Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 8.6e-145 516.9 252 100.0
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 3.9e-113 411.8 253 76.7
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.5e-91 339.3 245 68.2
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 3.2e-91 339.0 252 65.1
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 3.0e-89 332.4 247 67.2
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 3.0e-89 332.4 244 65.2
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 6.7e-89 331.3 239 66.5
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 8.7e-89 330.9 213 71.4
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 1.1e-88 330.5 215 72.6
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 1.5e-88 330.1 253 62.5
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.9e-88 329.7 216 72.7
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.3e-88 328.9 254 63.8
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.6e-87 326.6 249 62.2
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 2.8e-87 325.9 243 63.4
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 2.8e-87 325.9 234 67.9
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 8.2e-87 324.3 218 72.5
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 1.1e-86 323.9 223 70.0
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 2.4e-86 322.8 238 66.0
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 3.1e-86 322.4 220 69.5
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 4.0e-86 322.0 224 68.3
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 6.9e-86 321.2 241 65.1
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 9.0e-86 320.9 251 63.3
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 1.2e-85 320.5 238 65.5
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.6e-85 319.3 240 65.8
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 2.6e-85 319.3 217 68.7
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 7.6e-85 317.8 243 63.8
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 7.6e-85 317.8 214 68.7
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 7.6e-85 317.8 216 69.9
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 7.6e-85 317.8 243 65.0
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 2.2e-84 316.2 216 69.4
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 4.9e-84 315.1 224 66.5
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 6.5e-84 314.7 259 62.5
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.1e-83 313.9 218 67.9
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.9e-83 313.2 251 62.5
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.9e-83 313.2 251 62.5
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 5.5e-83 311.6 220 66.4
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 5.5e-83 311.6 265 59.6
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.2e-82 310.5 238 62.6
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 2.1e-82 309.7 230 63.5
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 3.5e-82 308.9 222 65.3
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 3.5e-82 308.9 218 67.9
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.0e-81 307.4 219 64.8
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.0e-81 307.4 212 67.9
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 2.3e-81 306.2 210 68.1
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 2.3e-81 306.2 244 63.1
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 3.9e-81 305.4 220 64.5
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 5.1e-81 305.1 220 64.5
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 5.1e-81 305.1 226 63.3
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 5.1e-81 305.1 221 65.6
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 5.1e-81 305.1 215 65.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 2.5e-80 302.8 234 61.1
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 1.3e-79 300.4 229 62.4
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.3e-79 300.4 225 64.0
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 3.7e-79 298.9 232 61.6
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 1.8e-78 296.6 249 59.8
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 2.4e-78 296.2 192 70.3
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 2.4e-78 296.2 239 61.9
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 9.0e-78 294.3 217 64.5
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.5e-77 293.5 213 65.3
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 5.9e-77 291.6 231 62.8
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.0e-76 290.8 199 68.8
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 8.5e-76 287.7 198 67.2
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.1e-75 287.3 212 65.6
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 1.2e-74 283.9 197 68.0
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.6e-74 283.5 191 66.5
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 6.7e-73 278.1 204 65.7
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 4.3e-72 275.4 205 65.4
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 3.7e-71 272.3 185 70.8
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 4.8e-71 271.9 172 74.4
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.4e-70 270.4 210 60.5
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 4.1e-70 268.9 217 62.7
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.4e-67 260.4 220 58.2
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 9.4e-67 257.7 212 59.9
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 2.0e-64 250.0 195 58.5
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 2.8e-63 246.1 207 61.8
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 7.7e-61 238.0 197 55.3
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.3e-60 237.3 196 55.1
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.9e-59 233.4 203 53.2
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 3.3e-56 222.6 198 58.6
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 3.5e-53 212.6 198 50.0
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 1.0e-49 201.1 146 62.3
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 8.3e-47 191.4 241 44.8
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.0e-45 186.8 242 43.0
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 5.9e-45 185.3 133 67.7
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 4.4e-40 169.1 106 67.0
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 5.0e-36 155.6 169 50.3
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.1e-35 154.5 121 62.0
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 1.0e-33 147.9 105 66.7
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.8e-31 139.8 80 82.5
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.7e-29 133.3 124 54.8
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 1.1e-27 127.9 103 61.2
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 2.5e-27 126.7 101 63.4
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 1.5e-24 117.5 197 38.1
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 1.1e-14 84.7 63 63.5
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 1.2e-10 71.2 112 36.6
PRCOL_00002242 Prasinoderma coloniale HOM05D060700 ORTHO05D009694 4.1e-06 56.2 160 31.2


User provided reference genes

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