.2
VMungo0720G0485 Vigna mungo HOM05D006616 ORTHO05D008435 4.8e-124 449.5 479 59.9
arahy.Tifrunner.gnm1.ann1.958W0C Arachis hypogaea HOM05D006616 ORTHO05D008435 6.3e-124 449.1 459 61.9
Gohir.A11G305800 Gossypium hirsutum HOM05D006616 ORTHO05D008435 6.3e-124 449.1 459 59.9
Manes.09G002500 Manihot esculenta HOM05D006616 ORTHO05D008435 1.1e-123 448.4 443 61.9
Phvul.007G243700 Phaseolus vulgaris HOM05D006616 ORTHO05D008435 3.1e-123 446.8 479 59.9
Duzib128G1745 Durio zibethinus HOM05D006616 ORTHO05D008435 5.3e-123 446.0 467 58.2
Aqoxy3G00148 Aquilegia oxysepala HOM05D006616 ORTHO05D008435 1.2e-122 444.9 768 45.4
TWI74G0800 Tripterygium wilfordii HOM05D006616 ORTHO05D008435 1.2e-122 444.9 459 59.5
CiPaw.10G044000 Carya illinoinensis HOM05D006616 ORTHO05D008435 1.5e-122 444.5 586 52.7
Gorai.007G351400 Gossypium raimondii HOM05D006616 ORTHO05D008435 2.6e-122 443.7 458 58.7
Lalb_Chr21g0316821 Lupinus albus HOM05D006616 ORTHO05D008435 4.5e-122 443.0 451 61.9
Thecc.05G123900 Theobroma cacao HOM05D006616 ORTHO05D008435 4.5e-122 443.0 477 57.4
Sabra06G0021500 Salix brachista HOM05D006616 ORTHO05D008435 7.7e-122 442.2 451 60.1
RcHm_v2.0_Chr3g0494671 Rosa chinensis HOM05D006616 ORTHO05D008435 1.3e-121 441.4 459 61.0
Ah.13g077310 Amaranthus hybridus HOM05D006616 ORTHO05D008435 6.5e-121 439.1 742 44.5
Nn3g18184 Nelumbo nucifera HOM05D006616 ORTHO05D008435 8.5e-121 438.7 760 45.5
MSTRG.24176 Avicennia marina HOM05D006616 ORTHO05D008435 1.1e-120 438.3 557 51.2
SGA_v2.0_scaffold25G11136 Striga asiatica HOM05D006616 ORTHO05D008435 1.1e-120 438.3 451 61.2
Oeu038315.2 Olea europaea HOM05D006616 ORTHO05D008435 1.5e-120 438.0 483 58.4
Gohir.D11G321200 Gossypium hirsutum HOM05D006616 ORTHO05D008435 3.2e-120 436.8 451 58.5
HanXRQChr05g0149371 Helianthus annuus HOM05D006616 ORTHO05D008435 3.2e-120 436.8 456 59.6
CSS0040058 Camellia sinensis var. sinensis HOM05D006616 ORTHO05D008435 4.2e-120 436.4 446 60.5
SalBow2G2978 Salvia bowleyana HOM05D006616 ORTHO05D008435 4.2e-120 436.4 468 53.2
Peaxi162Scf00066g00130 Petunia axillaris HOM05D006616 ORTHO05D008435 9.4e-120 435.3 507 57.4
ECA246G4188 Erigeron canadensis HOM05D006616 ORTHO05D008435 2.1e-119 434.1 469 57.8
CAN.G526.15 Capsicum annuum HOM05D006616 ORTHO05D008435 3.6e-119 433.3 462 60.0
Cc10_g12770 Coffea canephora HOM05D006616 ORTHO05D008435 3.6e-119 433.3 465 59.1
CANSAT78G0100 Cannabis sativa HOM05D006616 ORTHO05D008435 2.3e-118 430.6 465 58.3
Medtr1g051155 Medicago truncatula HOM05D006616 ORTHO05D008435 5.2e-118 429.5 449 61.5
Psat6g087360 Pisum sativum HOM05D006616 ORTHO05D008435 1.1e-117 428.3 457 59.3
AUR62018417 Chenopodium quinoa HOM05D006616 ORTHO05D008435 3.3e-117 426.8 763 43.8
AUR62021025 Chenopodium quinoa HOM05D006616 ORTHO05D008435 2.2e-116 424.1 761 43.1
Glyma.02G162000 Glycine max HOM05D006616 ORTHO05D008435 2.8e-116 423.7 469 58.6
Solyc11g005110.3 Solanum lycopersicum HOM05D006616 ORTHO05D008435 7.0e-115 419.1 444 60.4
Ciclev10011646m.g Citrus clementina HOM05D006616 ORTHO05D008435 1.2e-114 418.3 457 57.8
Lj7A350T24 Lonicera japonica HOM05D006616 ORTHO05D008435 3.5e-114 416.8 802 38.2
Sed0024074 Sechium edule HOM05D006616 ORTHO05D008435 1.3e-113 414.8 539 50.8
Sopen11g001110 Solanum pennellii HOM05D006616 ORTHO05D008435 2.9e-113 413.7 446 59.4
CDE04G3611 Ceratophyllum demersum HOM05D006616 ORTHO05D008435 3.8e-113 413.3 486 56.4
Migut.N03264 Erythranthe guttata HOM05D006616 ORTHO05D008435 3.8e-113 413.3 464 57.8
PSO478G1375 Papaver somniferum HOM05D006616 ORTHO05D008435 5.0e-113 412.9 459 56.6
CsaV3_3G040470 Cucumis sativus L. HOM05D006616 ORTHO05D008435 2.5e-112 410.6 511 54.0
Zm00001eb364810 Zea mays HOM05D006616 ORTHO05D008435 4.2e-112 409.8 462 57.4
Os01g0916300 Oryza sativa ssp. japonica HOM05D006616 ORTHO05D008435 1.4e-110 404.8 453 58.1
ATR0326G030 Amborella trichopoda HOM05D006616 ORTHO05D008435 4.0e-110 403.3 497 54.1
FAN26G1972 Fragaria x ananassa HOM05D006616 ORTHO05D008435 5.2e-110 402.9 461 58.1
EL10Ac3g07308 Beta vulgaris HOM05D006616 ORTHO05D008435 5.7e-109 399.4 750 43.6
HPP92_023122 Vanilla planifolia HOM05D006616 ORTHO05D008435 2.2e-108 397.5 453 58.7
Aa31LG3G1010 Aethionema arabicum HOM05D006616 ORTHO05D008435 6.3e-108 396.0 451 56.5
THA.LOC104815412 Tarenaya hassleriana HOM05D006616 ORTHO05D008435 1.1e-107 395.2 491 53.8
FAN28G1824 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.1e-107 393.3 458 58.3
DCAR_014373 Daucus carota HOM05D006616 ORTHO05D008435 3.5e-106 390.2 478 54.6
Thhalv10002504m.g Eutrema salsugineum HOM05D006616 ORTHO05D008435 2.5e-104 384.0 495 51.9
AT2G41020 Arabidopsis thaliana HOM05D006616 ORTHO05D008435 1.2e-103 381.7 458 55.9
FAN19G2668 Fragaria x ananassa HOM05D006616 ORTHO05D008435 1.2e-103 381.7 460 55.0
AL4G39000 Arabidopsis lyrata HOM05D006616 ORTHO05D008435 4.7e-103 379.8 481 53.2
Sp4g23340 Schrenkiella parvula HOM05D006616 ORTHO05D008435 2.0e-101 374.4 455 54.5
unitig_52.g17546 Utricularia gibba HOM05D006616 ORTHO05D008435 5.7e-101 372.9 471 54.6
PSO017G2359 Papaver somniferum HOM05D006616 ORTHO05D008435 1.4e-99 368.2 385 58.4
BcaC02g12875 Brassica carinata HOM05D006616 ORTHO05D008435 1.3e-97 361.7 452 54.2
C04p68740 Brassica napus HOM05D006616 ORTHO05D008435 1.1e-96 358.6 455 52.1
Carub.0004s2335 Capsella rubella HOM05D006616 ORTHO05D008435 2.5e-96 357.5 457 54.5
CARHR136140 Cardamine hirsuta HOM05D006616 ORTHO05D008435 1.2e-93 348.6 420 56.2
BraA04t18591Z Brassica rapa HOM05D006616 ORTHO05D002641 9.8e-93 345.5 449 52.6
A04p31340 Brassica napus HOM05D006616 ORTHO05D002641 1.3e-92 345.1 445 52.4
BolC4t28379H Brassica oleracea HOM05D006616 ORTHO05D008435 2.9e-92 344.0 448 51.1
Lsat_1_v5_gn_6_110180 Lactuca sativa HOM05D006616 ORTHO05D008435 1.0e-89 335.5 448 53.8
Nitab4.5_0001168g0150 Nicotiana tabacum HOM05D006616 ORTHO05D008435 2.8e-87 327.4 468 44.2
Haze_20291 Corylus avellana HOM05D006616 ORTHO05D008435 7.8e-82 309.3 1020 32.7
FvH4_1g29230 Fragaria vesca HOM05D006616 ORTHO05D008435 8.6e-81 305.8 448 51.3
ClCG10G015990 Citrullus lanatus HOM05D006616 ORTHO05D008435 1.5e-80 305.1 477 48.8
Mapoly0043s0041 Marchantia polymorpha HOM05D006616 ORTHO05D008435 2.0e-77 294.7 543 43.8
MELO3C009780.2 Cucumis melo HOM05D006616 ORTHO05D008435 4.1e-75 287.0 665 38.9
Pp3c10_1890 Physcomitrium patens HOM05D006616 ORTHO05D008435 6.2e-71 273.1 835 35.2
Pp3c10_1896 Physcomitrium patens HOM05D006616 ORTHO05D008435 6.2e-71 273.1 835 35.2
Nitab4.5_0003863g0020 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.5e-56 225.3 316 44.0
Sc13g0000840 Simmondsia chinensis HOM05D006616 ORTHO05D008435 1.2e-45 189.1 497 34.0
Hma1.2p1_2178F.1_g316200 Hydrangea macrophylla HOM05D006616 ORTHO05D008435 1.5e-45 188.7 262 44.7
AagrBONN_evm.TU.Sc2ySwM_228.200 Anthoceros agrestis HOM05D006616 ORTHO05D008435 2.1e-42 178.3 271 43.5
SEGI_15760 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.3e-41 175.6 116 77.6
SEGI_28853 Sequoiadendron giganteum HOM05D006616 ORTHO05D008435 1.9e-40 171.8 660 32.6
Nitab4.5_0003863g0030 Nicotiana tabacum HOM05D006616 ORTHO05D008435 1.6e-39 168.7 187 51.3
Cpa.g.sc33.190 Carica papaya HOM05D006616 ORTHO05D008435 4.8e-39 167.2 201 48.3
Actinidia25416 Actinidia chinensis HOM05D006616 ORTHO05D008435 1.7e-36 158.7 227 42.3
SMO339G0010 Selaginella moellendorffii HOM05D006616 ORTHO05D008435 1.3e-33 149.1 101 75.2
vmacro00862 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.1e-32 146.0 110 70.0
FAN23G2418 Fragaria x ananassa HOM05D006616 ORTHO05D008435 4.8e-31 140.6 82 89.0
COL.COLO4_33517 Corchorus olitorius HOM05D006616 ORTHO05D008435 7.6e-29 133.3 158 47.5
CBR_g8767 Chara braunii HOM05D006616 ORTHO05D008435 2.9e-28 131.3 404 37.4
Psat7g065560 Pisum sativum HOM05D006616 ORTHO05D008435 1.8e-25 122.1 142 50.7
Psat1g016240 Pisum sativum HOM05D006616 ORTHO05D008435 2.3e-25 121.7 142 50.7
SHI24850 Sapria himalayana HOM05D006616 ORTHO05D008435 3.3e-24 117.9 161 41.6
Migut.C01363 Erythranthe guttata HOM05D006616 ORTHO05D008435 9.7e-24 116.3 170 45.9
PSO478G1191 Papaver somniferum HOM05D006616 ORTHO05D008435 1.9e-19 102.1 176 48.3
Actinidia29490 Actinidia chinensis HOM05D006616 ORTHO05D008435 2.7e-18 98.2 372 28.2
vmacro00863 Vaccinium macrocarpon HOM05D006616 ORTHO05D008435 1.4e-17 95.9 363 30.3
MCO09G511 Micromonas commoda HOM05D006616 ORTHO05D008435 5.1e-17 94.0 379 36.1
Cre12.g527600 Chlamydomonas reinhardtii HOM05D006616 ORTHO05D008435 4.8e-15 87.4 56 71.4
MBI16_g47221_MAGBIO Magnolia biondii HOM05D006616 ORTHO05D008435 1.2e-13 82.8 186 39.2
BcaC02g07966 Brassica carinata HOM05D001681 ORTHO05D001589 1.9e-11 75.5 50 76.0


User provided reference genes

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