Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As2g23258 Beta vulgaris HOM05D002263 ORTHO05D012916 6.4e-88 327.4 167 100.0
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 3.3e-60 235.3 137 90.5
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 7.2e-31 137.9 161 53.4
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 2.2e-24 116.3 153 48.4
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 3.5e-17 92.4 165 42.4
Ah.10g038760 Amaranthus hybridus HOM05D002263 ORTHO05D003537 1.5e-15 87.0 156 43.6
Cpa.g.sc125.26 Carica papaya HOM05D002263 ORTHO05D003537 1.5e-15 87.0 118 40.7
Ah.06g183060 Amaranthus hybridus HOM05D002263 ORTHO05D003537 3.2e-15 85.9 122 43.4
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 4.7e-14 82.0 149 41.6
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 6.1e-14 81.6 122 44.3
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 3.0e-13 79.3 99 47.5
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 4.0e-13 79.0 167 36.5
ECA248G0809 Erigeron canadensis HOM05D002263 ORTHO05D003537 5.2e-13 78.6 99 45.5
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 5.2e-13 78.6 107 45.8
QL04p008589 Quercus lobata HOM05D002263 ORTHO05D003537 5.2e-13 78.6 117 42.7
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 6.7e-13 78.2 162 35.2
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 1.5e-12 77.0 102 44.1
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 3.3e-12 75.9 113 41.6
Sabra09G0043300 Salix brachista HOM05D002263 ORTHO05D003537 3.3e-12 75.9 102 44.1
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 3.3e-12 75.9 105 40.0
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 5.7e-12 75.1 121 42.1
Haze_03174 Corylus avellana HOM05D002263 ORTHO05D003537 9.7e-12 74.3 112 43.8
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 1.3e-11 73.9 144 43.1
Nn7g36257 Nelumbo nucifera HOM05D002263 ORTHO05D003537 1.3e-11 73.9 122 40.2
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 1.7e-11 73.6 117 41.0
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea HOM05D002263 ORTHO05D003537 2.2e-11 73.2 164 38.4
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 2.2e-11 73.2 118 42.4
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 2.2e-11 73.2 100 46.0
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 2.8e-11 72.8 102 41.2
Cfa010797 Carpinus fangiana HOM05D002263 ORTHO05D003537 4.8e-11 72.0 113 42.5
Hma1.2p1_2160F.1_g315590 Hydrangea macrophylla HOM05D002263 ORTHO05D012916 8.2e-11 71.2 161 36.0
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.4e-10 70.5 114 36.8
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 1.8e-10 70.1 110 41.8
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 2.4e-10 69.7 111 43.2
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.1e-10 69.3 146 35.6
COL.COLO4_15049 Corchorus olitorius HOM05D002263 ORTHO05D003537 5.3e-10 68.6 101 42.6
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 5.3e-10 68.6 130 41.5
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 5.3e-10 68.6 134 33.6
Aqoxy2G00154 Aquilegia oxysepala HOM05D002263 ORTHO05D003537 7.0e-10 68.2 120 37.5
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 7.0e-10 68.2 103 37.9
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 7.0e-10 68.2 120 35.8
Psat0s825g0040 Pisum sativum HOM05D002263 ORTHO05D003537 7.0e-10 68.2 106 43.4
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 9.1e-10 67.8 118 39.8
Actinidia19405 Actinidia chinensis HOM05D002263 ORTHO05D003537 1.6e-09 67.0 162 33.3
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 2.0e-09 66.6 166 30.1
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 2.0e-09 66.6 152 33.6
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 2.7e-09 66.2 116 39.7
HanXRQChr01g0016471 Helianthus annuus HOM05D002263 ORTHO05D003537 2.7e-09 66.2 88 44.3
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 3.5e-09 65.9 119 41.2
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 3.5e-09 65.9 153 40.5
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 4.5e-09 65.5 109 40.4
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 1.0e-08 64.3 137 37.2
QL08p003462 Quercus lobata HOM05D002263 ORTHO05D012916 1.0e-08 64.3 108 43.5
QL08p037214 Quercus lobata HOM05D002263 ORTHO05D005465 1.0e-08 64.3 108 43.5
MBI02_g23142_MAGBIO Magnolia biondii HOM05D002263 ORTHO05D012916 1.3e-08 63.9 144 37.5
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 1.7e-08 63.5 106 41.5
VMungo1080G1747 Vigna mungo HOM05D002263 ORTHO05D003537 1.7e-08 63.5 116 42.2
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 2.2e-08 63.2 97 37.1
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 2.2e-08 63.2 110 43.6
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 2.2e-08 63.2 104 38.5
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 2.2e-08 63.2 158 34.2
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 2.2e-08 63.2 118 39.0
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 2.9e-08 62.8 109 39.4
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 2.9e-08 62.8 145 36.6
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 5.0e-08 62.0 96 43.8
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 5.0e-08 62.0 97 37.1
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 6.5e-08 61.6 130 36.9
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 6.5e-08 61.6 110 39.1
QL08p031651 Quercus lobata HOM05D002263 ORTHO05D012916 8.5e-08 61.2 108 42.6
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 8.5e-08 61.2 107 40.2
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 1.1e-07 60.8 169 37.3
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 1.1e-07 60.8 105 41.0
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 1.9e-07 60.1 100 39.0
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 2.5e-07 59.7 103 47.6
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 2.5e-07 59.7 121 38.8
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 2.5e-07 59.7 108 35.2
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 5.5e-07 58.5 89 43.8
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 9.4e-07 57.8 106 41.5
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 1.6e-06 57.0 101 33.7
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 2.1e-06 56.6 107 39.3
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 2.7e-06 56.2 127 37.0
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 2.7e-06 56.2 116 33.6
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 3.6e-06 55.8 118 36.4
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 3.6e-06 55.8 146 34.9
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 4.7e-06 55.5 89 38.2
QL03p030217 Quercus lobata HOM05D000176 ORTHO05D000106 4.7e-06 55.5 105 40.0
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 4.7e-06 55.5 108 38.0
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 6.1e-06 55.1 87 37.9
Lsat_1_v5_gn_1_105720 Lactuca sativa HOM05D002263 ORTHO05D003537 6.1e-06 55.1 81 44.4
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 6.1e-06 55.1 109 37.6


User provided reference genes

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