Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10As2g23225 Beta vulgaris HOM05D000144 ORTHO05D008375 7.0e-92 340.5 160 100.0
EL10Ac6g15620 Beta vulgaris HOM05D000144 ORTHO05D008375 1.1e-68 263.5 130 94.6
Ah.03g140560 Amaranthus hybridus HOM05D000144 ORTHO05D008375 3.3e-65 251.9 130 90.0
Hund16400 Selenicereus undatus HOM05D000144 ORTHO05D008375 2.1e-64 249.2 130 88.5
Solyc02g092380.4 Solanum lycopersicum HOM05D000144 ORTHO05D008375 3.4e-62 241.9 130 86.2
Sopen02g036930 Solanum pennellii HOM05D000144 ORTHO05D008375 3.4e-62 241.9 130 86.2
Potri.005G148900 Populus trichocarpa HOM05D000144 ORTHO05D008375 7.5e-62 240.7 130 86.2
Dinv26930 Davidia involucrata HOM05D000144 ORTHO05D008375 9.8e-62 240.4 130 86.9
Nitab4.5_0000142g0040 Nicotiana tabacum HOM05D000144 ORTHO05D008375 9.8e-62 240.4 130 85.4
Lj7A97T18 Lonicera japonica HOM05D000144 ORTHO05D008375 3.7e-61 238.4 130 85.4
Cc07_g07080 Coffea canephora HOM05D000144 ORTHO05D008375 8.3e-61 237.3 130 84.6
PGSC0003DMG400021445 Solanum tuberosum HOM05D000144 ORTHO05D008375 1.4e-60 236.5 130 84.6
CAN.G1075.36 Capsicum annuum HOM05D000144 ORTHO05D008375 1.9e-60 236.1 130 83.8
Nitab4.5_0002119g0110 Nicotiana tabacum HOM05D000144 ORTHO05D008375 1.9e-60 236.1 130 83.1
Thecc.01G072500 Theobroma cacao HOM05D000144 ORTHO05D008375 1.9e-60 236.1 130 85.4
Ca_24694_v3 Cicer arietinum L. HOM05D000144 ORTHO05D008375 2.4e-60 235.7 130 85.4
ECA246G5277 Erigeron canadensis HOM05D000144 ORTHO05D008375 2.4e-60 235.7 130 85.4
Sabra05G0118600 Salix brachista HOM05D000144 ORTHO05D008375 3.2e-60 235.3 130 84.6
Cfa004131 Carpinus fangiana HOM05D000144 ORTHO05D008375 4.1e-60 235.0 130 85.4
Haze_15284 Corylus avellana HOM05D000144 ORTHO05D008375 4.1e-60 235.0 130 85.4
Gohir.D12G075500 Gossypium hirsutum HOM05D000144 ORTHO05D008375 4.1e-60 235.0 130 84.6
Gorai.008G083600 Gossypium raimondii HOM05D000144 ORTHO05D008375 4.1e-60 235.0 130 84.6
Ciclev10025214m.g Citrus clementina HOM05D000144 ORTHO05D008375 5.4e-60 234.6 130 84.6
Gohir.A12G077300 Gossypium hirsutum HOM05D000144 ORTHO05D008375 5.4e-60 234.6 130 83.8
Atru.chr3.1009 Acer truncatum HOM05D000144 ORTHO05D008375 9.2e-60 233.8 130 83.8
COL.COLO4_11575 Corchorus olitorius HOM05D000144 ORTHO05D008375 1.6e-59 233.0 130 84.6
Lsat_1_v5_gn_3_86200 Lactuca sativa HOM05D000144 ORTHO05D008375 1.6e-59 233.0 130 83.8
VMungo1215G0773 Vigna mungo HOM05D000144 ORTHO05D008375 1.6e-59 233.0 130 84.6
CSS0036973 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D008375 2.1e-59 232.6 130 84.6
arahy.Tifrunner.gnm1.ann1.ZP9CR3 Arachis hypogaea HOM05D000144 ORTHO05D008375 2.7e-59 232.3 130 84.6
HanXRQChr15g0472631 Helianthus annuus HOM05D000144 ORTHO05D008375 3.5e-59 231.9 130 84.6
SalBow3G3765 Salvia bowleyana HOM05D000144 ORTHO05D008375 3.5e-59 231.9 130 83.1
MSTRG.23672 Avicennia marina HOM05D000144 ORTHO05D008375 7.8e-59 230.7 130 83.8
Nn5g30589 Nelumbo nucifera HOM05D000144 ORTHO05D008375 7.8e-59 230.7 130 85.4
TWI09G0055 Tripterygium wilfordii HOM05D000144 ORTHO05D008375 7.8e-59 230.7 130 84.6
Hma1.2p1_0852F.1_g228500 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 1.0e-58 230.3 130 83.8
PSO541G5893 Papaver somniferum HOM05D000144 ORTHO05D008375 1.0e-58 230.3 130 83.8
PSO675G3797 Papaver somniferum HOM05D000144 ORTHO05D008375 1.0e-58 230.3 130 83.8
TAR381G1456 Trochodendron aralioides HOM05D000144 ORTHO05D008375 1.7e-58 229.6 130 83.8
Glyma.01G194100 Glycine max HOM05D000144 ORTHO05D008375 2.3e-58 229.2 130 83.8
vmacro05409 Vaccinium macrocarpon HOM05D000144 ORTHO05D008375 2.3e-58 229.2 131 83.2
Lalb_Chr16g0378861 Lupinus albus HOM05D000144 ORTHO05D008375 3.0e-58 228.8 130 83.1
TWI73G1111 Tripterygium wilfordii HOM05D000144 ORTHO05D008375 3.0e-58 228.8 130 81.5
Phvul.002G010800 Phaseolus vulgaris HOM05D000144 ORTHO05D008375 3.9e-58 228.4 130 83.1
Glyma.11G047800 Glycine max HOM05D000144 ORTHO05D008375 5.1e-58 228.0 130 83.8
Psat2g171520 Pisum sativum HOM05D000144 ORTHO05D008375 5.1e-58 228.0 130 83.8
Sed0012214 Sechium edule HOM05D000144 ORTHO05D008375 5.1e-58 228.0 130 81.5
arahy.Tifrunner.gnm1.ann1.L6JH5D Arachis hypogaea HOM05D000144 ORTHO05D008375 8.6e-58 227.3 130 83.8
Eucgr.I00705 Eucalyptus grandis HOM05D000144 ORTHO05D008375 8.6e-58 227.3 130 83.8
Medtr5g015500 Medicago truncatula HOM05D000144 ORTHO05D008375 8.6e-58 227.3 130 83.1
THA.LOC104827618 Tarenaya hassleriana HOM05D000144 ORTHO05D008375 8.6e-58 227.3 130 82.3
MELO3C007631.2 Cucumis melo HOM05D000144 ORTHO05D008375 1.1e-57 226.9 130 82.3
CsaV3_6G044090 Cucumis sativus L. HOM05D000144 ORTHO05D008375 1.1e-57 226.9 130 82.3
Actinidia36432 Actinidia chinensis HOM05D000144 ORTHO05D008375 1.5e-57 226.5 130 81.5
ClCG01G017550 Citrullus lanatus HOM05D000144 ORTHO05D008375 1.5e-57 226.5 130 81.5
SGA_v2.0_scaffold15G07454 Striga asiatica HOM05D000144 ORTHO05D008375 1.5e-57 226.5 130 82.3
Oeu014248.1 Olea europaea HOM05D000144 ORTHO05D008375 1.9e-57 226.1 130 83.1
A06p32890 Brassica napus HOM05D000144 ORTHO05D008375 2.5e-57 225.7 130 82.3
BolC3t18222H Brassica oleracea HOM05D000144 ORTHO05D008375 2.5e-57 225.7 130 82.3
BraA06t26220Z Brassica rapa HOM05D000144 ORTHO05D008375 2.5e-57 225.7 130 82.3
GSVIVG01000108001 Vitis vinifera HOM05D000144 ORTHO05D008375 2.5e-57 225.7 130 81.5
Cpa.g.sc6.18 Carica papaya HOM05D000144 ORTHO05D008375 3.3e-57 225.3 134 79.9
Thhalv10003864m.g Eutrema salsugineum HOM05D000144 ORTHO05D008375 3.3e-57 225.3 130 82.3
Os03g0201100 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D008375 3.3e-57 225.3 132 80.3
HPP92_024498 Vanilla planifolia HOM05D000144 ORTHO05D008375 3.3e-57 225.3 130 82.3
BcaB02g09915 Brassica carinata HOM05D000144 ORTHO05D008375 4.3e-57 224.9 130 82.3
CiPaw.01G004600 Carya illinoinensis HOM05D000144 ORTHO05D008375 5.6e-57 224.6 130 82.3
C03p59580 Brassica napus HOM05D000144 ORTHO05D008375 7.3e-57 224.2 130 81.5
CARHR280050 Cardamine hirsuta HOM05D000144 ORTHO05D008375 7.3e-57 224.2 130 81.5
PGR004G0927 Punica granatum HOM05D000144 ORTHO05D008375 7.3e-57 224.2 130 81.5
Prupe.6G220900 Prunus persica HOM05D000144 ORTHO05D008375 1.2e-56 223.4 130 80.0
TPR.G34857 Trifolium pratense HOM05D000144 ORTHO05D008375 1.6e-56 223.0 130 82.3
AL8G43770 Arabidopsis lyrata HOM05D000144 ORTHO05D008375 2.1e-56 222.6 130 81.5
AT5G67530 Arabidopsis thaliana HOM05D000144 ORTHO05D008375 2.1e-56 222.6 130 81.5
MD02G1185800 Malus domestica HOM05D000144 ORTHO05D008375 2.1e-56 222.6 130 80.0
Sp2g29120 Schrenkiella parvula HOM05D000144 ORTHO05D008375 2.8e-56 222.2 130 81.5
Carub.0008s2694 Capsella rubella HOM05D000144 ORTHO05D008375 3.6e-56 221.9 130 81.5
RcHm_v2.0_Chr2g0108011 Rosa chinensis HOM05D000144 ORTHO05D008375 3.6e-56 221.9 130 78.5
Zm00001eb007780 Zea mays HOM05D000144 ORTHO05D008375 6.2e-56 221.1 130 79.2
Aqoxy6G02612 Aquilegia oxysepala HOM05D000144 ORTHO05D008375 1.1e-55 220.3 130 80.0
Lj2g0027160 Lotus japonicus HOM05D000144 ORTHO05D008375 1.4e-55 219.9 130 80.0
MD15G1307700 Malus domestica HOM05D000144 ORTHO05D008375 1.4e-55 219.9 130 80.0
Manes.12G114000 Manihot esculenta HOM05D000144 ORTHO05D008375 1.4e-55 219.9 130 82.3
CDE07G1536 Ceratophyllum demersum HOM05D000144 ORTHO05D008375 2.3e-55 219.2 130 78.5
Migut.H00349 Erythranthe guttata HOM05D000144 ORTHO05D008375 8.9e-55 217.2 130 78.5
Aa31LG1G16080 Aethionema arabicum HOM05D000144 ORTHO05D008375 1.2e-54 216.9 130 80.0
FAN19G2025 Fragaria x ananassa HOM05D000144 ORTHO05D008375 1.2e-54 216.9 130 78.5
FvH4_1g17680 Fragaria vesca HOM05D000144 ORTHO05D008375 2.6e-54 215.7 130 77.7
FAN26G3316 Fragaria x ananassa HOM05D000144 ORTHO05D008375 2.6e-54 215.7 130 77.7
FAN28G1584 Fragaria x ananassa HOM05D000144 ORTHO05D008375 2.6e-54 215.7 130 77.7
Mapoly0005s0265 Marchantia polymorpha HOM05D000144 ORTHO05D008375 3.4e-54 215.3 130 77.7
unitig_699.g19438 Utricularia gibba HOM05D000144 ORTHO05D008375 5.8e-54 214.5 138 74.6
ATR1153G005 Amborella trichopoda HOM05D000144 ORTHO05D008375 1.3e-53 213.4 130 76.9
AagrBONN_evm.TU.Sc2ySwM_368.588 Anthoceros agrestis HOM05D000144 ORTHO05D008375 2.2e-53 212.6 130 76.2
SMO356G0468 Selaginella moellendorffii HOM05D000144 ORTHO05D008375 1.4e-52 209.9 130 72.3
AUR62040239 Chenopodium quinoa HOM05D000144 ORTHO05D008375 9.2e-52 207.2 130 76.9
Pp3c18_21660 Physcomitrium patens HOM05D000144 ORTHO05D008375 2.3e-50 202.6 130 70.0
Peaxi162Scf00548g00659 Petunia axillaris HOM05D000144 ORTHO05D008375 6.6e-50 201.1 130 73.8
Oeu013322.1 Olea europaea HOM05D000144 ORTHO05D008375 4.7e-48 194.9 193 54.9
Rhsim10G0099600 Rhododendron simsii HOM05D000144 ORTHO05D008375 2.0e-46 189.5 130 72.3
Actinidia11983 Actinidia chinensis HOM05D000144 ORTHO05D008375 2.2e-45 186.0 165 60.6
CBR_g31965 Chara braunii HOM05D000144 ORTHO05D008375 2.1e-43 179.5 120 66.7
MCO14G312 Micromonas commoda HOM05D000144 ORTHO05D008375 3.0e-42 175.6 130 63.8
Hma1.2p1_0852F.1_g228490 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 5.1e-42 174.9 100 82.0
Cre10.g457000 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D008375 1.1e-41 173.7 130 60.8
GSVIVG01000117001 Vitis vinifera HOM05D000144 ORTHO05D008375 4.7e-40 168.3 100 78.0
FAN23G2810 Fragaria x ananassa HOM05D000144 ORTHO05D008375 1.4e-36 156.8 130 61.5
Sc16g0002880 Simmondsia chinensis HOM05D000144 ORTHO05D008375 1.1e-33 147.1 93 75.3
DCAR_025800 Daucus carota HOM05D000144 ORTHO05D008375 7.1e-28 127.9 175 45.1
SEGI_30666 Sequoiadendron giganteum HOM05D000144 ORTHO05D008375 2.5e-25 119.4 65 81.5
AUR62004008 Chenopodium quinoa HOM05D000144 ORTHO05D008375 2.0e-22 109.8 130 47.7
PRCOL_00004771 Prasinoderma coloniale HOM05D000144 ORTHO05D008375 3.9e-18 95.5 109 42.2
MBI12_g04926_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D008375 8.7e-18 94.4 62 72.6
MBI12_g43206_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D008375 8.7e-18 94.4 62 72.6
Lj3g0021449 Lotus japonicus HOM05D000144 ORTHO05D008375 3.7e-16 89.0 61 70.5
Lsat_1_v5_gn_8_75860 Lactuca sativa HOM05D000144 ORTHO05D008375 3.1e-15 85.9 41 90.2
Hma1.2p1_0852F.1_g228510 Hydrangea macrophylla HOM05D000144 ORTHO05D008375 1.4e-07 60.5 30 90.0


User provided reference genes

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